LOCUS       XM_011240465            7328 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus low density lipoprotein receptor-related
            protein 8, apolipoprotein e receptor (Lrp8), transcript variant
            X19, mRNA.
ACCESSION   XM_011240465
VERSION     XM_011240465.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011240465.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7328
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..7328
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /note="low density lipoprotein receptor-related protein 8,
                     apolipoprotein e receptor; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 4 ESTs, 3556 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 35 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
     CDS             274..2799
                     /gene="Lrp8"
                     /gene_synonym="4932703M08Rik; ApoER2; Lr8b"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     8 isoform X19"
                     /protein_id="XP_011238767.1"
                     /db_xref="GeneID:16975"
                     /db_xref="MGI:MGI:1340044"
                     /translation="MGRPELGALRPLALLLLLLLQLQHLSAADPLPGGQGPVKECEED
                     QFRCRNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKCDGE
                     EECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCPTS
                     PGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQVAPSFPGNRRHPRGLNEC
                     LHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFK
                     CECHPGYEMDTLTKNCKAVAGKSPSLIFTNRHEVRRIDLVKRDYSRLIPMLKNVVALD
                     VEVATNRIYWCDLSYRKIYSAHMDKASIPDEQVVLIDEQLHSPEGLAVDWVHKHIYWT
                     DSGNKTISVATTDGRRRCTLFSRELSEPRAIAVDPLRGFMYWSDWGFQAKIEKAGLNG
                     ADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKMLIFSTDFLSH
                     PFGVAVFEDKVFWTDLENEAIFSANRLNGLEIAILAENLNNPHDIVIFHELKQPKAAD
                     ACDLSAQPNGGCEYLCLPAPQISSHSPKYTCACPDTMWLGPDMKRCYRAPQSTSTTTL
                     ASAMTRTVPATTRAPGTTIHDPTYQNHSTETPSQTAAAPHSVNVPRAPSTSPSTPSPA
                     TSNHSQHYGNEGSQMGSTVTAAVIGVIVPIVVIALLCMSGYLIWRNWKRKNTKSMNFD
                     NPVYRKTTEEEEEDELHIGRTAQIGHVYPAAISNYDRPLWAEPCLGETRDLEDPAPAL
                     KELFVLPGEPRSQLHQLPKNPLSELPVVKCKRVALSLEDDGLP"
ORIGIN      
        1 gaggagcgtg gggcggaggc ggcggcggga gggagcgcgc gcgccggcgg cggctgccca
       61 gggccggggc cgcgcgccca gcctgagccc gccccgccgc cgagcgtcac cgaacctgct
      121 tgaaatgcag ccggggagcc ggggcgggcg gcagcggtgg tggtggcggc ggcggcagcg
      181 gcagccccgg cgccgcggca aggacttggc gggctgaggc gcggcggcgg cgcgggggtc
      241 tcggggcgcg gcggccggag ccccgggccc gctatgggcc gcccagaact gggcgcgctc
      301 cggccgctgg cgctgttgct gttgctgctg ctgcagcttc agcatctctc cgcagcggat
      361 ccgctgccgg gcggccaagg gccagtcaag gagtgtgaag aggaccagtt tcggtgtcgg
