LOCUS       XM_011249428            3934 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus lin-54 DREAM MuvB core complex component
            (Lin54), transcript variant X4, mRNA.
ACCESSION   XM_011249428
VERSION     XM_011249428.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Nov 28, 2023 this sequence was replaced by
            NM_001425850.1.
            
            On Sep 21, 2020 this sequence version replaced XM_011249428.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3934
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3934
                     /gene="Lin54"
                     /note="lin-54 DREAM MuvB core complex component; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 7 ESTs, 339 long SRA reads, 6 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 38 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
     CDS             305..1891
                     /gene="Lin54"
                     /codon_start=1
                     /product="protein lin-54 homolog isoform X4"
                     /protein_id="XP_011247730.1"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
                     /translation="MEVVPAEIAKKPRTPTSGPVITKLIFAKPINSKAVTGQTTQASP
                     PVVTGRVLSQSTPGTPSKTITISESGVIGSTLNSTTQTPNKIAISPLKSPNKTVKSAV
                     QTITVGGMSTSQFKTIIPLATAPNVQQIQVPGSKFHYVRLVTATTASSSAQPVSQSPS
                     VNTQPLQQAKPVVVNTTPVRMSVPFVQAQAVKQVVPKPINSTSQIVTTSQPQQRLIMP
                     ATPLPQIQPNLTNLPPGTVLAPAPGTGNVGYAVLPAQYVTQLQQSSYVSIASNSNFTG
                     TSGIQTQARLPFNGIIPSESTSRPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCY
                     NNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCEC
                     YEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDLLT
                     RPTPALNSAGGKLPFTFVTKEVAEATCNCLLAQAEQADKKGKSKAAAERMILEEFGRC
                     LMSVINSAGKAKSDPCAMHC"
ORIGIN      
        1 tggtgatgac gaggtgaaaa tggcggatct ttcgaaatac aatcccggcc tctgacatac
       61 cagaggcggc ggccgcggcg acatcgccac cccggctccc tcctgggtcc ccgggtaccc
      121 tatagcgctc catttcgtgc aaactgggaa aggaagcagc tggacagagc tacggtgcac
      181 aggcaaaaca agcactgccc gggctcgaaa ttgcccggga cctctggagc ccgctcggag
      241 ccggagggtg gagaaagcgg cagcctctgg agcacctggg catctctcta gaagcggtgc
      301 gatcatggag gtggtgccgg ccgagattgc taagaagcct cggacaccaa cctcgggtcc
      361 agtgatcacg aagctgattt ttgcaaaacc aattaatagc aaagcagtta caggacagac
      421 aactcaagca tctccacccg tcgtcacagg tagggttctt tcacagtcta ctcctggaac
      481 tccatcaaag actataacaa tatcagaaag tggtgtgatt ggatcaactt taaattcgac
      541 aacacagaca ccaaataaga tagccatctc acctttgaag tcgccaaata agacagtgaa
      601 atcggctgtg cagaccatca ctgtgggagg aatgagcacc tcacagttta agaccatcat
      661 ccctctggcc actgctccca atgtccagca gattcaagtg cctggaagca agtttcatta
      721 tgtccgactt gttactgcca caacagccag tagctcagcc cagccagtca gtcagagccc
      781 cagtgtaaac acacagcctc tccagcaagc aaaaccagtg gttgttaata ccacccctgt
      841 acggatgtca gttccatttg tccaagctca ggccgttaag caagttgttc caaaaccaat
      901 caattcaact tcacaaattg taactaccag ccagccacag cagcggctca tcatgcctgc
      961 cacaccactg cctcagatcc agcccaacct cactaacctg ccaccaggta ctgtgctggc
     1021 accagctcca ggaacaggga atgtgggcta tgcagtgctt ccagctcagt atgttactca
     1081 gttacagcag tcttcatatg tgtctatagc aagcaactct aattttactg gaacatctgg
     1141 catccagaca caggcaaggc ttccattcaa tggcataatt ccatcagagt ctaccagtcg
