LOCUS       XM_030253284            9832 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus low density lipoprotein receptor-related
            protein 8, apolipoprotein e receptor (Lrp8), transcript variant
            X36, mRNA.
ACCESSION   XM_030253284
VERSION     XM_030253284.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9832
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..9832
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /note="low density lipoprotein receptor-related protein 8,
                     apolipoprotein e receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 7 ESTs, 3515 long SRA reads, 1 Protein, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 21 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
     CDS             3630..5303
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     8 isoform X29"
                     /protein_id="XP_030109144.1"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
                     /translation="MDTLTKNCKAVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLK
                     NVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVH
                     KHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMYWSDWGFQAKIE
                     KAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIFS
                     TDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENLNNPHDIVIFHELK
                     QPKAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRCYRAPQS
                     TSTTTLASAMTRTVPATTRAPGTTIHDPTYQNHSTETPSQTAAAPHSVNVPRAPSTSP
                     STPSPATSNHSQHYGNEGSQMGSTVTAAVIGVIVPIVVIALLCMSGYLIWRNWKRKNT
                     KSMNFDNPVYRKTTEEEEEDELHIGRTAQIGHVYPAAISNYDRPLWAEPCLGETRDLE
                     DPAPALKELFVLPGEPRSQLHQLPKNPLSELPVVKCKRVALSLEDDGLP"
ORIGIN      
        1 ccagggccag tggtcaggca gcctcggagt gatgacctct tcttgggagg gtcggcggga
       61 agggaagaat aatgctacca ttagaaacaa acggctgggc acgtaggaga cattctcttc
      121 tctcaccctc atgaccacct catgaatagc cattaccatc cccatttaat ggatgaggaa
      181 actgaggctc agacaaggga ggaaacatgc ccaaggctga gggggtggaa ctgagattca
      241 aattcaggtc tacacacagc tttctaccat gtctgacatc tgctcatcca ttctacaatt
      301 ctaccgtttc cactgatctc cgaacaagaa cagggggacc aaaaactggg ctgtacgaaa
      361 tgtggtgtct cgtgccagca cactagcagc actggggata gggcatgtgc ggacagactc
      421 tcagggtgtg aaggacaact gtttctgaga tctcagactg gggcgcatgt cgcatgcaga
      481 gaagcagcct cagcagggac agatggaagt ggccattggg acggttccac atggctgaac
      541 ttcaaacgca ggattatctc cttctcagag agcagtccag caaggtttgg gctgggggtc
      601 tggggaggac catggggagg accatgcatg gcctgattca gtttacttct ctggtaccca
      661 cagtgtgcca ggtctggagt aaggttctga aagggacaag acggtgatcc cacatagtct
      721 tcccctgggg accacagact gacaggctgt gctactagcc tgggctgaga tatatgtggt
      781 cattccggag gaggcgtgcc aggcacttgc ccaccactgc ctctccaggc atctgcccac