      421 aacgagcgct gcattccctt ggtgtggaga tgcgatgagg acaacgactg ctcggacaac
      481 agcgacgagg acgactgccc caagaggacc tgcgcggaca gcgacttcac ctgtgacaat
      541 ggccactgca tcccagagcg gtggaagtgc gacggcgagg aggagtgtcc cgatggctct
      601 gacgaatcga aggccacgtg ctccagtgaa gagtgtcctg ccgagaagtt aagctgcgga
      661 cccaccagcc acaagtgtgt gcctgcctca tggcgctgcg acggagagaa ggactgtgag
      721 ggtggtgctg acgaggccgg ctgtcccacc tcaccaggac cctgccgcga gaatgagttc
      781 cagtgtgggg atgggacttg cgttcttgcc atcaaacggt gcaaccagga gcgggactgc
      841 ccggacggga gtgacgaagc gggctgcctt caggttgcac catcattccc gggaaacagg
      901 aggcatccca gggggctaaa tgagtgtctg cacaataacg gcggctgttc ccacatctgc
      961 actgacctca agatcggctt tgagtgcacg tgcccagcag gcttccagct cttggaccag
     1021 aagacctgtg gtgacattga tgaatgccag gacccggatg cctgcagcca aatctgcgtg
     1081 aattacaagg gctactttaa gtgtgaatgc caccctggct atgagatgga tacactgacc
     1141 aagaactgca aagctgtagc cggcaagagc ccatctctga tcttcacgaa ccgacacgag
     1201 gtgcggagga tagacctggt gaagcgggac tactcgcgcc tcatccccat gctcaagaat
     1261 gtcgtggcgc tggacgtgga agtagccacc aatcgcatat actggtgcga cctctcctac
     1321 cgcaagatct acagcgccca catggacaag gccagcatcc cggacgagca ggtggtcctc
     1381 attgatgagc agctgcactc cccggagggc ctggcggtgg actgggtcca taagcacatc
     1441 tactggacag actcaggcaa taagaccatc tcagtggcca caaccgatgg acgccgccgc
     1501 tgtactctct tcagccgtga gctcagtgag ccccgagcca ttgccgttga ccccctgcga
     1561 gggttcatgt actggtctga ctggggtttc caggcaaaga ttgagaaggc tgggctcaat
     1621 ggtgcagacc ggcaaacact ggtttcagac aacattgaat ggcccaatgg aatcaccctg
     1681 gacttgctga gccagcgttt gtactgggtg gactccaagc tgcaccaact atccagcatt
     1741 gacttcaatg gaggcaacag aaagatgctg atcttctcca ctgacttcct gagtcaccct
     1801 tttggggttg ctgtatttga ggacaaggta ttctggacag acctggagaa tgaggccatt
     1861 ttcagcgcaa atcggctcaa tggcctggaa atcgccatcc tggccgagaa cctcaataac
     1921 ccacatgaca ttgtaatctt ccacgagctg aagcagccaa aggctgcaga tgcctgtgac
     1981 ctgagtgccc agcccaacgg cggctgtgaa tacctgtgcc ttcctgctcc tcaaatctcc
     2041 agccactccc ccaagtacac gtgtgcctgt cctgacacga tgtggctggg cccagacatg
     2101 aagagatgct accgagcacc tcagtctacc tcaactacaa ccttagcctc tgccatgaca
     2161 aggacagtac ctgctaccac aagagctcct gggacaacca tccacgaccc tacctaccag
     2221 aaccatagca cagagacgcc aagccagaca gctgccgccc ctcactcggt taacgtccct
     2281 agggctccca gcaccagccc atccaccccg agccctgcta ccagcaacca ctcccagcat
     2341 tatgggaatg aaggcagcca gatgggctca acagtcaccg ctgctgtcat tggggtcatc
     2401 gtgcccatag tggtaatagc cctgctatgt atgagtgggt acctcatctg gaggaactgg
     2461 aagcggaaga acaccaagag catgaatttc gacaacccag tgtacaggaa aacgacagaa
     2521 gaggaagagg aagatgagct tcacataggg aggacagctc agattggcca cgtctacccc
     2581 gcagcaatca gcaactatga tcgcccactg tgggcagagc cctgtcttgg ggagaccaga
     2641 gacctggaag acccagcccc tgccctcaag gagctttttg tcttgccggg agaaccaagg
     2701 tcacagcttc accaactccc gaagaaccct ctttccgagc tgcctgtcgt caagtgcaag
