LOCUS       NM_001382822            2082 bp    mRNA    linear   ROD 07-APR-2024
DEFINITION  Mus musculus lamin tail domain containing 2 (Lmntd2), transcript
            variant 3, mRNA.
ACCESSION   NM_001382822 XM_006536256
VERSION     NM_001382822.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Zheng,S., Damoiseaux,R., Chen,L. and Black,D.L.
  TITLE     A broadly applicable high-throughput screening strategy identifies
            new regulators of Dlg4 (Psd-95) alternative splicing
  JOURNAL   Genome Res 23 (6), 998-1007 (2013)
   PUBMED   23636947
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC108908.16.
            
            On May 22, 2020 this sequence version replaced XM_006536256.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219382.226143.1,
                                           SRR5189685.130710.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                AC108908.16        34807-34844
            39-242              AC108908.16        35202-35405
            243-395             AC108908.16        35493-35645
            396-483             AC108908.16        35990-36077
            484-639             AC108908.16        36198-36353
            640-711             AC108908.16        36622-36693
            712-800             AC108908.16        36795-36883
            801-1072            AC108908.16        37224-37495
            1073-1163           AC108908.16        37711-37801
            1164-1353           AC108908.16        37918-38107
            1354-1473           AC108908.16        38187-38306
            1474-1670           AC108908.16        38392-38588
            1671-1920           AC108908.16        38749-38998
            1921-2082           AC108908.16        39075-39236
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 86.5 cM"
     gene            1..2082
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /note="lamin tail domain containing 2"
                     /db_xref="GeneID:72000"
                     /db_xref="MGI:MGI:1919250"
     exon            1..38
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            39..242
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..2052
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /note="isoform 2 is encoded by transcript variant 3; lamin
                     tail domain-containing protein 2"
                     /codon_start=1
                     /product="lamin tail domain-containing protein 2 isoform
                     2"
                     /protein_id="NP_001369751.1"
                     /db_xref="GeneID:72000"
                     /db_xref="MGI:MGI:1919250"
                     /translation="MAPKSCQESEDKQVSPAPAGVQPDSSDLGSPVGTPVDRVAPSYS
                     QSAKLYTSTPMGCSVKQQLAPETLDPRTLRLLWEQRELEIQALRWAVQNGHNARYSSI
                     LQEVAGVPSERNSKSQDKFLRNQVQKLTLELKAQKEQAQQEKQQLEEKLQQNLWAKQQ
                     LEAELQTFQKSCLLQLARSSWVGRVLRSQTGSVEVVTTEVLRDPSDFSESAEIPTSGE
                     GFPLEDVDWNSIAQRYPNLFSNLNFYSDQKQSQPPTSETYTLDSEGATKHTEKPTKIL
                     EWSALPLLDTSSSERTQSDTSSCPIALHSGAKKTTGHPSQGTNLASSEQMQEHTRSFS
                     GYTEDLCKSHSPSCSKTVLESYTDLHHPYTRPQLNPFGCCLKIAAVSHREKFIRVINQ
                     SQAETIDLGGFVLQQLVRDFPVCMYRFPPGTLLAPQHHITVWGEGTSRTKKQLPVASG
                     QDPFQFQSSRGCVTVLVNPQGQVLSEHQATPCVTLGSKIFTDNTDWSIDCFPLSESEP
                     DVHPGEQQCRPSSPQKGRAKDAGARRKKPGPGVRQHRHSSTSGLRASRTLHPTETRDI
                     LPLLSSRKLLPSGEVLTQQEGVKAETSELLPVIPECPSRLCLGEDSLGRQEYKVQVCR
                     KSVDLSCPMVALSVQNTAESRYGFRFLCYPPITEELCRRL"
