LOCUS       NM_001309233            2103 bp    mRNA    linear   ROD 07-AUG-2024
DEFINITION  Mus musculus leucine rich repeat containing 31 (Lrrc31), mRNA.
ACCESSION   NM_001309233 XR_389644 XR_400722
VERSION     NM_001309233.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ052990.1, AK136409.1, AC120377.25 and BB704012.1.
            
            On or before May 21, 2015 this sequence version replaced
            XR_389644.2, XR_400722.2.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMN00849374, SAMN00849376
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                CJ052990.1         3-62
            61-61               AK136409.1         42-42
            62-259              CJ052990.1         64-261
            260-1105            AK136409.1         241-1086
            1106-1273           AC120377.25        23891-24058
            1274-1690           AC120377.25        25621-26037
            1691-2103           BB704012.1         94-506
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 14.27 cM"
     gene            1..2103
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /note="leucine rich repeat containing 31"
                     /db_xref="GeneID:320352"
                     /db_xref="MGI:MGI:2443864"
     exon            1..145
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1617
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 31"
                     /protein_id="NP_001296162.1"
                     /db_xref="GeneID:320352"
                     /db_xref="MGI:MGI:2443864"
                     /translation="MACIELPKVKPGRDKPGVMPLDLEMDLKSNMEDSDWFLRKLCGR
                     AADTGLDLNSYGLTAVDVKETDLEELDVSWNDFARGALHMLTQQMHPVNKLKVLRLSS
                     CRLTTEDVQTLGGALEMTPELEELSLSWNSQVGGKLPRVLHTFQQGSKIRTLELVDCA
                     LTSQDGVFVGHLLPKLQSLQVFDLSNNRNIGSCLEVIAQGLRSASGLKELKLRSCGLS
                     QKSIRLLDGVFASLDVLRILDLSCNKELGGGFEDVPAQLASLKHLEVLDLHQCSLTAG
                     DVTSLTQIIPLLSNLEELDLSSNRDVGGSSENLLCRLRFLPALKSLLINSCALQSEAF
                     AALADASVYLPALEILNLSWNKCVGGNLELLQQTLHLSRLLRVLRLSSCSLVTEDVVL
                     LASVIQSGHLATLQKLDLSYNDGICDAGWAILCQNLCFLKELTELDISLRPSSSQDCG
                     QWFSHLLCAVTQLPVITEIEMRRWVIPALQERELDCFTQDHQREIRFDHGGFQRAAL"
     exon            146..289
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            290..433
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            434..601
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            602..769
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            770..937
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            938..1105
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1106..1273
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..2103
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1721..1726
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /note="hexamer: ATTATA"
     polyA_site      1748
                     /gene="Lrrc31"
                     /gene_synonym="E230002P03Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggagttggag tcagtgtgtt caggaggagg ggaaaaaaac acaaaacaaa aagccaagaa
       61 cggaaaccat ttcctgagcc agctctcaag aaaatggcct gcatagaact tccaaaggtg
      121 aaacccggta gagacaagcc tggagttatg cctcttgact tagaaatgga cctgaaatcc
      181 aatatggaag acagtgactg gttcctgagg aagctgtgtg gaagggctgc tgacacgggt
      241 ctagacttga acagctatgg attaacagca gtggatgtga aggaaactga cttggaagaa
      301 ctggacgttt cctggaacga ttttgccagg ggggccctcc acatgctcac tcagcaaatg
      361 catcctgtca acaagttaaa agtcctgagg ctgagtagct gcagactaac cactgaggac
      421 gttcaaacac tgggaggtgc ccttgaaatg acacctgaac tcgaagaact aagtctgtcg
      481 tggaacagcc aggtgggagg gaagttgcct cgggttctcc acacattcca acaagggagc
      541 aagattcgaa cacttgaact tgtggactgt gccctcacgt cacaggacgg agtgtttgtg
      601 ggtcacttgc tacccaagct gcagagcctc caagtatttg acctttccaa caacagaaat
      661 attggcagct gtctagaggt catagcgcaa ggattaagaa gtgcatcagg cctaaaggaa
      721 ctgaagttgc gttcctgtgg attatcccaa aagagcatca gactactgga tggtgtcttt
      781 gcatccttgg atgtgctgag gatactggac ctctcctgca acaaggaact gggtggaggc
      841 tttgaggatg tgcctgctca gctggcatca ctgaagcatc tggaagtcct ggaccttcac
      901 cagtgctcac tgacagcagg agatgtgaca tcattgactc agattatccc tttactctcc
      961 aacctggaag aactggactt gtcatccaac agagacgtgg gcggctcctc agagaaccta
     1021 ctctgcaggc tccggttttt accagcactg aagtccttgc tgattaacag ttgtgcttta
     1081 caaagcgagg ctttcgcagc ccttgcagac gcctctgtgt acctcccagc cctggagata
     1141 ctcaaccttt cctggaataa gtgtgttggt gggaacctgg agctgcttca acaaacacta
     1201 catttgtcaa ggttgcttcg agtgctacgt ctgagcagct gctccctggt gacagaggat
     1261 gtggttctcc tggcctctgt catacagtca ggtcatttag cgacactaca gaagcttgac
     1321 ctgagctaca atgacggtat ctgtgatgca ggatgggcca tcctctgcca aaacctctgc
     1381 tttcttaaag agctaactga actagacatt agccttcgac cctcaagctc ccaagattgt
     1441 ggacaatggt ttagccactt actatgtgct gtgacccaac ttcctgtgat cactgagata
     1501 gagatgagaa gatgggtcat cccagccctc caggaaagag aactagactg cttcacccag
     1561 gaccaccaaa gggagattcg atttgaccac ggtgggtttc agcgtgctgc tttgtaaaca
     1621 atgaacaact ccccaaagga gaacactgtg aacgaatcct gccgccagct gtgctcagcc
     1681 tgtagttgtt tagtagcttt tgtgttgtaa aatttttgta attatatgta cataacagtg
     1741 gttctcaatc aaggctcatg atacctttga gggtcaaatg accctttcac aggggtcaca
     1801 tatcacacat cctgcatgtc agatatctac attataatcc acaacagtag cagaattata
     1861 ggtatgaagt agcaataaaa taatttatgg ttgagggggt catcaaaaca tgaagaacct
     1921 gtgttaaagg gtctcactag gaaatttgag ccaggtgtgg tggcgcacgc ctttaatccc
     1981 agcacttggg aggcagaggc aggtggattt ctgagttcga ggccagcctg gtctacaaag
     2041 tgagttccag gacagccagg gctatacaga gaaaccctgt ctcaacaaaa acaaaacaac
     2101 aac
//