     2761 cgagtggcat taagtcttga agatgatgga ctgccctgag gatgggccca cccacttcgt
     2821 gcctcatgga gttcagtcct atgcactact ctctctggat ggtgtgtgat tggatgagtg
     2881 ccatttctat atatgggtct gtgtgagtgt gtgtgtgtgt gtgtgtgagt gtgtgtgtgt
     2941 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtatgt gacttttttt aaatttatgt
     3001 tgcggaaagg taaccacaaa gttatgatga actgcaaaca tccaaaggat gtgaaagttt
     3061 ttatatgtat aatgttttat acacttttta actggttgca ctacccgtga agaattcatg
     3121 ggacagccac tgctgagtga ctaacatgat gcacataacc aaacggggcc aatggtacaa
     3181 acttcactca tcatttgaat acagtattta cagaggatgt ttgagttgag agctttttta
     3241 ggtttgaggg gcttgatttt tttgtaaata aaattatgct ttgtggctat ccatcaacat
     3301 aagtataaaa agaaagaacg cttcaacccc cttccccatt tagattattt attaacatat
     3361 ttcgaaagta aggttagctc tataaataat ttagagaggt gagagtattt atttttggta
     3421 tggctggctc actgcacaga ctctgtgttt atgtgtgtgt gtctgtgtga gagaagaaaa
     3481 atctgtagag aagaggcacg cttatgacta ttgttcaaat acataaaaac agttatttta
     3541 aaacagtcca caagaggggt gtctagtttt cagagacact tcagaaactt tgctcagaaa
     3601 acagatgcta cagtttgtgc aggcatgcgg taggaaaggt agatcacctc tggctactcc
     3661 tgaggccctg ctgagccagc aaaatgcttt ccagttcctc tttggctctc acgatgccca
     3721 cctaggcttt ctggccagtg tactgaacag tgctacaagc cctcaggagc tcaagatagc
     3781 agagtccttc tttcaaagcc cagcttagtg aggacttggg tcaacttcag taagcttcct
     3841 ctgaagcaac tgaaggccga gcctttagag caaccattgt caacctttgt gggtcgccta
     3901 agagcatcgc aaaccagata tttacattat gattcataac agtgacaatc acagttatga
     3961 ggtagaaagg aaagggattt tatggttggg ggttagtcca acaagaggga cagtgttaat
     4021 gcttctgaag catcaggaag gttgaaagcc actgctctag agccaagtga gtgcatgtct
     4081 agggttccca tgtttacagt aaggaccggc tcaggcactg accctctgag tcacgtgaat
     4141 gaggacgaag aatttggaat aggtttggtt acatctattt ctcatcccct tattttccac
     4201 catttaaaaa taataaacat gtttcttacc accgtatgtt catatggata agactaagtc
     4261 caaaaaggtg actacatcca aatttatatt tcggggaaat accatgagat aattatagca
     4321 tactgggcat gtgtccacac acggattggt ttcactgctt tataaataaa aggaacaact
     4381 ctgggtattt gtatagaatt ttcttcatat gtaacatctt tccatttcct gagccttggg
     4441 ggtggggtgg gagaatgcca cttgctgtct gtgaagtcca ctgttggaaa cataattcca
     4501 tagtcccaga aggaattcag tccccaccaa cttactcttt caaagtgtgg tcttcccgcg
     4561 actctgcagc tctgcagttc actccagctg aacgaccagg gacaagtaca acacaggagt
     4621 ttggcttaag tggcagcaga ctaatatcta aagttgacat aactgaaatc tgacatttga
     4681 ggcatatgtc tccgcgtccc cacacaccgg cttgagtggc tcacctgctt gatgtccttt
     4741 caacttccgg ggagaccgtc tggagacctg tcatcctgtc atcctgttcc taggagcttg
     4801 ctctatgtca ctcatgtttt cctaaccttt aaaaaatggc tgtgttccaa gcctggccat
     4861 tatgtctgac aatgcacgtg ttgatggtct tgagatatac agtgactaaa tgcagctgac
     4921 ccctgaccca ttccaaacag tctcaaggac aggcagctga gtcccctgca gctcgcctgt
     4981 cactgttcat ccaggaatgg agaggagaaa tcaagtttac taaagaaaaa ggttagaagt
