LOCUS       XM_036153460            3282 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lines homolog 1 (Lins1), transcript variant
            X10, mRNA.
ACCESSION   XM_036153460
VERSION     XM_036153460.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..3282
                     /gene="Lins1"
                     /gene_synonym="2700083B01Rik; Lins; Lins2; Wins2"
                     /note="lines homolog 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 3 ESTs, 215 long
                     SRA reads, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 25 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:72635"
                     /db_xref="MGI:MGI:1919885"
     CDS             887..2383
                     /gene="Lins1"
                     /gene_synonym="2700083B01Rik; Lins; Lins2; Wins2"
                     /codon_start=1
                     /product="protein Lines homolog 1 isoform X6"
                     /protein_id="XP_036009353.1"
                     /db_xref="GeneID:72635"
                     /db_xref="MGI:MGI:1919885"
                     /translation="MCFLELLELLVASRIHLKLHFRSQRMLFLKPHALDILAWPIPAF
                     IKRKLVILVKKCLLCKVGEDLCREPAPSLMSPDHLLDSDMLTLADTLLHAVHVGLWKA
                     LAVSGKPSCFGGDEVQPGCRLRTGPDHVTLRAASLITVKSLEIKSQNCTSAAEMKVAL
                     QTFMSELLAFLKPHLQPSLQPHNPCEWLSRVFIEQDDDMLEAAKASLSIYLQLTREWD
                     ASASLTQEKEAWIRSTHGHGCNPHCVFLFFLKNVAFDSTVLLDFLISSETCFLEYFVK
                     YLKLLQKDWAHFLSICKFFAAVESQCGMLVHDPVPSPARGRSTSLTVPHAPASPVGEN
                     TCPWLPWASDASSESQSQVMMPKETLPVPANGPPSRTPQSLVDYDSSEASEEETTSEH
                     LANSKQTSLCQERSEEIQGLPRTWEEQKEHSLEPLLSAESSSPFSAKGRVAADGTVWQ
                     VGLFLRTVKCLEELQGAIYRLQEKNLFPYNPAALLKLLKGVEAKCVNV"
ORIGIN      
        1 gcaaggcctt ccgtggagta cggtggcctg gagtaggcag ctgtgggcac gagtggccgg
       61 gcgatggctg cgtggcccgg cgggatggca gccaggcttc actgaggaaa catcttagag
      121 atccattgta tttctaagtc ttcaatattt actcctgtgg ctgttgactc tcttatgaga
      181 tacattttgg atatcaaaat ggaaatagtc caagaaattt tggatcaatt atacaggaaa
      241 gtacttcttg gaaccactct tgaagatgac gtccatggtt acatcttcta tctcaaccca
      301 gatctctcag aacaagatgg ctgtccagcc ttccctgtag ctcagtctaa tgccagtggt
      361 gtgcttgatg gcatggcagg ccagcatggg ccatcctccc acgaggtggc cacccttcct
      421 ggagcacagg agtgtcccaa gagacagctt cagatggaca gaacccggga gatgaagctc
      481 cttcagttaa cagtgattga cacgatgctg agccaggtac tgtctgatga aacggagacc
      541 cacgcaaagg aggggtacag agagctaact gaagtccttt tgcagtctgt tgaactcgat
      601 tccaaattga tgcgcatgct ccagaattct gacaagttgt tgtcccacat ggctgcgaag
      661 tgcctcgcct cgctactgta tttccagctg agagagaaga aaatgttaag taattcctgg
      721 gtcactttct gccagaagca tctctcggag tcctctgaga gtggtgaagc agtgcgttgc
      781 ctctggatcc ttacagctgt gataaaagag atccttaaag acacacattc acagagagca
      841 gcattttgga gacttccaga gcccctctaa cttagccagc agcctgatgt gctttctgga
      901 gctgcttgag cttctcgtag cctccagaat ccacctgaaa ctgcacttca ggagccagag