     1201 gcccagaaaa ccctgtaact gtacaaaatc actgtgtttg aaattatact gtgattgctt
     1261 tgcaaatggt gaattctgca acaactgcaa ctgtaccaat tgttacaaca atttagagca
     1321 cgagaatgag agacaaaagg caatcaaggc atgccttgat agaaatccgg aagccttcaa
     1381 gccaaagata ggaaaaggaa aagaggggga gtcggatcgg cggcacagca aaggctgcaa
     1441 ctgcaaacgc tcggggtgtc ttaaaaacta ctgcgagtgc tatgaggcaa aaataatgtg
     1501 ttcttctata tgcaaatgca tcggctgtaa gaattttgaa gaaagcccag aacggaagac
     1561 attgatgcac ttagcagatg cggctgaagt aagggtccag cagcagacag cagcgaagac
     1621 caagctgtcc tctcagatct cagacctcct tacaaggcca accccagctc tcaacagtgc
     1681 aggagggaaa ttgccgttta catttgtaac taaagaagta gctgaagcca cgtgtaattg
     1741 ccttcttgcc caggcagagc aggcagacaa gaaggggaaa tcaaaggcgg cagcagagcg
     1801 gatgatactt gaggaatttg gacgatgttt gatgagcgtc atcaactctg caggaaaagc
     1861 caaaagtgac ccctgtgcca tgcactgcta actcttgcac aaaagactga atggaactgt
     1921 acagaaaatt taaggtgccg ggacacttga ttttctagaa gatagcttaa caattactgt
     1981 attttaattc agcctttgtt ttaagagatc tgaaactata atattgaaag agaagaaatt
     2041 agtacattta aaatcttagt taattctgcc tatgcccctt ctaaattttt ttctttaaaa
     2101 atttttcttt tatgtattat atattttttt aatttgcttg ggtttcttaa gaattagatg
     2161 ttctgtcctg attctattga caaagaacat tcataaatta tagtgatatc atttataatg
     2221 tatggtgttg tatgactttg ttcagtagaa aaggccaaag tagcatgggt attacccatt
     2281 ctttggttac agatccagag tattcacagg tagaatgtcc gcataaccag attctaaatg
     2341 aaatatattt aggagacatt ttgtttagag aaacaccatc cttaaaaaaa aaaaatcaga
     2401 tttttagagt ggattctgga atgctgtctg ctgtctcgtt gggagtatca gaaggggaaa
     2461 caatccccac cacacttttc agtataatac aaacattatg ctttctttaa agaaagcaaa
     2521 atattaaggg gcagtaattt tcagaggaca ggctgtgtct ctgatgagga atggctaaca
     2581 tggtctgggg cgtcttcatt ttctctgaag gaggtggtat gttttataat aattgtcaaa
     2641 gtgattatgg ctaattacta aaatatgaga atgaattaca ttaaacattt tgtgtcatga
     2701 tgacagaact catacgcagt aagtctgaag tctggctcgc tggagacgcg aggactcaga
     2761 gctgggaggt tatgtgtggt ggcgctttat gcacacactt ctctgcagac cttctggact
     2821 gagttcagtc agtgtgtgac tcctacctgg tttactgaga taaacgcgcc tcctagcagc
     2881 ttctagaact gcagccagct ttttataaaa gaagttttaa tacaacattg tttaaaacag
     2941 tgatttggta agctgaagta tgtgtgctct tagactcgca aaaacaacct ctatattctt
     3001 cagtaattag aaaccgtgtg aactcgggag cctactataa taggacttga gtttatgaca
     3061 agcagaaaac taggttggaa ttgaaacatt ttgtaaggta ccttaatcct tggtaattat
     3121 tagcatatga ttattgccct tcctacaagg actctagcat tgtaagtagt aagtatgtat
     3181 atatgttcat atgaacatga aagatataga caatagaaat taaccccaag aggattccgt
     3241 tactcattta agtatcctcc atttaaaatg gttttataag atgacagtgc agtaacttta
     3301 aatgtagata atgcaggcat ccttagcacc tcggtctaga gtttttaagt aaactttgta
     3361 caaatgtaaa ttagtctaag aggacaaaat aatatctaat caagttattt ttcaaaagac
     3421 tgcaataagt ttttggtcta aacctaaact ttgttcattt tgtatatatt atgtgttaat
     3481 tctaatagca ccattgtgat gtgtatttat atacagtgtg cacaaaatgt ttgtgaattt
     3541 tttattataa ttgtagatta tgtatgatgg cattgcttaa gattgttttg cttgtaagaa
     3601 tttgaaggtg caatcaaagc tacgagtttg gatttttaag aagcctttaa cctatcagcc
     3661 cctttccttc tgtgtggttc caactgaaca actttttgta ttaggcattt gcatcaaatt
     3721 gctgaacaaa gttaatagcc acattaaatc accaatttca aaagattatt tggggagggt
     3781 ttggtctata atttttaagc cctatttaca tcctaaggta gaaagattat atttactaga
     3841 gctattcaaa aagtacactt ttctatattg taaaagcagg gcagaagaat aaatcataca
     3901 gaaaataaac atttatacta ttctgtaaaa aaaa
//
