LOCUS       XM_030253279            7465 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus low density lipoprotein receptor-related
            protein 8, apolipoprotein e receptor (Lrp8), transcript variant
            X30, mRNA.
ACCESSION   XM_030253279
VERSION     XM_030253279.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030253279.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7465
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..7465
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /note="low density lipoprotein receptor-related protein 8,
                     apolipoprotein e receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 8 ESTs, 3491 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
     CDS             1263..2936
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     8 isoform X29"
                     /protein_id="XP_030109139.1"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
                     /translation="MDTLTKNCKAVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLK
                     NVVALDVEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVH
                     KHIYWTDSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMYWSDWGFQAKIE
                     KAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIFS
                     TDFLSHPFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENLNNPHDIVIFHELK
                     QPKAADACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRCYRAPQS
                     TSTTTLASAMTRTVPATTRAPGTTIHDPTYQNHSTETPSQTAAAPHSVNVPRAPSTSP
                     STPSPATSNHSQHYGNEGSQMGSTVTAAVIGVIVPIVVIALLCMSGYLIWRNWKRKNT
                     KSMNFDNPVYRKTTEEEEEDELHIGRTAQIGHVYPAAISNYDRPLWAEPCLGETRDLE
                     DPAPALKELFVLPGEPRSQLHQLPKNPLSELPVVKCKRVALSLEDDGLP"
ORIGIN      
        1 tgaaggtgcc gtagagggaa ggacaagggg aggcctagca gcctctgcac ccagccctcc
       61 ctgagtgaac ctggggatcc ctctacccta agcacttgcc aagcagatca gtggctgcac
      121 gtgggcttgc ctctcctctc ccacccccgc tttggcatcg ctgtctccaa gccaagagga
      181 cctgcgcgga cagcgacttc acctgtgaca atggccactg catcccagag cggtggaagt
      241 gcgacggcga ggaggagtgt cccgatggct ctgacgaatc gaaggccacg tgctccagtg
      301 aagagtgtcc tgccgagaag ttaagctgcg gacccaccag ccacaagtgt gtgcctgcct
      361 catggcgctg cgacggagag aaggactgtg agggtggtgc tgacgaggcc ggctgtccca
      421 ccttgtgcgc cccgcacgag ttccagtgca gcaaccgctc ctgcctggcc tctgtgttcg
      481 tgtgcgatgg tgacgatgac tgcggcgacg gcagcgacga gcgtggctgc tcggacccgg
      541 cctgcccgcc ccgcgagttc cgctgtggag gaggcggcac ctgcatccct gagcgctggg
      601 tctgcgaccg ccagttcgac tgcgaggacc gctcggatga ggcggccgag ctctgcgggc
      661 gagcgggcca ggggaccacg gccacgccag cagcctgcgc cccgaccgcc cagttcacct
      721 gccgcagcgg cgagtgcata cacctgggct ggcgctgcga cggcgaccgc gactgcaagg
