LOCUS       XM_036153457            3183 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lines homolog 1 (Lins1), transcript variant
            X5, mRNA.
ACCESSION   XM_036153457
VERSION     XM_036153457.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..3183
                     /gene="Lins1"
                     /gene_synonym="2700083B01Rik; Lins; Lins2; Wins2"
                     /note="lines homolog 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 6 ESTs, 209 long
                     SRA reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 22 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:72635"
                     /db_xref="MGI:MGI:1919885"
     CDS             169..2265
                     /gene="Lins1"
                     /gene_synonym="2700083B01Rik; Lins; Lins2; Wins2"
                     /codon_start=1
                     /product="protein Lines homolog 1 isoform X4"
                     /protein_id="XP_036009350.1"
                     /db_xref="GeneID:72635"
                     /db_xref="MGI:MGI:1919885"
                     /translation="MRYILDIKMEIVQEILDQLYRKVLLGTTLEDDVHGYIFYLNPDL
                     SEQDGCPAFPVAQSNASGVLDGMAGQHGPSSHEVATLPGAQECPKRQLQMDRTREMKL
                     LQLTVIDTMLSQKMLSNSWVTFCQKHLSESSESGEAVRCLWILTAVIKEILKDTHSQR
                     AESLKQLLTPFDITFEVFYNSLFSQHFGDFQSPSNLASSLMCFLELLELLVASRIHLK
                     LHFRSQRMLFLKPHALDILAWPIPAFIKRKLVILVKKCLLCKVGEDLCREPAPSLMSP
                     DHLLDSDMLTLADTLLHAVHVGLWKALAVSGKPSCFGGDEVQPGCRLRTGPDHVTLRA
                     ASLITVKSLEIKSQNCTSAAEMKVALQTFMSELLAFLKPHLQPSLQPHNPCEWLSRVF
                     IEQDDDMLEAAKASLSIYLQLTREWDASASLTQEKEAWIRSTHGHGCNPHCVFLFFLK
                     NVAFDSTVLLDFLISSETCFLEYFVKYLKLLQKDWAHFLSICKFFAAVESQCGMLVHD
                     PVPSPARGRSTSLTVPHAPASPVGENTCPWLPWASDASSESQSQVMMPKETLPVPANG
                     PPSRTPQSLVDYDSSEASEEETTSEHLANSKQTSLCQERSEEIQGLPRTWEEQKEHSL
                     EPLLSAESSSPFSAKGRVAADGTVWQVGLFLRTVKCLEELQGAIYRLQEKNLFPYNPA
                     ALLKLLKGVEAKCVNV"
ORIGIN      
        1 atgtgggagg aacacagtgc tcttcggtag gagatgtctc ctgatgcaga tgtgctaaag
       61 aggcttctac atccttggct gtgttaccgg cttcactgag gaaacatctt agagatccat
      121 tgtatttcta agtcttcaat atttactcct gtggctgttg actctcttat gagatacatt
      181 ttggatatca aaatggaaat agtccaagaa attttggatc aattatacag gaaagtactt
      241 cttggaacca ctcttgaaga tgacgtccat ggttacatct tctatctcaa cccagatctc
      301 tcagaacaag atggctgtcc agccttccct gtagctcagt ctaatgccag tggtgtgctt
      361 gatggcatgg caggccagca tgggccatcc tcccacgagg tggccaccct tcctggagca
      421 caggagtgtc ccaagagaca gcttcagatg gacagaaccc gggagatgaa gctccttcag
      481 ttaacagtga ttgacacgat gctgagccag aaaatgttaa gtaattcctg ggtcactttc
      541 tgccagaagc atctctcgga gtcctctgag agtggtgaag cagtgcgttg cctctggatc
      601 cttacagctg tgataaaaga gatccttaaa gacacacatt cacagagagc agaaagtcta
      661 aagcagctct tgactccttt tgacattact tttgaagtgt tctacaattc cttattttcc
      721 cagcattttg gagacttcca gagcccctct aacttagcca gcagcctgat gtgctttctg
