LOCUS       XM_006520903            4279 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus low density lipoprotein-related protein 12
            (Lrp12), transcript variant X2, mRNA.
ACCESSION   XM_006520903
VERSION     XM_006520903.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006520903.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4279
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..4279
                     /gene="Lrp12"
                     /gene_synonym="C820005L12Rik; LRP-12"
                     /note="low density lipoprotein-related protein 12; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 mRNAs, 14 ESTs, 535 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 46 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:239393"
                     /db_xref="MGI:MGI:2443132"
     CDS             340..2862
                     /gene="Lrp12"
                     /gene_synonym="C820005L12Rik; LRP-12"
                     /codon_start=1
                     /product="low-density lipoprotein receptor-related protein
                     12 isoform X2"
                     /protein_id="XP_006520966.1"
                     /db_xref="GeneID:239393"
                     /db_xref="MGI:MGI:2443132"
                     /translation="MARRWSTKESQRRGSAWLLLFLAGVYACGESPEQIRAPSGIITS
                     PGWPSDYPAQVNCSWLIRANPGEIITISFQDFDIQGSRRCTLDWLTIETYKNIESYRA
                     CGSTIPPPYISSQDHVWIRFHSDDSVSRKGFRLAYFSAGKSEQPDCACDQFRCGNGKC
                     IPEAWKCNSMDECGDSSDEEVCASDAHPPTTTAFQPCAYNQFQCLSRFTKVYTCLPES
                     LKCDGNIDCLDLGDEIDCDMPTCGQWLKYFYGTFNSPNYPDFYPPGSNCTWLIDTGDH
                     RKVILRFTDFKLDGTGYGDYVKIYDGLEENPRKLLRVLTAFDSHAPLTVVSSSGQIRV
                     HFCADKVNAARGFNATYQVDGFCLPWEIPCGGNWGCYTEQQRCDGYWHCPNGRDEINC
                     TMCQKEEFPCSRNGVCYPRSDRCNYQNHCPNGSDEKNCFFCQPGNFHCKNNRCVFESW
                     VCDSQDDCGDGSDEENCPVIVPTRVITAAVIGSLICGLLLVIALGCTCKLYSLRMFER
                     RSFETQLSRVEAELLRREAPPSYGQLIAQGLIPPVEDFPVCSPNQASVLENLRLAVRS
                     QLGFTSIRLPMTGRSSNIWNRIFNFARSRHSGSLALVSGDGDEVVPSQSSSRETERSR
                     PHRSLFSVESDDTDTENERRDTAGASGGVAAPLPQKVPPTTAVEATVGSGGNSSAQST
                     RGGHADGREVSSVEAPSVSPARHQLTSALSRMTQGLRWVRFTLGRSSSTTQNRSPLRQ
                     LDTAVSGREDDDDVEMLIPVSDGASDIDANDCSRPLLDLASDQVQGFRQPHSAGNPGV
                     RTSNRDGPCERCGIVHTAQIPDTCLEATVKTETSDDEALLLC"
ORIGIN      
        1 ttgccgagtg cacggatgag cgccggtgcc ggctcgcgct cagtctggcg ggtggcggcg
       61 ccggctggtt gtgcggcgcg aggccggagc cccgcagttg ccggccctgt cgcctgcggc
      121 tggcgcgcgc gctgcgcgtc cctgcccccg ggaaggccgg cccgctaggg gctcgcgcga
      181 ccgacgcagg gccggcggga gggagcgcgc gcgggcggcc ccgcccctcc ccctccgccg
      241 ccgcggagcg cgcagggagc agccaggggc tcggcggcgg cggcgtctgg ccccagctcc
      301 tcctcctcca tctcctcgct ccctccatct gccgtgggta tggcccgtcg ctggagcaca
      361 aaagagtctc agcggcgggg gtcggcgtgg ctcttgcttt tcctcgctgg ggtgtacgct
      421 tgtggggaga gtccagaaca aattcgagca ccgagtggaa taatcacgag tccaggctgg
      481 ccttcagact atcctgccca agtcaactgc agctggctca taagggcaaa cccaggggag
      541 atcattacta taagttttca ggattttgat atccaggggt ccagaagatg cactttggac
      601 tggctgacaa tagaaacata caagaatatt gaaagttacc gagcgtgtgg gtccacaatt
      661 ccgccaccat atatctcttc ccaagaccac gtttggatcc ggttccactc agatgacagc
      721 gtgtccagga aaggcttcag gctggcgtat ttttcagcag ggaaatctga gcagccagac
      781 tgtgcctgtg atcagttccg ctgtggaaat ggaaagtgta ttccagaagc ctggaagtgc
      841 aacagcatgg acgagtgtgg agacagttct gacgaggagg tctgtgccag cgatgctcac
      901 cccccaacca cgactgcttt ccaaccctgt gcctacaacc agttccagtg tctgtcccgc
      961 ttcaccaaag tttacacgtg tctccctgag tccttaaagt gtgatgggaa cattgactgc
     1021 ctggacctag gagacgagat agactgtgac atgccgacat gcggacaatg gttaaaatac
     1081 ttctatggca ccttcaattc tcccaactac cccgactttt atcctcctgg aagtaactgc
     1141 acctggctga tagacactgg tgatcatcgg aaagtcatct tacggttcac tgactttaaa