      781 acaagtctga cgaggccgac tgctcaccag gaccctgccg cgagaatgag ttccagtgtg
      841 gggatgggac ttgcgttctt gccatcaaac ggtgcaacca ggagcgggac tgcccggacg
      901 ggagtgacga agcgggctgc cttcaggagt caacttgtga gggtccccgc agatttcagt
      961 gtaagagtgg cgagtgcgtg gacggcggga aagtgtgtga tgatcagagg gactgccggg
     1021 actggtcgga tgagcctcag aaagtgtgtg ggctaaatga gtgtctgcac aataacggcg
     1081 gctgttccca catctgcact gacctcaaga tcggctttga gtgcacgtgc ccagcaggct
     1141 tccagctctt ggaccagaag acctgtggtg acattgatga atgccaggac ccggatgcct
     1201 gcagccaaat ctgcgtgaat tacaagggct actttaagtg tgaatgccac cctggctatg
     1261 agatggatac actgaccaag aactgcaaag ctgtagccgg caagagccca tctctgatct
     1321 tcacgaaccg acacgaggtg cggaggatag acctggtgaa gcgggactac tcgcgcctca
     1381 tccccatgct caagaatgtc gtggcgctgg acgtggaagt agccaccaat cgcatatact
     1441 ggtgcgacct ctcctaccgc aagatctaca gcgcccacat ggacaaggcc agcatcccgg
     1501 acgagcaggt ggtcctcatt gatgagcagc tgcactcccc ggagggcctg gcggtggact
     1561 gggtccataa gcacatctac tggacagact caggcaataa gaccatctca gtggccacaa
     1621 ccgatggacg ccgccgctgt actctcttca gccgtgagct cagtgagccc cgagccattg
     1681 ccgttgaccc cctgcgaggg ttcatgtact ggtctgactg gggtttccag gcaaagattg
     1741 agaaggctgg gctcaatggt gcagaccggc aaacactggt ttcagacaac attgaatggc
     1801 ccaatggaat caccctggac ttgctgagcc agcgtttgta ctgggtggac tccaagctgc
     1861 accaactatc cagcattgac ttcaatggag gcaacagaaa gatgctgatc ttctccactg
     1921 acttcctgag tcaccctttt ggggttgctg tatttgagga caaggtattc tggacagacc
     1981 tggagaatga ggccattttc agcgcaaatc ggctcaatgg cctggaaatc gccatcctgg
     2041 ccgagaacct caataaccca catgacattg taatcttcca cgagctgaag cagccaaagg
     2101 ctgcagatgc ctgtgacctg agtgcccagc ccaacggcgg ctgtgaatac ctgtgccttc
     2161 ctgctcctca aatctccagc cactccccca agtacacgtg tgcctgtcct gacacgatgt
     2221 ggctgggccc agacatgaag agatgctacc gagcacctca gtctacctca actacaacct
     2281 tagcctctgc catgacaagg acagtacctg ctaccacaag agctcctggg acaaccatcc
     2341 acgaccctac ctaccagaac catagcacag agacgccaag ccagacagct gccgcccctc
     2401 actcggttaa cgtccctagg gctcccagca ccagcccatc caccccgagc cctgctacca
     2461 gcaaccactc ccagcattat gggaatgaag gcagccagat gggctcaaca gtcaccgctg
     2521 ctgtcattgg ggtcatcgtg cccatagtgg taatagccct gctatgtatg agtgggtacc
     2581 tcatctggag gaactggaag cggaagaaca ccaagagcat gaatttcgac aacccagtgt
     2641 acaggaaaac gacagaagag gaagaggaag atgagcttca catagggagg acagctcaga
     2701 ttggccacgt ctaccccgca gcaatcagca actatgatcg cccactgtgg gcagagccct
     2761 gtcttgggga gaccagagac ctggaagacc cagcccctgc cctcaaggag ctttttgtct
     2821 tgccgggaga accaaggtca cagcttcacc aactcccgaa gaaccctctt tccgagctgc
     2881 ctgtcgtcaa gtgcaagcga gtggcattaa gtcttgaaga tgatggactg ccctgaggat
     2941 gggcccaccc acttcgtgcc tcatggagtt cagtcctatg cactactctc tctggatggt
