LOCUS       XM_011249429            4846 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lin-54 DREAM MuvB core complex component
            (Lin54), transcript variant X5, mRNA.
ACCESSION   XM_011249429
VERSION     XM_011249429.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011249429.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4846
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4846
                     /gene="Lin54"
                     /note="lin-54 DREAM MuvB core complex component; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 7 ESTs, 337 long SRA reads, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
     CDS             1217..2803
                     /gene="Lin54"
                     /codon_start=1
                     /product="protein lin-54 homolog isoform X4"
                     /protein_id="XP_011247731.1"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
                     /translation="MEVVPAEIAKKPRTPTSGPVITKLIFAKPINSKAVTGQTTQASP
                     PVVTGRVLSQSTPGTPSKTITISESGVIGSTLNSTTQTPNKIAISPLKSPNKTVKSAV
                     QTITVGGMSTSQFKTIIPLATAPNVQQIQVPGSKFHYVRLVTATTASSSAQPVSQSPS
                     VNTQPLQQAKPVVVNTTPVRMSVPFVQAQAVKQVVPKPINSTSQIVTTSQPQQRLIMP
                     ATPLPQIQPNLTNLPPGTVLAPAPGTGNVGYAVLPAQYVTQLQQSSYVSIASNSNFTG
                     TSGIQTQARLPFNGIIPSESTSRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCY
                     NNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCEC
                     YEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLT
                     RPTPALNSAGGKLPFTFVTKEVAEATCNCLLAQAEQADKKGKSKAAAERMILEEFGRC
                     LMSVINSAGKAKSDPCAMHC"
ORIGIN      
        1 ttagccttgt ccacaaccct gagattcagc ttgctggttt ctgttaggtc tttaagagct
       61 tatagtatga ctgaatgata aagaataaag cttttgaact ggcaattagt aaggctttct
      121 gaagtcaaac agctaacttt tggaggatgc tggtcctatt aagccttgca gcttatatgt
      181 tcttaattcc ttacatgatt aattacttct attccctctt gggtgcttat tagactacac
      241 catgagagga actggaaggg ggtgggagat ggataggttg ttccggaatc ttgttctaaa
      301 gcaagctgtt tttttccccc ctctgcattg aacaagtgtt atcagcagca gatggttttt
      361 aatttggaaa cttagatcct aaagtcagtt ggcaaagggt tctagcgaag agctggattt
      421 tctatatgtt agaagttgat ggttatgaat gataatagag ttgaatcagt aatttaaatt
      481 tagtagtacc tgagtatctt aaaccaacga caaattgaca taatgttgtt catgggcaaa
      541 aatggtcaaa gttgagagga aaacagttca gaactttatt cttaaaaatg aaggggagag
      601 gagaccaatg tctgcatgat cagcgcctgt aatttaagga tgtccgagaa gtcaggcatg
      661 catatagaaa tagccatact gtcaacatag tcctatgagt ggagtagaat gccagcgttg
      721 gtgagtgacg ttaaagctct ccagtgactc tgaaatatac gtgaaacatg gtctaccatc
      781 tctctcaagt gtgtttctgg aaatgaaagt ttgaggtttt actgttcttg tgtcagattc
      841 cacacggctt gccttcctaa ccaacatcca ggccttggaa tcccgcaggt atcacgattc
      901 cccgtggcgt tcctgcgggt ctcccgggtg ccgagtgttt ggtattggga tgttgggtct
      961 ggcatgaccc gccggtgagc cctagaacct ctccctcccc cctgagtgcg tttgaaggtt
     1021 ggcggggcgg acgggaggtt tccccggata tgtgggtgtg cgctgctccg gagggcgggc
     1081 cggggcggga gcaggaggaa gggggaggtg actggcggcg gtggcggcgg cggctggggc
     1141 tcggctgtcg ggggaagctg ctgagctgtg atggtgatga cgagcacctg ggcatctctc
     1201 tagaagcggt gcgatcatgg aggtggtgcc ggccgagatt gctaagaagc ctcggacacc
     1261 aacctcgggt ccagtgatca cgaagctgat ttttgcaaaa ccaattaata gcaaagcagt
     1321 tacaggacag acaactcaag catctccacc cgtcgtcaca ggtagggttc tttcacagtc
     1381 tactcctgga actccatcaa agactataac aatatcagaa agtggtgtga ttggatcaac
     1441 tttaaattcg acaacacaga caccaaataa gatagccatc tcacctttga agtcgccaaa
     1501 taagacagtg aaatcggctg tgcagaccat cactgtggga ggaatgagca cctcacagtt
     1561 taagaccatc atccctctgg ccactgctcc caatgtccag cagattcaag tgcctggaag
     1621 caagtttcat tatgtccgac ttgttactgc cacaacagcc agtagctcag cccagccagt
     1681 cagtcagagc cccagtgtaa acacacagcc tctccagcaa gcaaaaccag tggttgttaa