      841 tccccgctct ctccctagcc acctctcctg ttccaggagc caggccatct cctcttaagg
      901 cttctgagat tccaagtgtg gagagttgat gggtctgaag caggaagtgt gtggatgggg
      961 gtgagggtcc tggctagaat ctacacttta aaacttcagc tgtggagaga tggctcagta
     1021 gttaagagca ccgactgctc ttccaagggt cgtgagttca aatcccagca accacatgat
     1081 ggctcacaac catccaataa tgagagacag ctatagtgta ctttacatat agtaaataca
     1141 tgtttaaaaa aaaaaagaaa aaaaaaactt cagctgtgat agttctatga gaactcatcc
     1201 acccatgaca gtccccaccc ccccaaaaca ggcccaacct tatagtcaca tgatccttcc
     1261 attataaagc tagcagccac cattgcaggc gagtagggaa tttggggaca gggacatttc
     1321 ctgttaatta aagaaaccaa agctgagagg ccctattggg ctcgctgtgg cctgggcagg
     1381 gaaggaaact gtccttctct ggctctctga gagttctcca gttctgattg tagatgcagg
     1441 gagtggggcc ctggccttgg tggtgagatc tgccagtcgc ttcagaacct cactgggagt
     1501 ccattgttat gaaacacttc ctatcaggac tctcagaagg tggaatcttc tctccctggg
     1561 cttgtatgaa ctgtctagac aggcaggcgg gtgtcagcag cagcatcttg ggggtgcttt
     1621 cccctctggt gccaccacat cccaaaagcc caagacaggg aaaatgcagc cgtcaggggc
     1681 ttggtagagc tgtcagaaga acatgacacg atctgctgac actgtaacac cgaagacatc
     1741 actttatttt atgttcagta acagtgaaaa ttgacatctt gtcgccagaa aatagaaagg
     1801 tgggttccgg gcgcccccgt gtggagagtt gcggagctgc tactgctgtg tagttggcga
     1861 ttaatagcca cagcatccct gacctccttg agccctccca cgggagttct aaagaggggg
     1921 aggaggcaac accccaaacc aaccaaacaa aaaacaagaa agctgagaga atgggtcaga
     1981 gtagacagaa atgctctgga acccaagttc tggttctctt gtcacgtgtg accctgagca
     2041 aggtgctccc ctctgagcct caggcttcct gtctttaaac tagcaggggg gctggctggt
     2101 cgctaaggcc tttgctgtag actttgcact agcctatcag agaggaagcc caggctgcag
     2161 acagggccag gacctgttct ttacttcgtc cacaccctgc aaggggcctc cgtgcccacc
     2221 cggtacccag acatgtgggt gatgtgggtg gatgtgagag gcacacagga ggcagactgg
     2281 gccagaggga gattttctaa actgaagcat gcgatggatg gaggtggagt ttgagcccat
     2341 gcagtggaaa cgttctgatg tagaactagg agcaatggta ggctgcagtg ggttcccaga
     2401 agatgaagca acttgaacaa aaccctggag tggaactatg tggtcatagc cggggtatgt
     2461 gcaggagtga ggtgtgggga ccagggtagt agatgccagg ctggagaatt aaatagtctt
     2521 tgcaagtgat atacacaacc atgccacaaa cggacaaact cctgccttgt catctggtgt
     2581 cagtcatgtt acagatgatt tcctatcctt caagacaata gggctctgca accttagagc
     2641 ccctctctgc cccaccatgt ttgccagctg cagggcagaa tatctgtgta cttggtgaag
     2701 cccagagact cagaaagggc aaatgtggtc ggtccaagtt cagctcccct ttcaagtctc
     2761 cagcaggacc tattccagcc tgtaggtgag tgtgcgcccc gcacgagttc cagtgcagca
     2821 accgctcctg cctggcctct gtgttcgtgt gcgatggtga cgatgactgc ggcgacggca
     2881 gcgacgagcg tggctgctcg gacccggcct gcccgccccg cgagttccgc tgtggaggag
     2941 gcggcacctg catccctgag cgctgggtct gcgaccgcca gttcgactgc gaggaccgct
     3001 cggatgaggc ggccgagctc tgcgggcgag cgggccaggg gaccacggcc acgccagcag