     3001 gtgtgattgg atgagtgcca tttctatata tgggtctgtg tgagtgtgtg tgtgtgtgtg
     3061 tgtgagtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtatgtgac
     3121 tttttttaaa tttatgttgc ggaaaggtaa ccacaaagtt atgatgaact gcaaacatcc
     3181 aaaggatgtg aaagttttta tatgtataat gttttataca ctttttaact ggttgcacta
     3241 cccgtgaaga attcatggga cagccactgc tgagtgacta acatgatgca cataaccaaa
     3301 cggggccaat ggtacaaact tcactcatca tttgaataca gtatttacag aggatgtttg
     3361 agttgagagc ttttttaggt ttgaggggct tgattttttt gtaaataaaa ttatgctttg
     3421 tggctatcca tcaacataag tataaaaaga aagaacgctt caaccccctt ccccatttag
     3481 attatttatt aacatatttc gaaagtaagg ttagctctat aaataattta gagaggtgag
     3541 agtatttatt tttggtatgg ctggctcact gcacagactc tgtgtttatg tgtgtgtgtc
     3601 tgtgtgagag aagaaaaatc tgtagagaag aggcacgctt atgactattg ttcaaataca
     3661 taaaaacagt tattttaaaa cagtccacaa gaggggtgtc tagttttcag agacacttca
     3721 gaaactttgc tcagaaaaca gatgctacag tttgtgcagg catgcggtag gaaaggtaga
     3781 tcacctctgg ctactcctga ggccctgctg agccagcaaa atgctttcca gttcctcttt
     3841 ggctctcacg atgcccacct aggctttctg gccagtgtac tgaacagtgc tacaagccct
     3901 caggagctca agatagcaga gtccttcttt caaagcccag cttagtgagg acttgggtca
     3961 acttcagtaa gcttcctctg aagcaactga aggccgagcc tttagagcaa ccattgtcaa
     4021 cctttgtggg tcgcctaaga gcatcgcaaa ccagatattt acattatgat tcataacagt
     4081 gacaatcaca gttatgaggt agaaaggaaa gggattttat ggttgggggt tagtccaaca
     4141 agagggacag tgttaatgct tctgaagcat caggaaggtt gaaagccact gctctagagc
     4201 caagtgagtg catgtctagg gttcccatgt ttacagtaag gaccggctca ggcactgacc
     4261 ctctgagtca cgtgaatgag gacgaagaat ttggaatagg tttggttaca tctatttctc
     4321 atccccttat tttccaccat ttaaaaataa taaacatgtt tcttaccacc gtatgttcat
     4381 atggataaga ctaagtccaa aaaggtgact acatccaaat ttatatttcg gggaaatacc
     4441 atgagataat tatagcatac tgggcatgtg tccacacacg gattggtttc actgctttat
     4501 aaataaaagg aacaactctg ggtatttgta tagaattttc ttcatatgta acatctttcc
     4561 atttcctgag ccttgggggt ggggtgggag aatgccactt gctgtctgtg aagtccactg
     4621 ttggaaacat aattccatag tcccagaagg aattcagtcc ccaccaactt actctttcaa
     4681 agtgtggtct tcccgcgact ctgcagctct gcagttcact ccagctgaac gaccagggac
     4741 aagtacaaca caggagtttg gcttaagtgg cagcagacta atatctaaag ttgacataac
     4801 tgaaatctga catttgaggc atatgtctcc gcgtccccac acaccggctt gagtggctca
     4861 cctgcttgat gtcctttcaa cttccgggga gaccgtctgg agacctgtca tcctgtcatc
     4921 ctgttcctag gagcttgctc tatgtcactc atgttttcct aacctttaaa aaatggctgt
     4981 gttccaagcc tggccattat gtctgacaat gcacgtgttg atggtcttga gatatacagt
     5041 gactaaatgc agctgacccc tgacccattc caaacagtct caaggacagg cagctgagtc
     5101 ccctgcagct cgcctgtcac tgttcatcca ggaatggaga ggagaaatca agtttactaa
     5161 agaaaaaggt tagaagtgaa atcatcaaaa tttacacaag ataggcaggg tttttccctt