     1741 taccacccct gtacggatgt cagttccatt tgtccaagct caggccgtta agcaagttgt
     1801 tccaaaacca atcaattcaa cttcacaaat tgtaactacc agccagccac agcagcggct
     1861 catcatgcct gccacaccac tgcctcagat ccagcccaac ctcactaacc tgccaccagg
     1921 tactgtgctg gcaccagctc caggaacagg gaatgtgggc tatgcagtgc ttccagctca
     1981 gtatgttact cagttacagc agtcttcata tgtgtctata gcaagcaact ctaattttac
     2041 tggaacatct ggcatccaga cacaggcaag gcttccattc aatggcataa ttccatcaga
     2101 gtctaccagt cggcccagaa aaccctgtaa ctgtacaaaa tcactgtgtt tgaaattata
     2161 ctgtgattgc tttgcaaatg gtgaattctg caacaactgc aactgtacca attgttacaa
     2221 caatttagag cacgagaatg agagacaaaa ggcaatcaag gcatgccttg atagaaatcc
     2281 ggaagccttc aagccaaaga taggaaaagg aaaagagggg gagtcggatc ggcggcacag
     2341 caaaggctgc aactgcaaac gctcggggtg tcttaaaaac tactgcgagt gctatgaggc
     2401 aaaaataatg tgttcttcta tatgcaaatg catcggctgt aagaattttg aagaaagccc
     2461 agaacggaag acattgatgc acttagcaga tgcggctgaa gtaagggtcc agcagcagac
     2521 agcagcgaag accaagctgt cctctcagat ctcagacctc cttacaaggc caaccccagc
     2581 tctcaacagt gcaggaggga aattgccgtt tacatttgta actaaagaag tagctgaagc
     2641 cacgtgtaat tgccttcttg cccaggcaga gcaggcagac aagaagggga aatcaaaggc
     2701 ggcagcagag cggatgatac ttgaggaatt tggacgatgt ttgatgagcg tcatcaactc
     2761 tgcaggaaaa gccaaaagtg acccctgtgc catgcactgc taactcttgc acaaaagact
     2821 gaatggaact gtacagaaaa tttaaggtgc cgggacactt gattttctag aagatagctt
     2881 aacaattact gtattttaat tcagcctttg ttttaagaga tctgaaacta taatattgaa
     2941 agagaagaaa ttagtacatt taaaatctta gttaattctg cctatgcccc ttctaaattt
     3001 ttttctttaa aaatttttct tttatgtatt atatattttt ttaatttgct tgggtttctt
     3061 aagaattaga tgttctgtcc tgattctatt gacaaagaac attcataaat tatagtgata
     3121 tcatttataa tgtatggtgt tgtatgactt tgttcagtag aaaaggccaa agtagcatgg
     3181 gtattaccca ttctttggtt acagatccag agtattcaca ggtagaatgt ccgcataacc
     3241 agattctaaa tgaaatatat ttaggagaca ttttgtttag agaaacacca tccttaaaaa
     3301 aaaaaaatca gatttttaga gtggattctg gaatgctgtc tgctgtctcg ttgggagtat
     3361 cagaagggga aacaatcccc accacacttt tcagtataat acaaacatta tgctttcttt
     3421 aaagaaagca aaatattaag gggcagtaat tttcagagga caggctgtgt ctctgatgag
     3481 gaatggctaa catggtctgg ggcgtcttca ttttctctga aggaggtggt atgttttata
     3541 ataattgtca aagtgattat ggctaattac taaaatatga gaatgaatta cattaaacat
     3601 tttgtgtcat gatgacagaa ctcatacgca gtaagtctga agtctggctc gctggagacg
     3661 cgaggactca gagctgggag gttatgtgtg gtggcgcttt atgcacacac ttctctgcag
     3721 accttctgga ctgagttcag tcagtgtgtg actcctacct ggtttactga gataaacgcg
     3781 cctcctagca gcttctagaa ctgcagccag ctttttataa aagaagtttt aatacaacat
     3841 tgtttaaaac agtgatttgg taagctgaag tatgtgtgct cttagactcg caaaaacaac
     3901 ctctatattc ttcagtaatt agaaaccgtg tgaactcggg agcctactat aataggactt
     3961 gagtttatga caagcagaaa actaggttgg aattgaaaca ttttgtaagg taccttaatc
     4021 cttggtaatt attagcatat gattattgcc cttcctacaa ggactctagc attgtaagta
     4081 gtaagtatgt atatatgttc atatgaacat gaaagatata gacaatagaa attaacccca
     4141 agaggattcc gttactcatt taagtatcct ccatttaaaa tggttttata agatgacagt
     4201 gcagtaactt taaatgtaga taatgcaggc atccttagca cctcggtcta gagtttttaa
     4261 gtaaactttg tacaaatgta aattagtcta agaggacaaa ataatatcta atcaagttat
     4321 ttttcaaaag actgcaataa gtttttggtc taaacctaaa ctttgttcat tttgtatata
     4381 ttatgtgtta attctaatag caccattgtg atgtgtattt atatacagtg tgcacaaaat
     4441 gtttgtgaat tttttattat aattgtagat tatgtatgat ggcattgctt aagattgttt
     4501 tgcttgtaag aatttgaagg tgcaatcaaa gctacgagtt tggattttta agaagccttt
     4561 aacctatcag cccctttcct tctgtgtggt tccaactgaa caactttttg tattaggcat
     4621 ttgcatcaaa ttgctgaaca aagttaatag ccacattaaa tcaccaattt caaaagatta
     4681 tttggggagg gtttggtcta taatttttaa gccctattta catcctaagg tagaaagatt
     4741 atatttacta gagctattca aaaagtacac ttttctatat tgtaaaagca gggcagaaga
     4801 ataaatcata cagaaaataa acatttatac tattctgtaa aaaaaa
//