     3061 cctgcgcccc gaccgcccag ttcacctgcc gcagcggcga gtgcatacac ctgggctggc
     3121 gctgcgacgg cgaccgcgac tgcaaggaca agtctgacga ggccgactgc tcaccaggac
     3181 cctgccgcga gaatgagttc cagtgtgggg atgggacttg cgttcttgcc atcaaacggt
     3241 gcaaccagga gcgggactgc ccggacggga gtgacgaagc gggctgcctt caggagtcaa
     3301 cttgtgaggg tccccgcaga tttcagtgta agagtggcga gtgcgtggac ggcgggaaag
     3361 tgtgtgatga tcagagggac tgccgggact ggtcggatga gcctcagaaa gtgtgtgggc
     3421 taaatgagtg tctgcacaat aacggcggct gttcccacat ctgcactgac ctcaagatcg
     3481 gctttgagtg cacgtgccca gcaggcttcc agctcttgga ccagaagacc tgtggtgaca
     3541 ttgatgaatg ccaggacccg gatgcctgca gccaaatctg cgtgaattac aagggctact
     3601 ttaagtgtga atgccaccct ggctatgaga tggatacact gaccaagaac tgcaaagctg
     3661 tagccggcaa gagcccatct ctgatcttca cgaaccgaca cgaggtgcgg aggatagacc
     3721 tggtgaagcg ggactactcg cgcctcatcc ccatgctcaa gaatgtcgtg gcgctggacg
     3781 tggaagtagc caccaatcgc atatactggt gcgacctctc ctaccgcaag atctacagcg
     3841 cccacatgga caaggccagc atcccggacg agcaggtggt cctcattgat gagcagctgc
     3901 actccccgga gggcctggcg gtggactggg tccataagca catctactgg acagactcag
     3961 gcaataagac catctcagtg gccacaaccg atggacgccg ccgctgtact ctcttcagcc
     4021 gtgagctcag tgagccccga gccattgccg ttgaccccct gcgagggttc atgtactggt
     4081 ctgactgggg tttccaggca aagattgaga aggctgggct caatggtgca gaccggcaaa
     4141 cactggtttc agacaacatt gaatggccca atggaatcac cctggacttg ctgagccagc
     4201 gtttgtactg ggtggactcc aagctgcacc aactatccag cattgacttc aatggaggca
     4261 acagaaagat gctgatcttc tccactgact tcctgagtca cccttttggg gttgctgtat
     4321 ttgaggacaa ggtattctgg acagacctgg agaatgaggc cattttcagc gcaaatcggc
     4381 tcaatggcct ggaaatcgcc atcctggccg agaacctcaa taacccacat gacattgtaa
     4441 tcttccacga gctgaagcag ccaaaggctg cagatgcctg tgacctgagt gcccagccca
     4501 acggcggctg tgaatacctg tgccttcctg ctcctcaaat ctccagccac tcccccaagt
     4561 acacgtgtgc ctgtcctgac acgatgtggc tgggcccaga catgaagaga tgctaccgag
     4621 cacctcagtc tacctcaact acaaccttag cctctgccat gacaaggaca gtacctgcta
     4681 ccacaagagc tcctgggaca accatccacg accctaccta ccagaaccat agcacagaga
     4741 cgccaagcca gacagctgcc gcccctcact cggttaacgt ccctagggct cccagcacca
     4801 gcccatccac cccgagccct gctaccagca accactccca gcattatggg aatgaaggca
     4861 gccagatggg ctcaacagtc accgctgctg tcattggggt catcgtgccc atagtggtaa
     4921 tagccctgct atgtatgagt gggtacctca tctggaggaa ctggaagcgg aagaacacca
     4981 agagcatgaa tttcgacaac ccagtgtaca ggaaaacgac agaagaggaa gaggaagatg
     5041 agcttcacat agggaggaca gctcagattg gccacgtcta ccccgcagca atcagcaact
     5101 atgatcgccc actgtgggca gagccctgtc ttggggagac cagagacctg gaagacccag
     5161 cccctgccct caaggagctt tttgtcttgc cgggagaacc aaggtcacag cttcaccaac
     5221 tcccgaagaa ccctctttcc gagctgcctg tcgtcaagtg caagcgagtg gcattaagtc
     5281 ttgaagatga tggactgccc tgaggatggg cccacccact tcgtgcctca tggagttcag
