LOCUS       NM_001347042             793 bp    mRNA    linear   ROD 11-OCT-2020
DEFINITION  Mus musculus leukemia NUP98 fusion partner 1 (Lnp1), mRNA.
ACCESSION   NM_001347042 XM_006522828
VERSION     NM_001347042.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 793)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT009577.5.
            
            On Nov 15, 2016 this sequence version replaced XM_006522828.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on EST and RNA-seq alignments and orthologous
            data.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.694984.1,
                                           ERR3363658.1477302.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-174               CT009577.5         112183-112356       c
            175-405             CT009577.5         101748-101978       c
            406-793             CT009577.5         98517-98904         c
FEATURES             Location/Qualifiers
     source          1..793
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 34.22 cM"
     gene            1..793
                     /gene="Lnp1"
                     /gene_synonym="Gm19797"
                     /note="leukemia NUP98 fusion partner 1"
                     /db_xref="GeneID:100503609"
                     /db_xref="MGI:MGI:5011982"
     exon            1..174
                     /gene="Lnp1"
                     /gene_synonym="Gm19797"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..549
                     /gene="Lnp1"
                     /gene_synonym="Gm19797"
                     /codon_start=1
                     /product="leukemia NUP98 fusion partner 1"
                     /protein_id="NP_001333971.1"
                     /db_xref="CCDS:CCDS84244.1"
                     /db_xref="GeneID:100503609"
                     /db_xref="MGI:MGI:5011982"
                     /translation="MEHRDDDDDNDDVSFAKWMSSFWGHSWRDKDERGLRDHQQLQEA
                     SYRKASLPCPFPAFPSITSSDCHPRRHSHEDQGSRSHLPTRHHRKCSVDGSLREPTES
                     QRRAHSKMQEFSESFERHLCLQTKPSHSVGPKGKKERDERHCLETTMRSYKRVEDRRS
                     SVKDGDGPMDPLIERGPE"
     exon            175..405
                     /gene="Lnp1"
                     /gene_synonym="Gm19797"
                     /inference="alignment:Splign:2.1.0"
     exon            406..793
                     /gene="Lnp1"
                     /gene_synonym="Gm19797"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aatcccattt ccatggagca cagagatgat gatgatgata acgatgatgt gtcctttgcc
       61 aagtggatga gcagcttttg gggtcacagc tggagagaca aagatgagcg aggactccgg
      121 gaccaccaac aactacaaga agcaagctac aggaaggctt cgctaccctg cccatttcct
      181 gcatttccca gcattacgtc atctgactgc caccctagaa gacattctca tgaggaccag
      241 ggatcccgaa gccatcttcc cacgcggcat cacagaaaat gctcagtgga tggatcactc
      301 cgggagccaa cagaatcaca aagaagagcc cattccaaaa tgcaggaatt ttcagagtcc
      361 tttgaaagac acctgtgcct tcaaaccaag ccctctcatt ctgtgggacc caaggggaag
      421 aaggagagag atgaaagaca ttgcctagag actaccatga gatcctataa gagggtggag
      481 gacaggagga gctcagtgaa ggatggagac ggacccatgg atcctctgat tgaaaggggg
      541 cctgagtaac acttcatttc aacattgcca atgacagacg tcactggttg ttcagagacc
      601 tagaacttcc tgcagaatga catctggaaa gggtattagc agatgttgag acaaaagtga
      661 gcagttagaa tggctgcttt tcaacatgat ttgtgttttg ctccaactgc ccctggcatc
      721 ttgagtgtac aatgtttatg tctttctgtg gtaagaagaa aaagtatttg aataaaataa
      781 aggaattcct gat
//
