LOCUS       XM_006519192            5128 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus LIM domain only 7 (Lmo7), transcript
            variant X49, mRNA.
ACCESSION   XM_006519192
VERSION     XM_006519192.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000080.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006519192.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5128
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="14"
     gene            1..5128
                     /gene="Lmo7"
                     /gene_synonym="FBXO20; Gm914; mKIAA0858"
                     /note="LIM domain only 7; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 41 ESTs, 314 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:380928"
                     /db_xref="MGI:MGI:1353586"
     CDS             241..4338
                     /gene="Lmo7"
                     /gene_synonym="FBXO20; Gm914; mKIAA0858"
                     /codon_start=1
                     /product="LIM domain only protein 7 isoform X47"
                     /protein_id="XP_006519255.1"
                     /db_xref="GeneID:380928"
                     /db_xref="MGI:MGI:1353586"
                     /translation="MEGMEDAEADCSVAFAEAQRWVEAVTEKNFETTDFRASLENGVL
                     LCDLINKLKPGVVKKINRLSTPIAGLDNINVFLRACEQIGLKEAQLFHPGDLQDLSNR
                     VTVKQEETDRRLKNVLITLYWLGRKAQSNPYYNGPYLNLKAFETLLGQALTKALEDSS
                     CLKRSGRDSGYGDIWCPDRGEFPAPPGSHRREDSFESLDSLGSRSLTSCSSDFTLRVG
                     KEGCESDIDWEFTFKMQDYNKDDMSYRRISAIEPKSALPFNRFLPNKSKQPSYVPAPL
                     RKKRPDKHEDNRRSWASPVYTETDGTFSRLFQKIYGENGSKSMSDVSAEDVQNLRQVR
                     YEEMQKIKSQLKEQDQKWQDDLAKWKNRRKSYTSDLQKKKEEREEIEKQALEKSDRSS
                     KTFREMLQDRESRGSTVTSWRRTYSSDDILDDGVLPPTVTLSETSYQSERLEDEARAH
                     PAEMPKEDSTTFANREDSVVAETQLASHSPEEQRLAPSPSEEPRQASGSSAEPHQAPL
                     LSTEPRRTPLPSEEPHQASLSSTLQRPSSLSSQQSWSTRAESTRISASLPRSYQRTDT
                     ARLTSVVTARPFGTSSRGISSLPRSYTMDDGWKYNGDVEVVKREQLDLGRATGPKPDS
                     SHFISGSASEKEVIATEDVASLSSPTLPSSSLSHDRAVSSKATFSSMSGLDSVSDSGE
                     GRGSPLREVSRSLDQFSDMRVSINQTPGNKPVFGFTIKWDISGIFVASVEQGSPAEFS
                     QLQVDDEILAINNTKFSYKDTKKWEEVMANAQETGNLVMDVRRYGKSGSSETKWIDTT
                     SGIYNSDKSSSLSVTTDFSESLQSPYTESKEVNGIHEESNPFDSKASESISLKNLKRR
                     SQFFEQGSSDSVAPDLPVPTLSAPSRWAWDQEEERRRQERWQKEQDRLLQEKYQREQE
                     KLREEWQRAQQEAERENSKYLDEELMVLNSNSISLTSREPVAATWEATWSEGSKSLDS
                     EGTRAGEEDRGQLEDDAVYEDQSQKLQELEQEKKRKEQEAQEEERRKQREAQAWAEAE
                     AKAWAEAQARAEAEAKARAEAQARAEAEAQKRAEAQKLQAERERETSVKIYQYRRPID
                     SYDLPKREDDTSGMLPTDRSKSRSTTELNDPLIEKNGSSKYSERIGATSFSHRSSKKD
                     QAPSEAELERQQILQEMRKRTSLHNDNSWIRQRSASVNKEPICLPGIMRRGESLDNLD
                     SQRPGSWRQSPWHSQPAGVYASSSVQDFSRPPPQLLSTSNRAYMRNPSSAVPPPAGSV
                     KTSPGSPSPRSHSPSMSQSGSQLRNRSVSGKRVCSYCNNILGKGAAMIIETLGLSYHL
                     HCFKCVSCGCDLGGSSSGAEVRIRNHQLYCNDCYLRFKSGRPTAM"
ORIGIN      
        1 tcccaggagt cccggctcct tctgcacacc gcttccagtt gcctcttcac ctcctcctgc