     exon            243..395
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            396..483
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            484..639
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            640..711
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            712..800
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            801..1072
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1163
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1164..1353
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1354..1473
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1474..1670
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1671..1920
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1921..2082
                     /gene="Lmntd2"
                     /gene_synonym="1600016N20Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcttccttcc ctaggccttc tgtgggttta ggcctcagct cctgagcaac atcaagcatg
       61 gcccctaagt cttgccagga gtctgaagat aagcaggtat ccccagctcc agcaggtgta
      121 cagccagaca gcagtgactt agggtctcca gttggcacac ctgtcgacag agtggctcct
      181 tcctattctc agagcgctaa gctctacaca tccacaccaa tgggctgctc cgtcaagcag
      241 cagttagccc ctgaaaccct ggacccacgt accctgaggc tcttatggga acagagagaa
      301 ctagagatcc aggcacttcg gtgggctgtt cagaatggcc acaatgcccg atactccagc
      361 atcctgcaag aggtggcagg ggttccctct gagcggaact ccaaaagtca agacaaattc
      421 ctgcggaacc aggtccagaa gctaaccctg gagctgaaag cacagaagga acaagctcag
      481 caggagaaac agcagttaga ggagaaactg cagcagaacc tctgggcaaa gcagcagctg
      541 gaggctgagc ttcagacttt tcaaaaatca tgccttctgc agctagcccg ttcctcttgg
      601 gtgggacgcg tgctgaggtc tcagaccggc agcgtcgagg tggtcactac agaggttctg
      661 agagacccca gtgacttttc tgagtctgct gagattccca cttctgggga gggtttcccg
      721 ttggaagatg tagattggaa cagcattgcc cagcgatatc ccaacctctt ctccaacttg
      781 aatttctatt cggatcaaaa gcagtcccag cccccgacct ccgaaacgta taccttggac
      841 tcggagggcg ccaccaagca cacagagaag cctaccaaga tcctggagtg gagcgccttg
      901 cctttgttag acaccagtag ctcagaaagg acccagtctg acaccagcag ctgcccgata
      961 gctctgcatt ctggagcaaa gaagacgact ggccacccat cccagggaac aaatttagct
     1021 tcttctgagc agatgcagga acacactagg agcttcagtg gatacacgga agatctctgt
     1081 aagagccatt caccctcgtg tagcaagact gttttggagt cctatacaga ccttcaccac
     1141 ccatatacaa gaccccagtt gaacccattc ggctgctgct tgaagatcgc tgctgtcagc
     1201 caccgagaga agttcatccg cgtcatcaac cagtcacagg cagagacaat tgacctgggt
     1261 ggctttgttc tgcagcagct tgtgagggac ttccctgtgt gcatgtaccg cttcccaccc
     1321 ggtactctgc tagccccgca gcaccacatc acggtatggg gcgaaggaac cagcaggacc
     1381 aagaagcagc tgccagtggc ctcaggccag gaccccttcc aattccaatc tagccgaggc
     1441 tgtgtgacag tgctagtcaa cccccagggt caggtcctca gcgagcacca agccacaccc
     1501 tgcgtgactc tgggctcaaa gatcttcacg gacaacactg actggtccat tgactgcttc
     1561 ccgctctcag agtctgagcc tgatgttcac cctggtgaac agcagtgtcg accttcatca
     1621 ccacagaagg gtcgggcaaa ggatgctggg gccaggcgca agaagccagg gccaggtgtt
     1681 cgtcagcaca ggcactccag cacaagcgga ctgagggcct cacgaactct tcaccccaca
     1741 gagacccggg atatcttgcc actcctaagt tcccgaaagc ttcttccctc tggggaagtc
     1801 cttacacagc aggaaggtgt gaaggctgag acgtcagagc tcctgcccgt gatcccagag
     1861 tgtccctcca gactgtgtct tggtgaggac tcactgggta ggcaggagta caaggtccag
     1921 gtgtgccgga aaagcgtgga cctgagttgc cccatggtgg ccctgtcagt ccagaacaca
     1981 gccgagagca gatacggctt ccgcttcctc tgctaccctc ccatcactga ggaattgtgt
     2041 cggcggttgt aggtcagcca ggccaggcag gcagtgacaa ct
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