     1201 cttgatggta ccgggtatgg tgattatgtc aaaatatatg acggactgga ggagaatcct
     1261 cgcaagctct tgcgggtgct aactgctttc gattctcacg ctcctctgac ggtcgtttct
     1321 tcctccggac agataagagt acatttctgt gctgataaag tgaatgctgc aagagggttc
     1381 aacgctactt accaagtcga tggcttctgt ttgccatggg aaataccctg tgggggcaac
     1441 tgggggtgct acacagagca gcagcgctgt gacgggtact ggcattgccc aaacggaagg
     1501 gatgaaatca attgtaccat gtgccaaaag gaagaatttc catgttctcg aaatggtgtc
     1561 tgctaccctc gttctgatcg ctgcaactac caaaaccatt gtccgaacgg ctctgatgaa
     1621 aaaaactgct tcttttgcca gccagggaat ttccactgta agaacaaccg ctgtgtgttt
     1681 gaaagctggg tgtgtgattc ccaggatgac tgcggtgacg gcagtgacga ggagaactgc
     1741 ccagtcattg tgcctaccag agtcataaca gcagcagtca tcgggagcct catctgtggc
     1801 ctgctgctcg tcattgcatt ggggtgcact tgcaagcttt attctctgag aatgtttgaa
     1861 cggagatcat ttgagaccca gttgtcacgc gtggaagcag aacttctccg aagagaggct
     1921 cctccctcat atggacagtt gatcgctcag ggactaatcc cacccgtaga agattttcct
     1981 gtctgttcac ctaatcaggc ttccgtttta gaaaacctga ggctagctgt ccgatctcag
     2041 ctgggattta cttcaatcag gcttcctatg acaggcagat ctagcaacat ttggaatcgt
     2101 atttttaatt ttgcaagatc ccgtcattca gggtcattgg ctttggtctc gggagatgga
     2161 gatgaggttg tccctagcca gagcagcagc agagaaactg agaggagtcg ccctcacaga
     2221 agcttattct ccgtggagtc cgatgacact gacacagaaa atgagagaag ggatacggcg
     2281 ggagcatcgg gtggggttgc agcaccgttg ccccagaagg tccctcccac gaccgccgtg
     2341 gaggccacag tgggatcagg tgggaattcc tctgctcaga gcaccagagg tggccatgca
     2401 gatggaaggg aagtgtcaag tgtggaagcc ccgagtgtga gcccagcacg tcaccagctc
     2461 acaagtgctt taagtcggat gactcagggc ctgcgctggg tccgctttac actaggtcga
     2521 tcgagctcca ctacccagaa ccggagtcct ttgagacagc tggacaccgc agtgagtgga
     2581 cgagaagacg acgatgacgt cgaaatgcta attccagttt cagacggagc ttcggacatt
     2641 gatgccaatg actgctccag acctcttctt gaccttgcct cagaccaagt acaagggttt
     2701 agacagccac acagtgcagg aaaccctgga gtgagaacaa gtaaccggga cggcccctgc
     2761 gagcgctgtg gcattgtgca cacagcccag ataccagaca cttgcttaga agccacagtg
     2821 aagacggaaa cgagtgatga cgaggctttg ctgctgtgtt aggacagaat cgccagactg
     2881 tatgcaagct ggagcaatat ccactcactg ttttgtaact ttacaattaa actagtttta
     2941 gtttaaaatg aaaagatgca gggtgatttc ttattatatg ttagcctgca tggttaaatt
     3001 taacaatgtg taactctagg agctagagtt tgctgtttta gcagctaaaa atgcattatg
     3061 tattcgtagt cttcagtcat gttcttccgt ttgcttatac ctggttttgt tttgtttttt
     3121 taaatcctgg tacttaagtt taatagtaga aatatggctg ctttattcat gtaactgcca
     3181 ttttatctat cttatgttaa aaggttggtt tgtacaaaac ggtaccttct ttccattgac
     3241 tcttggatgc tctttgccat catgtaactt attatactag atgctgaggt tgttaatgta
     3301 caaaaaagga gacagctcct tagagtcacc tctttgtttg cataacactg tctgctagta
     3361 gatttcatca tatggacctg tcgcaggcaa agaatctgct ctctcattca acacacagtg
     3421 atgtaaaagt tccgtggcgt tcgagaaaat tgctgtcggg aaacaaaact cttttataga
     3481 ttttctaatg ctgactttac tactctggtg tggttcagac caaatggtga aatcccaaca
     3541 cgtttctgtt ttcatctcaa tttagggaca gaagtaagcg gatgaagatt ctctactatg
     3601 cattacattt tgaactttat aaaataggta cagaaattgt acccgctcag ctccacgggg
     3661 taatgtcttt ccctgacacg gaggtttgcc tgagttggac cctagggatt tgcactacag
     3721 tcctgtcaag gtctcagatg agtttagcgc acaggcactg tcacagcagg tactgtcatt
     3781 gctaccacag tgacgttata tttccatagc tttggggctg ggggaccatt tttattacaa
     3841 cttgaaattg ctttgctggt ttcatattta tttgttgtat ttaaaaactg cattattgtg
     3901 agagtgattt ttttccagga tattttattc ttgggggagg gggtcagtgc tataatcttg
     3961 aagaaaagca aattaaagtg ttcagattgc cccccctctt taagtagagg gaattacaag
     4021 ccccatttat ttttctttaa ttgttaattc ttgtttattt attccttagc tgtctgtttt
     4081 agcagcttaa tgattgggta tgaaatgtgt ttgtgtgtga ttatcgctat ttattacacc
     4141 ttcagtactt tgctgaatgt cattttaaag catgtttgag gtcttgtgta tctgtcctgt
     4201 tatgctgtca ggaagacctg acgaaaatgt tttaatatgt atcaaaaatt aaaataattt
     4261 tttttattgc cttgaggta
//