       61 tccagtcagg ctgaacttga gccgatttct agagtttgga gaaagcaact cctgcaaatt
      121 cttctaggtt cctgaactca aactgcacgt cgctacaaag ggcgggggac gcgtggcgtg
      181 ggagctctgg gtcccggcgc gcacccactg agctgctcct ctccctctct tgccctagac
      241 atggaaggga tggaggacgc cgaggccgat tgctctgttg cattcgcaga ggctcagaga
      301 tgggtggagg ctgtaactga gaagaatttt gaaacaacgg attttcgagc ctctctagaa
      361 aatggtgttc tgttgtgcga cttgattaat aagctcaaac ctggcgtcgt taagaagatc
      421 aatagactgt ctaccccaat agcaggtttg gataacataa atgttttttt gagagcttgt
      481 gaacagattg gattgaaaga agcccagctt tttcatccgg gggatctaca ggacttatca
      541 aaccgagtca ccgtcaagca agaagagact gacaggagac tgaaaaatgt tttgataact
      601 ttgtactggc tgggaagaaa agcacaaagt aacccctact ataatggtcc ctatctcaat
      661 ttgaaagctt ttgagactct tttagggcaa gctttgacta aggcacttga agattccagc
      721 tgcctgaaaa gaagtggccg ggacagtggc tacggggaca tctggtgtcc tgacagagga
      781 gaatttcctg cccctccagg tagccacaga agggaagatt cctttgagag cttggactcg
      841 ctggggtcca gatctctgac cagctgttcc tcagacttca ctctgagagt tgggaaggaa
      901 ggttgcgaaa gtgacatcga ttgggaattt acattcaaaa tgcaggatta caacaaagat
      961 gatatgtcct accgaaggat ttcagccatt gagccaaagt cagctctccc gttcaatcgt
     1021 ttcttgccga acaaaagcaa gcagccgtcc tatgtgccag cacctttgag gaagaagagg
     1081 ccagacaaac acgaggataa caggaggagc tgggcaagcc cggtctacac agaaacagac
     1141 ggaacatttt caagactctt tcaaaagatc tatggtgaga atgggagcaa gtccatgagc
     1201 gatgtcagcg cagaggatgt tcagaacctg cgtcaggtgc gctacgagga gatgcagaaa
     1261 ataaaatccc agctgaaaga acaagatcag aaatggcagg atgaccttgc aaaatggaaa
     1321 aaccgccgga agagttacac ttcagatctg cagaagaaaa aggaagagag ggaagagatt
     1381 gagaagcagg cactggagaa gtctgaccgc agctccaaga catttaggga aatgctgcag
     1441 gacagggaat ctcgaggttc tacagttacg tcttggagga ggacctattc ctctgatgac
     1501 atcctcgatg atggagtgct ccctcctaca gtgactctgt cagaaactag ttaccagagc
     1561 gagagactag aagatgaggc aagagcgcat cctgctgaga tgcccaaaga agattccaca
     1621 acatttgcaa atagagagga cagtgtagta gctgagactc agcttgcttc tcacagtcct
     1681 gaagagcaac gtctggcccc ttctccttct gaggaaccgc gccaggcctc tggatcttct
     1741 gcagaaccgc accaggcccc gttgctgtcc acagaaccac gccggacccc tttgccttcc
     1801 gaggaaccac accaggcctc tctatcttct acactacagc gtccatcctc actctcttct
     1861 cagcagtcat ggagtacaag agcagagtcc actcggattt cagcttctct ccctagaagt
     1921 taccagagaa ccgatacagc caggttaaca tctgtggtca cagcgagacc ttttggcaca
     1981 tcttcaaggg gaatctcctc actgcccaga tcctacacga tggatgatgg ctggaaatac
     2041 aacggagatg ttgaagttgt caagagagag caactcgatt tgggcagagc cactggcccg
     2101 aagcctgact ccagccactt tatttcgggc tcagccagtg agaaggaggt catagccaca
     2161 gaagatgtgg caagcttgtc ctctcccaca ctcccttcct catctctctc ccacgaccgg
     2221 gcagtctctt ccaaagccac gttctcatca atgtctggtt tggattcagt gtctgactct
     2281 ggagaaggaa gaggctcacc attgagggaa gtttccaggt ccctggatca gttcagcgat
     2341 atgagagtca gcataaacca gacgcccggg aacaaacctg tctttgggtt tacgataaaa
     2401 tgggatattt ctgggatctt cgtagcatca gtcgaacaag gtagcccagc agaattttct
     2461 cagctgcagg tagatgatga aattcttgcc atcaataaca ccaagttttc atataaggat
     2521 acaaaaaagt gggaggaagt tatggcaaac gcccaagaaa ctggaaactt agtgatggac