     5041 gaaatcatca aaatttacac aagataggca gggtttttcc ctttaatctg cctccaagga
     5101 aactgaagca gtgatagtgt atagtttctg aacaaacgtt catagcctag ccttcacaac
     5161 aaggctgaaa cataccgtct agggtttccg aaagatgaaa gaattcatat cagaaatacc
     5221 atgtttcctg aatgtgccac agctgcagtc taaaagcagc ctacagtaaa cagatgggca
     5281 aatccaggga cggccggaga gcggaagcac tctgagggac cagaccgacc tccttctatc
     5341 cttggaaact ttttgagcct cattctgagg tgtaattcag acttctgttg cctttcgcct
     5401 ctgcctatgt atccacagcc aataacagct gaaaggaaac tcagtaataa accaaaagga
     5461 cagaaaattc aacaaacgtt acttattaaa acgaagccaa ccccttcctt ctctagaaga
     5521 caactctgag cagcctgaac aaggtctcag acctgcatcc tctccacagc tatctgccca
     5581 gtggattgaa ggcactaaca gaaacgactt tcctgaaaca agaaactaca gctttgttta
     5641 ctcttcagaa tgtgtgtatg tgtgtgcaca gagggacagg atgagacggc ttctgacaag
     5701 gagtaagaag aatgagacag gatttaaact gatgtcagtg aacactgttg aagccctcca
     5761 gttatcctca tgtcttagta acatactcag agtattcact cgctgctgtg tgccaggctt
     5821 tgcagacatt gcaggtcaat tcaacagttt tcaccctttc caaactcaca gcagtacata
     5881 tggatacaaa aagaaaaaaa aattttccca tagatttcac ctagactact cccaaggcac
     5941 aacaaaagag atgggccatt ttacctgaag aggtggaaat aggtctacat aggaatgacc
     6001 caaagcaatg tcttaaaact taaaaagtgg tgttcaggct gcttctatga gaagaggctg
     6061 ggctcagact gggagtgaat cagcagcagg aatttcaagg aaaacatgga gttccttaca
     6121 cctggaataa agaactttag cagggttggc aagatgtgaa actggatgga aagacaagtt
     6181 caacacaagc actttataaa atagtctgat gtaagtaagc agacatttgt ttggtcgtcg
     6241 gttcctgtgt gcaaggcatc atgggaaact ccctgccagc acttggcagg cattattcca
     6301 cctcaagctt tccagagacc acagggaaat gactgttttc tttatttgag ccagaggttt
     6361 tgatatggtt cctgaaggct aacagaaggg cggtgggctt gtcaacagaa gcacgccatg
     6421 ttgccgagca cctgtgaggt cctcacgtgg gaggaagaga acaaggtggt taagatagag
     6481 aatctggaga gggtacccca atcacactac agtcgggtgc tactgggtgg aggagaaaac
     6541 catcctaacc ccacagcact gcaaagacgc tcctgtcccg ccacactccc accatcacga
     6601 acatcagtaa gtcagcagtt tcagattctg ccatttcctt ccccataaaa gcatgaagat
     6661 agggagtcgg tgtccttacg ctttattttt agggtatttg ggagtttcca ggatgtgaag
     6721 aagttaggtg gaggaaatta cggcttcaat ttttttcagt taactacagg acgcttcatt
     6781 caggccgggc accatgtgca cagtcttaag aagcagcagg aactgcattt gcaaacacgt
     6841 gttgtaaaaa attaatttta aaaaagctac ctgtataaat ataaatatat atatttaaag
     6901 acaaggtttt gatacttttt ttttaaaaaa caaaaactac aagagaagac tgtacaaacc
     6961 acgggctttt aaaatagcat tttgctctct acaagctgtt aatgtcaggg gtgaggggtg
     7021 agggactggt ttgcaaacac actatccaaa tggatttgct tgttttgtca agccaccctc
     7081 caaattacca tatttggtgt aatagtaggg catgtaaagt tattgggtcc cattaaccat
     7141 ttctgctctt gtcatgtcat tccgggttcc gttagctccc gtactcggca atccagcttc
     7201 ttccagaggc agaggggctg aaggaagtgt gctccatttc actagctgta ctgacatcat
     7261 ccacatgtgg acatttgtaa tatcagtaca ctatttctag agagattaaa ttcatttttt
     7321 aaaatctg
//
