LOCUS       NM_001417829            1587 bp    mRNA    linear   ROD 14-JUN-2024
DEFINITION  Mus musculus LLP homolog, long-term synaptic facilitation (Aplysia)
            (Llph), transcript variant 2, mRNA.
ACCESSION   NM_001417829 XM_006513954
VERSION     NM_001417829.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Yu,N.K., Kim,H.F., Shim,J., Kim,S., Kim,D.W., Kwak,C., Sim,S.E.,
            Choi,J.H., Ahn,S., Yoo,J., Choi,S.L., Jang,D.J., Lim,C.S.,
            Lee,Y.S., Kang,C., Choi,S.Y. and Kaang,B.K.
  TITLE     A transducible nuclear/nucleolar protein, mLLP, regulates neuronal
            morphogenesis and synaptic transmission
  JOURNAL   Sci Rep 6, 22892 (2016)
   PUBMED   26961175
  REMARK    GeneRIF: the characteristics and roles of previously unknown
            cell-permeable protein mLLP in modulating neural development.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC144942.4.
            
            On Mar 10, 2023 this sequence version replaced XM_006513954.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.950295.1,
                                           SRR13422590.393641.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-488               AC144942.4         36774-37261         c
            489-718             AC144942.4         36120-36349         c
            719-1587            AC144942.4         32252-33120         c
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 67.94 cM"
     gene            1..1587
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /note="LLP homolog, long-term synaptic facilitation
                     (Aplysia)"
                     /db_xref="GeneID:66225"
                     /db_xref="MGI:MGI:1913475"
     exon            1..488
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            489..718
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             496..888
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /codon_start=1
                     /product="protein LLP homolog"
                     /protein_id="NP_001404758.1"
                     /db_xref="GeneID:66225"
                     /db_xref="MGI:MGI:1913475"
                     /translation="MAKSLRSKWKRKMRAEKRKKNAPRELNRLKSILRVDGDALMKDV
                     EEIATVVVAKPRQEKMQCEEGRCDGADEEKDDMKMETEIKRNRKTLLDQHGQYPVWMN
                     QRQRKRLKAKREKKRGKSRAKAAKGLAW"
     exon            719..1587
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1155..1160
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1181
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /note="major polyA site"
     regulatory      1566..1571
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1587
                     /gene="Llph"
                     /gene_synonym="1190005P17Rik"
                     /note="major polyA site"
ORIGIN      
        1 agccggaagc gcctgtactt ccggttggcg tcccacgcgt ggtgcgcggt gttgtctctc
       61 aggtgagttg cgtgggcttt ggactcaact ccgcggcgtg aaggactggc tcggaccctg
      121 cctccgcggc gagacctgac cgcatcctcg ctcggtgcgg ggctcgggag ggcgaggctc
      181 ggggtcccgc acacggacca ctggtgattg ctgacgctca ggggacctca cccagccacc
      241 ccacggttct cgtgacctgt acggtgtgca gcagagcggt ggccccgggg gatccggctc
      301 agccccgcag tccgcagacg gggacggtag ctccgggttg aagccgaact tggtagaaag
      361 gagctgacag gagtcggagg atcagagcga gccttaggga gagccatttc cagacctaga
      421 tcggagatgt gacggtcctg aagtgggcgt tgtgcggact ggagcttgcg tgcgtgtggg
      481 gctagagagt gaagcatggc taaaagcctg cggagtaagt ggaagaggaa gatgcgggcc
      541 gagaagagaa agaagaatgc gccaagggag ctcaacagac tgaagagtat cctcagagtg
      601 gacggggatg ctctaatgaa agacgttgag gagatagcaa ccgtggtggt agccaaacct
      661 cgccaggaga aaatgcagtg tgaggaaggg cggtgtgacg gcgcagatga ggaaaaggat
      721 gacatgaaaa tggaaactga aattaagaga aacagaaaga ctcttctaga ccagcatggc
      781 cagtacccag tgtggatgaa ccagaggcaa agaaaaagac tgaaggccaa gagagaaaag
      841 aaacgaggga aaagcagagc aaaggccgcg aagggcctgg cctggtagac cttaaagact
      901 ggcaagggag acaggcgtgg tggtgcaccc ctttcatccc agcactcaag aggtggaggc
      961 aggtggatct ctgtgagttc aaggccagcc tggtctacag agcaattcca aagcacccag
     1021 ggctccatta cacagagaaa ccgtgtcttg aaaatacaag caaacaaaca aacaaaaaac
     1081 ccagaaactt tgttttcagt ttgtacttag ttctgtaatt caaaccaaaa taactcattt
     1141 gtgttagaaa cttgaataaa atctctttgg tgatgaaaga atgttatgct gaagttgtga
     1201 ttggatactg cctggcactg agtattgtaa gcattgatgt ggttataact atttgatctt
     1261 acagaatggc cattgtactc agttcctcag attaaacatg cttatatcaa aatagtatag
     1321 gcagaaagct attacattat catattcaaa aatagggtat caagagcctg aggaagagtc
     1381 aacttctgtt tcttgttggg tggctcaaaa ccaactccca aggatgcgcc ctcttgtggc
     1441 cgtcactggc accgacattc tatgcacacc ttcccacgca ctaataacta aaatagtctt
     1501 aaaaaggcca tcagtggatc ttaccagtag tacttacttg aagtgtttat ttttttataa
     1561 ttcataataa atgatatttt gcgtgga
//