     2581 gtccggcgtt acggaaagtc tggttcatct gaaacaaagt ggatcgatac aacatcagga
     2641 atttacaact cagacaagtc ttcaagttta tcagtcacaa ctgatttctc tgaaagcctt
     2701 cagagtcctt atactgaatc caaagaagtc aatggaattc acgaggaaag taaccccttt
     2761 gattcaaaag catcagaatc catttctttg aaaaatttaa aaaggcgatc acaatttttt
     2821 gaacaaggaa gctcggattc tgtggccccc gatcttccag ttccaaccct cagtgccccg
     2881 agtcgctggg cttgggatca agaggaggag agacggaggc aggagcggtg gcagaaagag
     2941 caagatcgcc tattgcagga aaaataccag cgtgagcagg agaagctgag ggaggagtgg
     3001 cagagagccc aacaggaggc ggagagagag aattccaagt acctggatga ggagctgatg
     3061 gtcctaaatt ccaacagcat ttctctgacc tcccgggagc ctgtggccgc cacctgggaa
     3121 gccacgtgga gtgaagggtc caagtctctg gacagcgaag gcacccgagc gggagaggag
     3181 gacaggggac agctggaaga cgatgctgtg tatgaggacc aaagtcagaa gctgcaggaa
     3241 cttgagcagg agaagaaacg gaaggagcaa gaggctcagg aagaggagcg ccgcaagcag
     3301 cgggaggccc aggcctgggc agaggcagaa gctaaggctt gggcggaggc ccaggctcgg
     3361 gcagaggcag aagctaaggc tcgggcggag gcccaggccc gggcagaggc tgaggctcaa
     3421 aaacgagctg aagctcagaa gctccaggca gagagggaac gtgaaacgtc cgtcaaaata
     3481 taccagtacc gaaggcccat tgattcctac gacctaccaa agagagaaga cgacacttca
     3541 gggatgcttc caactgacag gagtaaatca agatctacta cggaactaaa tgaccccctc
     3601 atagagaaaa atggaagcag caaatattca gagagaattg gggccactag cttttcacat
     3661 aggagttcta agaaggatca agccccctca gaagcagagt tggagagaca gcaaatcctt
     3721 caggaaatga ggaagagaac atctctccac aatgacaaca gctggatccg acagcgcagc
     3781 gccagtgtga acaaggagcc catctgcctg cctgggatca tgaggagagg ggagtctctg
     3841 gacaatctgg attcccagcg gccgggttct tggaggcagt ccccttggca cagccagcct
     3901 gccggggtct atgcgtcttc ctctgtccag gacttcagtc gccccccacc tcagctgttg
     3961 tctacatcaa accgtgccta catgcggaac ccatcctctg cggtgccacc tccagccggc
     4021 tctgtgaaga cctccccagg gtctccctct ccacgcagcc attccccttc catgtcacag
     4081 tcaggctctc agctacggaa taggtcagtg agtgggaagc gtgtgtgctc ctactgtaat
     4141 aacattctgg gcaaaggagc cgccatgatc atcgagaccc tgggtctttc ttatcattta
     4201 cattgtttta agtgtgtctc ctgtgggtgt gacctcggag gctcttcctc aggagctgaa
     4261 gtcagaatcc gaaaccacca actctactgc aatgactgct atctccgatt caaatctgga
     4321 cggccaaccg ccatgtgatg taaaccccca ttcgaaagcg ctgttgcaga tagaagagga
     4381 ggcgcttgtc actgatgcag agctataaaa aaaaaaatgc tggatggttt tttcccctct
     4441 tttttttttt taaaggaata atcattgcct cgttaaatga cataggaaca ctgtggtgtt
     4501 ggtaggacct gtatttttgt tgtttattta taagaaggta attatgtgtg tgtgtgtggg
     4561 ggggggagga gtgcagtatt gaccttttaa attcagcatc ctaaaagcac aagtggaaaa
     4621 gaaaactaaa caaagctcaa gaacttaaaa tccttctcat actcatatga ttaatgatct
     4681 cgtttgactc tctagtggtt tttcgaagaa ggtattttat tttaattttt taagttctta
     4741 aacattattt gaaatagtta atataaatgt gtaactgtgt ttgtttatta taatgtattc
     4801 taagttaatg tggatccata tgaaaaattt cacttaaatc cactcataaa tttgcttctt
     4861 ttgtggtttt ctttacacgg aaataatcca attgaaaaat aattttgcct ctctgtaatg
     4921 ttttattggt ttgaggaggg cactcaattt tctttacaag gactgttgat gctaagcaaa
     4981 tgccaggaga gggctgttta ctttcagtaa tgaaaaatat ccatggcttg tataccagtg
     5041 atttcctcca gaaacacgtg agctcttctg ttccgctgcc tttgtaaata aacttggtga
     5101 tgcatttaag gaatgctttt taaaactc
//