     5341 tcctatgcac tactctctct ggatggtgtg tgattggatg agtgccattt ctatatatgg
     5401 gtctgtgtga gtgtgtgtgt gtgtgtgtgt gagtgtgtgt gtgtgtgtgt gtgtgtgtgt
     5461 gtgtgtgtgt gtgtgtgtgt atgtgacttt ttttaaattt atgttgcgga aaggtaacca
     5521 caaagttatg atgaactgca aacatccaaa ggatgtgaaa gtttttatat gtataatgtt
     5581 ttatacactt tttaactggt tgcactaccc gtgaagaatt catgggacag ccactgctga
     5641 gtgactaaca tgatgcacat aaccaaacgg ggccaatggt acaaacttca ctcatcattt
     5701 gaatacagta tttacagagg atgtttgagt tgagagcttt tttaggtttg aggggcttga
     5761 tttttttgta aataaaatta tgctttgtgg ctatccatca acataagtat aaaaagaaag
     5821 aacgcttcaa cccccttccc catttagatt atttattaac atatttcgaa agtaaggtta
     5881 gctctataaa taatttagag aggtgagagt atttattttt ggtatggctg gctcactgca
     5941 cagactctgt gtttatgtgt gtgtgtctgt gtgagagaag aaaaatctgt agagaagagg
     6001 cacgcttatg actattgttc aaatacataa aaacagttat tttaaaacag tccacaagag
     6061 gggtgtctag ttttcagaga cacttcagaa actttgctca gaaaacagat gctacagttt
     6121 gtgcaggcat gcggtaggaa aggtagatca cctctggcta ctcctgaggc cctgctgagc
     6181 cagcaaaatg ctttccagtt cctctttggc tctcacgatg cccacctagg ctttctggcc
     6241 agtgtactga acagtgctac aagccctcag gagctcaaga tagcagagtc cttctttcaa
     6301 agcccagctt agtgaggact tgggtcaact tcagtaagct tcctctgaag caactgaagg
     6361 ccgagccttt agagcaacca ttgtcaacct ttgtgggtcg cctaagagca tcgcaaacca
     6421 gatatttaca ttatgattca taacagtgac aatcacagtt atgaggtaga aaggaaaggg
     6481 attttatggt tgggggttag tccaacaaga gggacagtgt taatgcttct gaagcatcag
     6541 gaaggttgaa agccactgct ctagagccaa gtgagtgcat gtctagggtt cccatgttta
     6601 cagtaaggac cggctcaggc actgaccctc tgagtcacgt gaatgaggac gaagaatttg
     6661 gaataggttt ggttacatct atttctcatc cccttatttt ccaccattta aaaataataa
     6721 acatgtttct taccaccgta tgttcatatg gataagacta agtccaaaaa ggtgactaca
     6781 tccaaattta tatttcgggg aaataccatg agataattat agcatactgg gcatgtgtcc
     6841 acacacggat tggtttcact gctttataaa taaaaggaac aactctgggt atttgtatag
     6901 aattttcttc atatgtaaca tctttccatt tcctgagcct tgggggtggg gtgggagaat
     6961 gccacttgct gtctgtgaag tccactgttg gaaacataat tccatagtcc cagaaggaat
     7021 tcagtcccca ccaacttact ctttcaaagt gtggtcttcc cgcgactctg cagctctgca
     7081 gttcactcca gctgaacgac cagggacaag tacaacacag gagtttggct taagtggcag
     7141 cagactaata tctaaagttg acataactga aatctgacat ttgaggcata tgtctccgcg
     7201 tccccacaca ccggcttgag tggctcacct gcttgatgtc ctttcaactt ccggggagac
     7261 cgtctggaga cctgtcatcc tgtcatcctg ttcctaggag cttgctctat gtcactcatg
     7321 ttttcctaac ctttaaaaaa tggctgtgtt ccaagcctgg ccattatgtc tgacaatgca
     7381 cgtgttgatg gtcttgagat atacagtgac taaatgcagc tgacccctga cccattccaa
     7441 acagtctcaa ggacaggcag ctgagtcccc tgcagctcgc ctgtcactgt tcatccagga
     7501 atggagagga gaaatcaagt ttactaaaga aaaaggttag aagtgaaatc atcaaaattt
