LOCUS       XM_030253281            7087 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus low density lipoprotein receptor-related
            protein 8, apolipoprotein e receptor (Lrp8), transcript variant
            X33, mRNA.
ACCESSION   XM_030253281
VERSION     XM_030253281.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030253281.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7087
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..7087
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /note="low density lipoprotein receptor-related protein 8,
                     apolipoprotein e receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 6 ESTs, 3485 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
     CDS             885..2558
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     8 isoform X29"
                     /protein_id="XP_030109141.1"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
                     /translation="MDTLTKNCKAVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLK
                     NVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVH
                     KHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMYWSDWGFQAKIE
                     KAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIFS
                     TDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENLNNPHDIVIFHELK
                     QPKAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRCYRAPQS
                     TSTTTLASAMTRTVPATTRAPGTTIHDPTYQNHSTETPSQTAAAPHSVNVPRAPSTSP
                     STPSPATSNHSQHYGNEGSQMGSTVTAAVIGVIVPIVVIALLCMSGYLIWRNWKRKNT
                     KSMNFDNPVYRKTTEEEEEDELHIGRTAQIGHVYPAAISNYDRPLWAEPCLGETRDLE
                     DPAPALKELFVLPGEPRSQLHQLPKNPLSELPVVKCKRVALSLEDDGLP"
ORIGIN      
        1 tgaaggtgcc gtagagggaa ggacaagggg aggcctagca gcctctgcac ccagccctcc
       61 ctgagtgaac ctggggatcc ctctacccta agcacttgcc aagcagatca gtggctgcac
      121 gtgggcttgc ctctcctctc ccacccccgc tttggcatcg ctgtctccaa gccaagagga
      181 cctgcgcgga cagcgacttc acctgtgaca atggccactg catcccagag cggtggaagt
      241 gcgacggcga ggaggagtgt cccgatggct ctgacgaatc gaaggccacg tgctccagtg
      301 aagagtgtcc tgccgagaag ttaagctgcg gacccaccag ccacaagtgt gtgcctgcct
      361 catggcgctg cgacggagag aaggactgtg agggtggtgc tgacgaggcc ggctgtccca
      421 cctcagcacc aggaccctgc cgcgagaatg agttccagtg tggggatggg acttgcgttc
      481 ttgccatcaa acggtgcaac caggagcggg actgcccgga cgggagtgac gaagcgggct
      541 gccttcagga gtcaacttgt gagggtcccc gcagatttca gtgtaagagt ggcgagtgcg
      601 tggacggcgg gaaagtgtgt gatgatcaga gggactgccg ggactggtcg gatgagcctc
      661 agaaagtgtg tgggctaaat gagtgtctgc acaataacgg cggctgttcc cacatctgca
      721 ctgacctcaa gatcggcttt gagtgcacgt gcccagcagg cttccagctc ttggaccaga
      781 agacctgtgg tgacattgat gaatgccagg acccggatgc ctgcagccaa atctgcgtga
      841 attacaaggg ctactttaag tgtgaatgcc accctggcta tgagatggat acactgacca
      901 agaactgcaa agctgtagcc ggcaagagcc catctctgat cttcacgaac cgacacgagg
      961 tgcggaggat agacctggtg aagcgggact actcgcgcct catccccatg ctcaagaatg
     1021 tcgtggcgct ggacgtggaa gtagccacca atcgcatata ctggtgcgac ctctcctacc
     1081 gcaagatcta cagcgcccac atggacaagg ccagcatccc ggacgagcag gtggtcctca
     1141 ttgatgagca gctgcactcc ccggagggcc tggcggtgga ctgggtccat aagcacatct
     1201 actggacaga ctcaggcaat aagaccatct cagtggccac aaccgatgga cgccgccgct
     1261 gtactctctt cagccgtgag ctcagtgagc cccgagccat tgccgttgac cccctgcgag
     1321 ggttcatgta ctggtctgac tggggtttcc aggcaaagat tgagaaggct gggctcaatg
     1381 gtgcagaccg gcaaacactg gtttcagaca acattgaatg gcccaatgga atcaccctgg