      961 gatgctattt ttgaaacccc atgctctaga tattcttgcc tggcctattc cagcttttat
     1021 aaaaaggaag ttggttatac tcgtcaaaaa gtgccttctc tgtaaagtgg gcgaagacct
     1081 ctgccgggaa cctgcgccct ccctgatgtc accagatcac cttctggaca gtgacatgct
     1141 cactttagct gacacacttc tgcacgctgt acatgtgggg ttgtggaagg cactggctgt
     1201 ttctggaaag ccttcctgct ttggagggga tgaagttcaa cctggatgca gactcaggac
     1261 tggtcctgat cacgtgaccc tgagagcagc aagcttaatt acagtgaagt ccttagaaat
     1321 caagtcccag aattgcacct cagcagctga gatgaaagtt gccttgcaga cgttcatgtc
     1381 cgagctactg gccttcttaa agcctcacct ccagccctct ctacagccac acaacccatg
     1441 cgagtggctg tccagggtct tcatagagca ggacgatgac atgctggagg ctgccaaagc
     1501 ctccctgagc atctacctcc agctgaccag agagtgggat gcttcggcaa gtctgaccca
     1561 agaaaaggaa gcatggatcc gctccacaca tggacatggc tgtaaccctc actgtgtttt
     1621 cttattcttc ttgaagaatg tagcattcga ttctactgtt cttctcgact tcttgatatc
     1681 ctcagagacc tgtttccttg aatattttgt taaatattta aaactgctgc agaaagactg
     1741 ggcccacttt ctgtccatct gcaagttctt tgctgcagtg gaatcacaat gtggaatgct
     1801 tgttcatgat cctgtcccct cacctgcccg tggcagaagc accagcctca cagtgcctca
     1861 tgctccggct tctccagttg gagagaacac ttgcccctgg ctcccctggg cttctgatgc
     1921 ctcctccgaa tcccagagcc aggtcatgat gcccaaggaa actctcccag tgccagctaa
     1981 tggcccacct tcccggacac cgcagagtct ggtagattat gacagctccg aagcttctga
     2041 ggaggaaacc acaagtgagc atttagcaaa cagcaaacag acatctttat gtcaagaaag
     2101 gtctgaggag atccagggcc tgcctaggac atgggaggag caaaaggaac atagcctgga
     2161 gcctttgctc tctgcagagt ccagttctcc cttctctgcc aagggtagag ttgctgcaga
     2221 cgggactgtc tggcaagtgg gattgtttct tcgtacagtg aaatgccttg aggagctaca
     2281 gggagcaatt taccgtttgc aggagaaaaa tctctttcca tataacccag cggcacttct
     2341 gaagttgttg aaaggtgtgg aggccaagtg tgttaacgtc tgagccctgg gtaacacagc
     2401 agcatctgtc ctcggctttg ttctccttga tagaaagcgt ctacctaaga taaataaaaa
     2461 caagcaagaa ctgcaaacat gcgtgtctgg gtctttgcct tatggagcat agtagtgttt
     2521 gagaaaggac catcccatga caggtcaact ggcccagctt gctacagctg agagtttatg
     2581 ctagttcaga ctacacggaa ttcgccatga caaatgactg catattctgt agcccaaact
     2641 aagtaagatt tatcttctga gctcaagagg ccagaagctt aaaatcaaga tgtgcagtgt
     2701 aatgtcctgg gacgctgcac atcttatcca tgatgcatct ccatctctgc acgctctgca
     2761 tcgtttgcta ccatggttat tttctcttct gttttgagca tagctttcca gctggagtaa
     2821 cattgtctcg ttgtagcttt gatttgccct gccctgatcg gagacatcca ctactcctcc
     2881 ttgtccaaag atccagtttc aagttgagga agaaaccctg tcttaaggca gaaaagccta
     2941 gtcaaataga agtgtggatg tcaaaacggt tagggagaca tgttggtgag gctgtgtgtt
     3001 gtcagtgtgt acttgaattt ttaaccttga tttgtcttag tcacaggcct tgcaatgttg
     3061 aggaaagctt tggactgcag ggcttggtag ccgttcctgc ttcctttctc tttgccgttg
     3121 gcttgttctc aaactcctgt gtgcagccct cttgcctcag cttccccttg gcagctcact
     3181 actgtctgta atgcctcagg ggagttgaca cctttacaca gatattcatg cagataaaac
     3241 accaatgtac tgagatagaa gtaaataaaa atgtaaaact ag
//