     5221 taatctgcct ccaaggaaac tgaagcagtg atagtgtata gtttctgaac aaacgttcat
     5281 agcctagcct tcacaacaag gctgaaacat accgtctagg gtttccgaaa gatgaaagaa
     5341 ttcatatcag aaataccatg tttcctgaat gtgccacagc tgcagtctaa aagcagccta
     5401 cagtaaacag atgggcaaat ccagggacgg ccggagagcg gaagcactct gagggaccag
     5461 accgacctcc ttctatcctt ggaaactttt tgagcctcat tctgaggtgt aattcagact
     5521 tctgttgcct ttcgcctctg cctatgtatc cacagccaat aacagctgaa aggaaactca
     5581 gtaataaacc aaaaggacag aaaattcaac aaacgttact tattaaaacg aagccaaccc
     5641 cttccttctc tagaagacaa ctctgagcag cctgaacaag gtctcagacc tgcatcctct
     5701 ccacagctat ctgcccagtg gattgaaggc actaacagaa acgactttcc tgaaacaaga
     5761 aactacagct ttgtttactc ttcagaatgt gtgtatgtgt gtgcacagag ggacaggatg
     5821 agacggcttc tgacaaggag taagaagaat gagacaggat ttaaactgat gtcagtgaac
     5881 actgttgaag ccctccagtt atcctcatgt cttagtaaca tactcagagt attcactcgc
     5941 tgctgtgtgc caggctttgc agacattgca ggtcaattca acagttttca ccctttccaa
     6001 actcacagca gtacatatgg atacaaaaag aaaaaaaaat tttcccatag atttcaccta
     6061 gactactccc aaggcacaac aaaagagatg ggccatttta cctgaagagg tggaaatagg
     6121 tctacatagg aatgacccaa agcaatgtct taaaacttaa aaagtggtgt tcaggctgct
     6181 tctatgagaa gaggctgggc tcagactggg agtgaatcag cagcaggaat ttcaaggaaa
     6241 acatggagtt ccttacacct ggaataaaga actttagcag ggttggcaag atgtgaaact
     6301 ggatggaaag acaagttcaa cacaagcact ttataaaata gtctgatgta agtaagcaga
     6361 catttgtttg gtcgtcggtt cctgtgtgca aggcatcatg ggaaactccc tgccagcact
     6421 tggcaggcat tattccacct caagctttcc agagaccaca gggaaatgac tgttttcttt
     6481 atttgagcca gaggttttga tatggttcct gaaggctaac agaagggcgg tgggcttgtc
     6541 aacagaagca cgccatgttg ccgagcacct gtgaggtcct cacgtgggag gaagagaaca
     6601 aggtggttaa gatagagaat ctggagaggg taccccaatc acactacagt cgggtgctac
     6661 tgggtggagg agaaaaccat cctaacccca cagcactgca aagacgctcc tgtcccgcca
     6721 cactcccacc atcacgaaca tcagtaagtc agcagtttca gattctgcca tttccttccc
     6781 cataaaagca tgaagatagg gagtcggtgt ccttacgctt tatttttagg gtatttggga
     6841 gtttccagga tgtgaagaag ttaggtggag gaaattacgg cttcaatttt tttcagttaa
     6901 ctacaggacg cttcattcag gccgggcacc atgtgcacag tcttaagaag cagcaggaac
     6961 tgcatttgca aacacgtgtt gtaaaaaatt aattttaaaa aagctacctg tataaatata
     7021 aatatatata tttaaagaca aggttttgat actttttttt taaaaaacaa aaactacaag
     7081 agaagactgt acaaaccacg ggcttttaaa atagcatttt gctctctaca agctgttaat
     7141 gtcaggggtg aggggtgagg gactggtttg caaacacact atccaaatgg atttgcttgt
     7201 tttgtcaagc caccctccaa attaccatat ttggtgtaat agtagggcat gtaaagttat
     7261 tgggtcccat taaccatttc tgctcttgtc atgtcattcc gggttccgtt agctcccgta
     7321 ctcggcaatc cagcttcttc cagaggcaga ggggctgaag gaagtgtgct ccatttcact
     7381 agctgtactg acatcatcca catgtggaca tttgtaatat cagtacacta tttctagaga
     7441 gattaaattc attttttaaa atctg
//