     1441 acttgctgag ccagcgtttg tactgggtgg actccaagct gcaccaacta tccagcattg
     1501 acttcaatgg aggcaacaga aagatgctga tcttctccac tgacttcctg agtcaccctt
     1561 ttggggttgc tgtatttgag gacaaggtat tctggacaga cctggagaat gaggccattt
     1621 tcagcgcaaa tcggctcaat ggcctggaaa tcgccatcct ggccgagaac ctcaataacc
     1681 cacatgacat tgtaatcttc cacgagctga agcagccaaa ggctgcagat gcctgtgacc
     1741 tgagtgccca gcccaacggc ggctgtgaat acctgtgcct tcctgctcct caaatctcca
     1801 gccactcccc caagtacacg tgtgcctgtc ctgacacgat gtggctgggc ccagacatga
     1861 agagatgcta ccgagcacct cagtctacct caactacaac cttagcctct gccatgacaa
     1921 ggacagtacc tgctaccaca agagctcctg ggacaaccat ccacgaccct acctaccaga
     1981 accatagcac agagacgcca agccagacag ctgccgcccc tcactcggtt aacgtcccta
     2041 gggctcccag caccagccca tccaccccga gccctgctac cagcaaccac tcccagcatt
     2101 atgggaatga aggcagccag atgggctcaa cagtcaccgc tgctgtcatt ggggtcatcg
     2161 tgcccatagt ggtaatagcc ctgctatgta tgagtgggta cctcatctgg aggaactgga
     2221 agcggaagaa caccaagagc atgaatttcg acaacccagt gtacaggaaa acgacagaag
     2281 aggaagagga agatgagctt cacataggga ggacagctca gattggccac gtctaccccg
     2341 cagcaatcag caactatgat cgcccactgt gggcagagcc ctgtcttggg gagaccagag
     2401 acctggaaga cccagcccct gccctcaagg agctttttgt cttgccggga gaaccaaggt
     2461 cacagcttca ccaactcccg aagaaccctc tttccgagct gcctgtcgtc aagtgcaagc
     2521 gagtggcatt aagtcttgaa gatgatggac tgccctgagg atgggcccac ccacttcgtg
     2581 cctcatggag ttcagtccta tgcactactc tctctggatg gtgtgtgatt ggatgagtgc
     2641 catttctata tatgggtctg tgtgagtgtg tgtgtgtgtg tgtgtgagtg tgtgtgtgtg
     2701 tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtatgtg acttttttta aatttatgtt
     2761 gcggaaaggt aaccacaaag ttatgatgaa ctgcaaacat ccaaaggatg tgaaagtttt
     2821 tatatgtata atgttttata cactttttaa ctggttgcac tacccgtgaa gaattcatgg
     2881 gacagccact gctgagtgac taacatgatg cacataacca aacggggcca atggtacaaa
     2941 cttcactcat catttgaata cagtatttac agaggatgtt tgagttgaga gcttttttag
     3001 gtttgagggg cttgattttt ttgtaaataa aattatgctt tgtggctatc catcaacata
     3061 agtataaaaa gaaagaacgc ttcaaccccc ttccccattt agattattta ttaacatatt
     3121 tcgaaagtaa ggttagctct ataaataatt tagagaggtg agagtattta tttttggtat
     3181 ggctggctca ctgcacagac tctgtgttta tgtgtgtgtg tctgtgtgag agaagaaaaa
     3241 tctgtagaga agaggcacgc ttatgactat tgttcaaata cataaaaaca gttattttaa
     3301 aacagtccac aagaggggtg tctagttttc agagacactt cagaaacttt gctcagaaaa
     3361 cagatgctac agtttgtgca ggcatgcggt aggaaaggta gatcacctct ggctactcct
     3421 gaggccctgc tgagccagca aaatgctttc cagttcctct ttggctctca cgatgcccac
     3481 ctaggctttc tggccagtgt actgaacagt gctacaagcc ctcaggagct caagatagca
     3541 gagtccttct ttcaaagccc agcttagtga ggacttgggt caacttcagt aagcttcctc
     3601 tgaagcaact gaaggccgag cctttagagc aaccattgtc aacctttgtg ggtcgcctaa
     3661 gagcatcgca aaccagatat ttacattatg attcataaca gtgacaatca cagttatgag
     3721 gtagaaagga aagggatttt atggttgggg gttagtccaa caagagggac agtgttaatg
     3781 cttctgaagc atcaggaagg ttgaaagcca ctgctctaga gccaagtgag tgcatgtcta
     3841 gggttcccat gtttacagta aggaccggct caggcactga ccctctgagt cacgtgaatg
     3901 aggacgaaga atttggaata ggtttggtta catctatttc tcatcccctt attttccacc
     3961 atttaaaaat aataaacatg tttcttacca ccgtatgttc atatggataa gactaagtcc
     4021 aaaaaggtga ctacatccaa atttatattt cggggaaata ccatgagata attatagcat
     4081 actgggcatg tgtccacaca cggattggtt tcactgcttt ataaataaaa ggaacaactc
     4141 tgggtatttg tatagaattt tcttcatatg taacatcttt ccatttcctg agccttgggg
     4201 gtggggtggg agaatgccac ttgctgtctg tgaagtccac tgttggaaac ataattccat