      781 gagctgcttg agcttctcgt agcctccaga atccacctga aactgcactt caggagccag
      841 aggatgctat ttttgaaacc ccatgctcta gatattcttg cctggcctat tccagctttt
      901 ataaaaagga agttggttat actcgtcaaa aagtgccttc tctgtaaagt gggcgaagac
      961 ctctgccggg aacctgcgcc ctccctgatg tcaccagatc accttctgga cagtgacatg
     1021 ctcactttag ctgacacact tctgcacgct gtacatgtgg ggttgtggaa ggcactggct
     1081 gtttctggaa agccttcctg ctttggaggg gatgaagttc aacctggatg cagactcagg
     1141 actggtcctg atcacgtgac cctgagagca gcaagcttaa ttacagtgaa gtccttagaa
     1201 atcaagtccc agaattgcac ctcagcagct gagatgaaag ttgccttgca gacgttcatg
     1261 tccgagctac tggccttctt aaagcctcac ctccagccct ctctacagcc acacaaccca
     1321 tgcgagtggc tgtccagggt cttcatagag caggacgatg acatgctgga ggctgccaaa
     1381 gcctccctga gcatctacct ccagctgacc agagagtggg atgcttcggc aagtctgacc
     1441 caagaaaagg aagcatggat ccgctccaca catggacatg gctgtaaccc tcactgtgtt
     1501 ttcttattct tcttgaagaa tgtagcattc gattctactg ttcttctcga cttcttgata
     1561 tcctcagaga cctgtttcct tgaatatttt gttaaatatt taaaactgct gcagaaagac
     1621 tgggcccact ttctgtccat ctgcaagttc tttgctgcag tggaatcaca atgtggaatg
     1681 cttgttcatg atcctgtccc ctcacctgcc cgtggcagaa gcaccagcct cacagtgcct
     1741 catgctccgg cttctccagt tggagagaac acttgcccct ggctcccctg ggcttctgat
     1801 gcctcctccg aatcccagag ccaggtcatg atgcccaagg aaactctccc agtgccagct
     1861 aatggcccac cttcccggac accgcagagt ctggtagatt atgacagctc cgaagcttct
     1921 gaggaggaaa ccacaagtga gcatttagca aacagcaaac agacatcttt atgtcaagaa
     1981 aggtctgagg agatccaggg cctgcctagg acatgggagg agcaaaagga acatagcctg
     2041 gagcctttgc tctctgcaga gtccagttct cccttctctg ccaagggtag agttgctgca
     2101 gacgggactg tctggcaagt gggattgttt cttcgtacag tgaaatgcct tgaggagcta
     2161 cagggagcaa tttaccgttt gcaggagaaa aatctctttc catataaccc agcggcactt
     2221 ctgaagttgt tgaaaggtgt ggaggccaag tgtgttaacg tctgagccct gggtaacaca
     2281 gcagcatctg tcctcggctt tgttctcctt gatagaaagc gtctacctaa gataaataaa
     2341 aacaagcaag aactgcaaac atgcgtgtct gggtctttgc cttatggagc atagtagtgt
     2401 ttgagaaagg accatcccat gacaggtcaa ctggcccagc ttgctacagc tgagagttta
     2461 tgctagttca gactacacgg aattcgccat gacaaatgac tgcatattct gtagcccaaa
     2521 ctaagtaaga tttatcttct gagctcaaga ggccagaagc ttaaaatcaa gatgtgcagt
     2581 gtaatgtcct gggacgctgc acatcttatc catgatgcat ctccatctct gcacgctctg
     2641 catcgtttgc taccatggtt attttctctt ctgttttgag catagctttc cagctggagt
     2701 aacattgtct cgttgtagct ttgatttgcc ctgccctgat cggagacatc cactactcct
     2761 ccttgtccaa agatccagtt tcaagttgag gaagaaaccc tgtcttaagg cagaaaagcc
     2821 tagtcaaata gaagtgtgga tgtcaaaacg gttagggaga catgttggtg aggctgtgtg
     2881 ttgtcagtgt gtacttgaat ttttaacctt gatttgtctt agtcacaggc cttgcaatgt
     2941 tgaggaaagc tttggactgc agggcttggt agccgttcct gcttcctttc tctttgccgt
     3001 tggcttgttc tcaaactcct gtgtgcagcc ctcttgcctc agcttcccct tggcagctca
     3061 ctactgtctg taatgcctca ggggagttga cacctttaca cagatattca tgcagataaa
     3121 acaccaatgt actgagatag aagtaaataa aaatgtaaaa ctaggattgt acgttgtaaa
     3181 aga
//
