LOCUS       NM_001081150            3775 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus LON peptidase N-terminal domain and ring finger 1
            (Lonrf1), mRNA.
ACCESSION   NM_001081150 XM_146279
VERSION     NM_001081150.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3775)
  AUTHORS   Li,D., Wang,T.W., Aratani,S., Omori,S., Tamatani,M., Johmura,Y. and
            Nakanishi,M.
  TITLE     Transcriptomic characterization of Lonrf1 at the single-cell level
            under pathophysiological conditions
  JOURNAL   J Biochem 173 (6), 459-469 (2023)
   PUBMED   36888978
  REMARK    GeneRIF: Transcriptomic characterization of Lonrf1 at the
            single-cell level under pathophysiological conditions.
REFERENCE   2  (bases 1 to 3775)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC153007.4.
            
            On Feb 8, 2019 this sequence version replaced NM_001081150.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7974084.14017.1,
                                           SRR7652917.36132.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-793               AC153007.4         101916-102708       c
            794-912             AC153007.4         89338-89456         c
            913-1035            AC153007.4         87249-87371         c
            1036-1185           AC153007.4         84387-84536         c
            1186-1426           AC153007.4         83632-83872         c
            1427-1523           AC153007.4         83430-83526         c
            1524-1638           AC153007.4         82485-82599         c
            1639-1760           AC153007.4         78906-79027         c
            1761-1919           AC153007.4         76213-76371         c
            1920-2082           AC153007.4         75965-76127         c
            2083-2235           AC153007.4         73175-73327         c
            2236-3775           AC153007.4         69411-70950         c
FEATURES             Location/Qualifiers
     source          1..3775
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 23.05 cM"
     gene            1..3775
                     /gene="Lonrf1"
                     /note="LON peptidase N-terminal domain and ring finger 1"
                     /db_xref="GeneID:244421"
                     /db_xref="MGI:MGI:3609241"
     exon            1..793
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            794..912
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            913..1035
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1036..1185
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1186..1426
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1427..1523
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1524..1638
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1639..1760
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1761..1919
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            1920..2082
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            2083..2235
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     exon            2236..3775
                     /gene="Lonrf1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3754..3759
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lonrf1"
                     /note="hexamer: AATAAA"
     polyA_site      3775
                     /gene="Lonrf1"
                     /note="major polyA site"
ORIGIN      
        1 gcgcgccacg cccccctgct cgccggccgc gtgcggagcc gcgcgccccg gaggttcccg
       61 gaccgtggcg gcgggcggcg gcggcagagc agccctgtgc gggccatgtc ttctccggcc
      121 gtggcgaggg cgtccccggg cgggaatcgg gaggcgtccg gcggaccgcg gagccggaac
      181 gggccgtggg aagtgggcgg cggcggcgag cggttggagc gcgcgggcgc ggagtcgggg
      241 cgctgggagc ttctgctccg ccgcggagag ctgctggcgc tgggcggcca cctgaaggga
      301 gcgctggagg cgttcgcggc tgcgctgcgc cgcggggccc cggccaggcc cgagcgcctc
      361 gggtcgctag tggactgcct ggtgttcagc taccggctcc gccacgggct gcgctggagc
      421 gcggcacccg cggcgggcgc ggccgggctg ctcagctgcc tgagctgccg gggcttccta
      481 agcgagccgg tgaccgtgcc gtgcggccac agctactgcc gccgttgcct acggagggag