     7561 acacaagata ggcagggttt ttccctttaa tctgcctcca aggaaactga agcagtgata
     7621 gtgtatagtt tctgaacaaa cgttcatagc ctagccttca caacaaggct gaaacatacc
     7681 gtctagggtt tccgaaagat gaaagaattc atatcagaaa taccatgttt cctgaatgtg
     7741 ccacagctgc agtctaaaag cagcctacag taaacagatg ggcaaatcca gggacggccg
     7801 gagagcggaa gcactctgag ggaccagacc gacctccttc tatccttgga aactttttga
     7861 gcctcattct gaggtgtaat tcagacttct gttgcctttc gcctctgcct atgtatccac
     7921 agccaataac agctgaaagg aaactcagta ataaaccaaa aggacagaaa attcaacaaa
     7981 cgttacttat taaaacgaag ccaacccctt ccttctctag aagacaactc tgagcagcct
     8041 gaacaaggtc tcagacctgc atcctctcca cagctatctg cccagtggat tgaaggcact
     8101 aacagaaacg actttcctga aacaagaaac tacagctttg tttactcttc agaatgtgtg
     8161 tatgtgtgtg cacagaggga caggatgaga cggcttctga caaggagtaa gaagaatgag
     8221 acaggattta aactgatgtc agtgaacact gttgaagccc tccagttatc ctcatgtctt
     8281 agtaacatac tcagagtatt cactcgctgc tgtgtgccag gctttgcaga cattgcaggt
     8341 caattcaaca gttttcaccc tttccaaact cacagcagta catatggata caaaaagaaa
     8401 aaaaaatttt cccatagatt tcacctagac tactcccaag gcacaacaaa agagatgggc
     8461 cattttacct gaagaggtgg aaataggtct acataggaat gacccaaagc aatgtcttaa
     8521 aacttaaaaa gtggtgttca ggctgcttct atgagaagag gctgggctca gactgggagt
     8581 gaatcagcag caggaatttc aaggaaaaca tggagttcct tacacctgga ataaagaact
     8641 ttagcagggt tggcaagatg tgaaactgga tggaaagaca agttcaacac aagcacttta
     8701 taaaatagtc tgatgtaagt aagcagacat ttgtttggtc gtcggttcct gtgtgcaagg
     8761 catcatggga aactccctgc cagcacttgg caggcattat tccacctcaa gctttccaga
     8821 gaccacaggg aaatgactgt tttctttatt tgagccagag gttttgatat ggttcctgaa
     8881 ggctaacaga agggcggtgg gcttgtcaac agaagcacgc catgttgccg agcacctgtg
     8941 aggtcctcac gtgggaggaa gagaacaagg tggttaagat agagaatctg gagagggtac
     9001 cccaatcaca ctacagtcgg gtgctactgg gtggaggaga aaaccatcct aaccccacag
     9061 cactgcaaag acgctcctgt cccgccacac tcccaccatc acgaacatca gtaagtcagc
     9121 agtttcagat tctgccattt ccttccccat aaaagcatga agatagggag tcggtgtcct
     9181 tacgctttat ttttagggta tttgggagtt tccaggatgt gaagaagtta ggtggaggaa
     9241 attacggctt caattttttt cagttaacta caggacgctt cattcaggcc gggcaccatg
     9301 tgcacagtct taagaagcag caggaactgc atttgcaaac acgtgttgta aaaaattaat
     9361 tttaaaaaag ctacctgtat aaatataaat atatatattt aaagacaagg ttttgatact
     9421 ttttttttaa aaaacaaaaa ctacaagaga agactgtaca aaccacgggc ttttaaaata
     9481 gcattttgct ctctacaagc tgttaatgtc aggggtgagg ggtgagggac tggtttgcaa
     9541 acacactatc caaatggatt tgcttgtttt gtcaagccac cctccaaatt accatatttg
     9601 gtgtaatagt agggcatgta aagttattgg gtcccattaa ccatttctgc tcttgtcatg
     9661 tcattccggg ttccgttagc tcccgtactc ggcaatccag cttcttccag aggcagaggg
     9721 gctgaaggaa gtgtgctcca tttcactagc tgtactgaca tcatccacat gtggacattt
     9781 gtaatatcag tacactattt ctagagagat taaattcatt ttttaaaatc tg
//
