LOCUS       XM_006512364            3797 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus leucine rich repeat containing 2 (Lrrc2),
            transcript variant X1, mRNA.
ACCESSION   XM_006512364
VERSION     XM_006512364.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000075.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006512364.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3797
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="9"
     gene            1..3797
                     /gene="Lrrc2"
                     /gene_synonym="2400002D05Rik; 4933431K03Rik"
                     /note="leucine rich repeat containing 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 10 ESTs, 39 long SRA reads, and 90% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 11 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:74249"
                     /db_xref="MGI:MGI:1921499"
     CDS             778..1917
                     /gene="Lrrc2"
                     /gene_synonym="2400002D05Rik; 4933431K03Rik"
                     /codon_start=1
                     /product="leucine-rich repeat-containing protein 2 isoform
                     X1"
                     /protein_id="XP_006512427.1"
                     /db_xref="GeneID:74249"
                     /db_xref="MGI:MGI:1921499"
                     /translation="MLLPKWDTKWSCLTSLLSEPYGKLVSRSTKHGRRRRQKGWRKAP
                     WRSIFWIKEEWDFVAECRRKGVPQAEYCKNGFVDTSTRLLEKIERNSVSRQSARVKDR
                     DKRRSPFVFELSGTQWKELPDSLKEQTHLKEWYIHSTLIQIIPTYIELFQAMKILDLP
                     KNQITCLPAEIGRLKNLKELNVSFNHLKSIPPELGDCEHLERLDCSGNLDLMDLPFEL
                     SNLKQVTFVDISANKFSSVPICVLRMCRLQWLDISSNNLSDLPQDIDRLEELQGFLLY
                     KNKLTYLPQAMLNLKKLTLLVVSGDHLVEVPTALCDASTPLKFVSLVDNPIDKTGCQD
                     TEDTVESERDRQHFDKEFMKAYIEDLKEREAVPSYTTKVSFSLQL"
ORIGIN      
        1 ctctgccttc caagttcaag tataatgggt ctgctccagg actccaggtt caaaccaagg
       61 tgtgtgagga gcccttgcct gagagcagat tggagttcca ttatttattg gatgtcattc
      121 ctgtgtctgc catcaatcag caagactatt tccacaggta gcaaactctc taaagactaa
      181 actattgcat ttaaggatac agcgaacaag caagcaaaca gacaaaaacc atgtggggat
      241 gaaatctaga ctttcagtgt atcgctccaa acattgcaga aaatgttttt gttttttttt
      301 tttttttttt ttttttttac atatccttga tcccttccta gggcctttct aatcctgtct
      361 cttgcttggc tcctagtcct gagacctcag aatgcttttc cctcggcggc tctgtttttc
      421 tctgttctcc caggctttcc ttgctgcgaa gagccagcct tctgtggaag cgcgcagggg
      481 atcctgcatg cccagctcac ttaataatct tgctgtgccc ggttgccaag ccctccccga
      541 ccagatctgt tttgtctcct gctaggctga gtcacataga atagatagat agtttatcag
      601 cacatgtcct ccagatcata ttatccgctt acaaatatag cctgttagcg cacaggcacg
      661 gtagcccttc cgctgggggt gttgttctgc gggcgtaaac agcatcgaaa acggattaca
      721 gagtggcggc cacaaccggg tactgtcagc gcccactctc acagggaagg taactttatg
      781 ctgctcccca aatgggacac aaagtggtcg tgtttgacat ctctgttgtc agagccttat
      841 gggaaactcg tgtcaagaag cacaaagcat ggcagaagaa ggaggcagaa aggctggaga
      901 aaagcgccct ggagaagtat attttggata aaggaggagt gggactttgt ggccgagtgc
      961 aggaggaagg gcgtgcccca ggctgagtac tgcaagaatg gctttgtgga caccagcaca
     1021 aggctcctgg aaaagataga gaggaactct gtttccaggc agagtgcgcg agtcaaggac
     1081 agagacaaac ggaggagtcc atttgtgttt gaactttcag ggacacagtg gaaggagctg