      541 ctgcgcgccc gctgccgcct gtgccgggac cgcctgccac ccgccgccgc cgcctcggag
      601 gggaccccgc ggccgccgcc cctggccgcc gccatcgccg acttccgaac cagcgtcgtg
      661 ctcaaccacc tggcggagaa gtggttcccg ggccagcgcg agcgcgcgcg ggcggccggc
      721 cgcctcgggg aactgctgca cgaagggcgc taccgggagg ccctggccgc cgcctgcgac
      781 gccctgcgag cagagcccag cgacctgact ctcaaaatct acagagcgga gtcgtacgcc
      841 ggcctgcagg agtttaaggc ggccctagag gatctgaacg cagttctctt tcagcttccc
      901 aactggcccg aggtctactt caggaaaggg aaggtcctcc aggatgccgg ctttctaggc
      961 gatgccttac agctctttct tcagtgctta gccctcgatg aagacttcgc gcccgcaaag
     1021 ctacaagtag aaaagattct gtgtgactta ctgtcacctg aaaatgtaag ggaaggcctg
     1081 aaggagtctt cctggagttc gttaccgtgc attaagagca aacctcttgg ttttccatca
     1141 gtaatggagc agccacactc ccctgctgag cttggcctga agcagcctga agaacgagtg
     1201 gaggatgccc cagagcctgt caaaggaagc ttaagccgcg cccagtcagc acaagccatc
     1261 agtgcagcgg cagtgcctgc cagggaggac ggtttaaagc gcgtgtgctc agaaccctta
     1321 ctgtccgccc agggaaaggg ggtcctgctc aaacgaaagc tgtctctctt agaacaggac
     1381 gtgcttatta acgaagacgg gaggagtaag ctcaaaaagc aaagcgaatc tcccagtgaa
     1441 gactgtatgt tttcaatagc ttatggcgac atcccagaag aactaatcga cgtctcagac
     1501 tttgagtgtt ctctctgtat gaggttgttt tttgagccag taacaacccc ttgtggacac
     1561 tcattctgta agaattgtct tgagcgttgt ttagatcatg cgccatattg tcccctctgc
     1621 aaagaaagct taaaagagta tctagcagac aggaggtact gtgtcaccca gctgctggag
     1681 gagttaatag tgaaatacct gccagatgag ctgtccgaga ggaagaaaat ctatgatgaa
     1741 gaaactgctg agctctcaca cttgaccaag aatgtcccaa tattcgtttg cactatggcc
     1801 taccccactg tgccttgccc actccatgtg ttcgagccca gatacaggct catgatccga
     1861 aggagtatcc aaactggaac caagcagttc gggatgtgcg tcagtgatac acaaaacagt
     1921 tttgcagatt atggttgtat gctacaaatc cgaaacgtgc atttcttacc tgacggaagg
     1981 tctgttgttg acacagttgg agggaagcgg ttcagagttc taaaaagagg aatgaaagat
     2041 ggatattgca ctgcagacat tgagtatcta gaagatgtta agattgagaa tggagatgaa
     2101 ataaggagcc tgcgagagct ccatgactcg gtgtactcgc aagcctgcag ctggtttcag
     2161 aatttaaggg acagatttcg aagccaaatc cttcagcact ttggatcaat gcctgagaga
     2221 gaagaaaacc tccaggcaac acccaatgga cctgcatggt gttggtggct gctggcagtc
     2281 ctccctgtcg acccgagata tcagctctcc gtactgtcca tgaagtcttt ggaggaacgg
     2341 ttgacgaaga tacagcatat tctgacatac ttttctagag accagtctaa gtaacgaact
     2401 gcctggatct cacttagctc gctctcagcc cagaggccga gatgcgcggc tggatcttaa
     2461 cttttaacgt cgccctgatc tggctccagt tgacagccgg attgcccgct gccttttgca
     2521 cacccagtgc tggtttaaga aatcaaggaa acttttcttt tctttaaacc tcctgaatct
     2581 cgtggatctg caaatgaata ccttcaacta ggtcccagac cactaagaac ttgcacagaa
     2641 aacacgcact gaatgtgtgt taaacctcga cattgtgatg aagttgcact atgtaccata
     2701 ttctgaatga actaagaact ccgtggatgt gtgacgtgtg tgtgtgtgtg tgtgtgtgtg
     2761 tgtgtgtgta tatgtgtgtg tggtgtgtgt atgtgtgtgt gtgtgtgtgt gtgtgtgtgt
     2821 gtgtgtgtgg tgtggtgtgt gtggagtgta tgtgtgtgtg tgtgtgttgt gtgtgtgtgt
     2881 gtgtgtgtgt gtatgtgtgg gggggtgtgg ggggtgtgtg tatatgtgtg tgtgtgtgtg
     2941 cttttttctc tggctttaaa ttttaaaaga caaaaaaaaa aaaaagccat agggagcgga
     3001 cttgctgaag gccctctgct gcccatgttt acagcggtag tcataggagt tttcgcaggt
     3061 tgactttgcc tcagatttat tcccccatgc ttctctttgc acaagtatgt aaactacggt
     3121 ctagagtatc attttttctg ttggaaatcc tgctcttgct gaactgtctt ggccgttgac
     3181 tttgacacag ttaattattt atgtaaatac atgcatccca gtagccggca ggcagggatg
     3241 ctgaatctcg agccagtctc caggaacaac tgcaaacctg acacatggta ctgtgcatcc
     3301 attcataaaa cacttaaaac tgtgaaaata tggtttacat taaaaatgta cataaaggta
     3361 gacggagaac tcgattcagc cagttagctt gtacatttta gggggctttt cacattaact
     3421 gcccgtctat gtcatttaga gtttgacacg ataacttgta tttaaggaat tatgtagtgt
     3481 ataaatcggt cgaggatctg ggggaggtgg agaagcttac tgtaggactc agcttgtaag
     3541 gttcgttttg ttttgactct ggtcttggtg caaatgttag ttatgcctta ttcataccag
     3601 ttagagcacc gtgctgtgac atgggtatat ccgtgctgcc cggccctttt ataattattt
     3661 gttgcagatt tgtgactgtc tctattaact ttcttttatg taagtaattt gtacaagttt
     3721 cttaagattt ttgcttttgc ttatttaatt ttgaataaaa gctaaattca taata
//