     4261 agtcccagaa ggaattcagt ccccaccaac ttactctttc aaagtgtggt cttcccgcga
     4321 ctctgcagct ctgcagttca ctccagctga acgaccaggg acaagtacaa cacaggagtt
     4381 tggcttaagt ggcagcagac taatatctaa agttgacata actgaaatct gacatttgag
     4441 gcatatgtct ccgcgtcccc acacaccggc ttgagtggct cacctgcttg atgtcctttc
     4501 aacttccggg gagaccgtct ggagacctgt catcctgtca tcctgttcct aggagcttgc
     4561 tctatgtcac tcatgttttc ctaaccttta aaaaatggct gtgttccaag cctggccatt
     4621 atgtctgaca atgcacgtgt tgatggtctt gagatataca gtgactaaat gcagctgacc
     4681 cctgacccat tccaaacagt ctcaaggaca ggcagctgag tcccctgcag ctcgcctgtc
     4741 actgttcatc caggaatgga gaggagaaat caagtttact aaagaaaaag gttagaagtg
     4801 aaatcatcaa aatttacaca agataggcag ggtttttccc tttaatctgc ctccaaggaa
     4861 actgaagcag tgatagtgta tagtttctga acaaacgttc atagcctagc cttcacaaca
     4921 aggctgaaac ataccgtcta gggtttccga aagatgaaag aattcatatc agaaatacca
     4981 tgtttcctga atgtgccaca gctgcagtct aaaagcagcc tacagtaaac agatgggcaa
     5041 atccagggac ggccggagag cggaagcact ctgagggacc agaccgacct ccttctatcc
     5101 ttggaaactt tttgagcctc attctgaggt gtaattcaga cttctgttgc ctttcgcctc
     5161 tgcctatgta tccacagcca ataacagctg aaaggaaact cagtaataaa ccaaaaggac
     5221 agaaaattca acaaacgtta cttattaaaa cgaagccaac cccttccttc tctagaagac
     5281 aactctgagc agcctgaaca aggtctcaga cctgcatcct ctccacagct atctgcccag
     5341 tggattgaag gcactaacag aaacgacttt cctgaaacaa gaaactacag ctttgtttac
     5401 tcttcagaat gtgtgtatgt gtgtgcacag agggacagga tgagacggct tctgacaagg
     5461 agtaagaaga atgagacagg atttaaactg atgtcagtga acactgttga agccctccag
     5521 ttatcctcat gtcttagtaa catactcaga gtattcactc gctgctgtgt gccaggcttt
     5581 gcagacattg caggtcaatt caacagtttt caccctttcc aaactcacag cagtacatat
     5641 ggatacaaaa agaaaaaaaa attttcccat agatttcacc tagactactc ccaaggcaca
     5701 acaaaagaga tgggccattt tacctgaaga ggtggaaata ggtctacata ggaatgaccc
     5761 aaagcaatgt cttaaaactt aaaaagtggt gttcaggctg cttctatgag aagaggctgg
     5821 gctcagactg ggagtgaatc agcagcagga atttcaagga aaacatggag ttccttacac
     5881 ctggaataaa gaactttagc agggttggca agatgtgaaa ctggatggaa agacaagttc
     5941 aacacaagca ctttataaaa tagtctgatg taagtaagca gacatttgtt tggtcgtcgg
     6001 ttcctgtgtg caaggcatca tgggaaactc cctgccagca cttggcaggc attattccac
     6061 ctcaagcttt ccagagacca cagggaaatg actgttttct ttatttgagc cagaggtttt
     6121 gatatggttc ctgaaggcta acagaagggc ggtgggcttg tcaacagaag cacgccatgt
     6181 tgccgagcac ctgtgaggtc ctcacgtggg aggaagagaa caaggtggtt aagatagaga
     6241 atctggagag ggtaccccaa tcacactaca gtcgggtgct actgggtgga ggagaaaacc
     6301 atcctaaccc cacagcactg caaagacgct cctgtcccgc cacactccca ccatcacgaa
     6361 catcagtaag tcagcagttt cagattctgc catttccttc cccataaaag catgaagata
     6421 gggagtcggt gtccttacgc tttattttta gggtatttgg gagtttccag gatgtgaaga
     6481 agttaggtgg aggaaattac ggcttcaatt tttttcagtt aactacagga cgcttcattc
     6541 aggccgggca ccatgtgcac agtcttaaga agcagcagga actgcatttg caaacacgtg
     6601 ttgtaaaaaa ttaattttaa aaaagctacc tgtataaata taaatatata tatttaaaga
     6661 caaggttttg atactttttt tttaaaaaac aaaaactaca agagaagact gtacaaacca
     6721 cgggctttta aaatagcatt ttgctctcta caagctgtta atgtcagggg tgaggggtga
     6781 gggactggtt tgcaaacaca ctatccaaat ggatttgctt gttttgtcaa gccaccctcc
     6841 aaattaccat atttggtgta atagtagggc atgtaaagtt attgggtccc attaaccatt
     6901 tctgctcttg tcatgtcatt ccgggttccg ttagctcccg tactcggcaa tccagcttct
     6961 tccagaggca gaggggctga aggaagtgtg ctccatttca ctagctgtac tgacatcatc
     7021 cacatgtgga catttgtaat atcagtacac tatttctaga gagattaaat tcatttttta
     7081 aaatctg
//