     1141 cctgattcgc tgaaggagca gacacacctc aaagaatggt acattcacag taccctcatt
     1201 cagatcattc ccacgtacat cgagctgttt caagccatga aaattttgga tttgccaaaa
     1261 aaccaaatca cgtgtcttcc agctgaaatt ggtcgcttaa agaacctgaa agaactcaat
     1321 gtgagtttta accatttgaa gagtattccc ccggagctag gagactgtga gcatctagag
     1381 agactggact gttctgggaa tctggacctg atggatctcc cctttgaatt aagtaatttg
     1441 aagcaagtta catttgtgga tatctctgcg aacaagttct ccagcgttcc tatctgtgtc
     1501 ctgcggatgt gtcgtctgca gtggctggat atcagcagca acaatctgag tgacctgcca
     1561 caagatatag acaggctgga agagctacaa ggtttcctgc tgtataaaaa caagctgacc
     1621 taccttcctc aagccatgct caacctcaaa aagctcacct tgctggttgt cagtggggat
     1681 cacctggtgg aggtcccgac cgccctctgc gatgcctcca cgcctttgaa atttgtaagc
     1741 cttgtggaca atcccattga taagaccgga tgtcaagaca ctgaagacac agtagagagc
     1801 gagcgggacc gccagcattt tgataaggaa tttatgaaag catatattga agaccttaaa
     1861 gaaagagaag ctgttcccag ttatacgacc aaagtgtcat ttagtcttca gctttgattc
     1921 ggttcaccag aagatgacaa aaatcttact gccccgtgct ctaaatcttt gaatatgtgt
     1981 tacctcttat tggaattgcg gcttgtgctt aaggacaaag tctagaaact actaccatca
     2041 tcactgttaa gaaagataac attcaaatta ttgataaact tgcttatata ttaatgttag
     2101 cagacgaatg cacatacttg tcctaaatac tgcatattta ataatttagg aaacacatca
     2161 cttaaaaatt acaacattta aaaaaattac aacacctaga acaagttttg aaattggatg
     2221 cattatgttc aggaatcaag ggctagaggg ttgtgggtga aatggagaat ttaccacctt
     2281 gaaaatgttt cagggggctg gctcagtggt taagagagcc tgttcttccg aaggtccaga
     2341 gttcaaatcc cagcaaccac atggtggctc acaaccatcc gtaacaaaat ctgatgccct
     2401 cttctggagt gtctgaagac aactacagag tacttacata tagtaaataa ataaatctaa
     2461 aaaaaaaaaa aaaaagaaaa agaaaatatt tcagtatact gtttattttt attgagaaca
     2521 acgctccttg agtctaaaca acttcctact tccatatttc aaatttattt tggcaagtac
     2581 attttaagtt gtactttgac tctcaggaga gcctgatggt ataacttggg tctcgagggt
     2641 ggaaagaaag actggcatta tgtagagcat ccagcactag acactcagac agtgtgagct
     2701 gggaagatcc aaatactctg cttgttctgt cctgaatggt cacctggtgg tcctcagaac
     2761 aaagagcgga ggaatgcctt cagggttcac tcctgtaggt gctggggaga gtgtggacac
     2821 cacactgcgg cttccatatg ggagtgacag gagggttctg cctactggag tgcagctgtg
     2881 ggctggcagg agcctccggg atgtcaattt gcattggtaa aggtatcact ctctgggggg
     2941 tgggggggtg ggggggggag ctctgtgttc ctgaatcatg cttacatcac tggaggaact
     3001 atataaagct tctattttta tacggtgtct taggctaaaa caagcaggaa gtggctgttc
     3061 tgaagagaag agggagatac acatgtattg ctggtttgtg tatgagtggt ctcctttcgg
     3121 aggtagtcca gtgcagccca ctacagccct cgcagtggtt aaacagcctg tgtctgtgtt
     3181 gttagatgcc acagcgtcca gggatggagt acgtgatgtc tgccaaatct caaaaactac
     3241 attttaaatg caatttactt aaatagtcac ttgtggctac catactgcac agcaaggcct
     3301 aacctgttac gctggggcag gaggacattg tctgtgatta taaacaaaca aatgaacgaa
     3361 caaatgaatg aatgaattaa taaatgggta atttttcctt ttttttttaa cccaaagaac
     3421 tgatttgccc tcagaatcat ataatttaaa aaggttacca cataacacac aattaaaaca
     3481 aacaaacaaa caaacaaaca caacctaaaa caaaagggtt actaaggctg ggagatggct
     3541 cagtggttaa agctgttgct atccaaatct aagaaccagg tggctcacct gccattccag
     3601 tctgggtacc cagtgcaaac tggctagcta gccaggccta ccggaagctg ttgtcttgaa
     3661 taggagatag agcctcggtc aataaagtgg gaagatgcta gagtaggagt caaactctgg
     3721 cctctccatg gggacacaca caggtgcacc ccacacacat gcaaaaccac gcaacacatc
     3781 cgcgcactca cagaaaa
//
