LOCUS       XM_006534883            4731 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lin-54 DREAM MuvB core complex component
            (Lin54), transcript variant X1, mRNA.
ACCESSION   XM_006534883
VERSION     XM_006534883.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006534883.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..4731
                     /gene="Lin54"
                     /note="lin-54 DREAM MuvB core complex component; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 12 ESTs, 354 long SRA reads, 7 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
     CDS             385..2688
                     /gene="Lin54"
                     /codon_start=1
                     /product="protein lin-54 homolog isoform X1"
                     /protein_id="XP_006534946.1"
                     /db_xref="GeneID:231506"
                     /db_xref="MGI:MGI:2140902"
                     /translation="MEVSFKQAPGHLSRSGAIMEVVPAEVNSLLPDDIMDTAITLVDE
                     DSIEAVIVSSPIPMETELEEIVNINSTGDSTATPISTEPITVYSNHTNQVAVNTTVSK
                     ADSNTTVKPAFPSGLQKLGAQTPVTISANQIILNKVSQTSDLKLGNQTLKPDGQKLIL
                     TTLGKSGSPIVLALPHSQLPQAQKVTAQAQPGDAKLPPQQIKVVTIGGRPEVKPVIGV
                     SALTPGSQLINTTTQPSVLQTQQLKTVQIAKKPRTPTSGPVITKLIFAKPINSKAVTG
                     QTTQASPPVVTGRVLSQSTPGTPSKTITISESGVIGSTLNSTTQTPNKIAISPLKSPN
                     KTVKSAVQTITVGGMSTSQFKTIIPLATAPNVQQIQVPGSKFHYVRLVTATTASSSAQ
                     PVSQSPSVNTQPLQQAKPVVVNTTPVRMSVPFVQAQAVKQVVPKPINSTSQIVTTSQP
                     QQRLIMPATPLPQIQPNLTNLPPGTVLAPAPGTGNVGYAVLPAQYVTQLQQSSYVSIA
                     SNSNFTGTSGIQTQARLPFNGIIPSESTSRPRKPCNCTKSLCLKLYCDCFANGEFCNN
                     CNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGC
                     LKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSS
                     QISDLLTRPTPALNSAGGKLPFTFVTKEVAEATCNCLLAQAEQADKKGKSKAAAERMI
                     LEEFGRCLMSVINSAGKAKSDPCAMHC"
ORIGIN      
        1 gggcttctgg gaacctgttt tgctgctgtg tcatttcgta ccagcgcctc ctttcgctgc
       61 tgcccggcgc cgcgttcttc ctacgcccct ttgtatggac tcttctgggt gtgtgtccgt
      121 ttccctcgcg aagcccacca gccaaatgtc atagtgtccc cgcggtgcac gggggaaggg
      181 agcgggctgg gactcagcct ggtcaagcaa cggtaaacaa ccatccgagt gccggtggac
      241 ccggctgttg gtggggaata aagttgaaag atggagaaac tgggaacccc ttccacgctc
      301 agcctctagc gggctctcgg tagaaacgcg ccgggagtgg gtgggagaca gcccttgact
      361 aagcctgagc ctgctgactt ttatatggag gtgtcattca aacaagcacc tgggcatctc
      421 tctagaagcg gtgcgatcat ggaggtggtg ccggccgagg tgaatagttt gcttccagac
      481 gacataatgg acactgctat aacgttagtg gatgaggata gtattgaggc tgtaattgtg
      541 tcatccccaa ttcccatgga gacagagctg gaagaaattg tcaacataaa ttctaccggt
      601 gactctacag ccacgcccat ttccacggaa ccaatcacag tgtacagtaa ccacactaac
      661 caagttgcag tgaataccac agtttctaaa gcagattcta ataccacagt gaaaccagca
      721 tttccaagtg gccttcaaaa acttggtgct cagactcctg tgactatatc agccaatcag
      781 attattttaa acaaagtatc acagacatct gatcttaaac ttggcaatca gacccttaaa
      841 ccagatggac agaagttaat attaacaact ttgggcaagt ctggttcacc aattgtttta
      901 gcactacccc atagccaact accccaggct cagaaagtta cagctcaggc ccagccagga
      961 gatgctaagt taccaccgca gcaaattaaa gtagttacca ttggagggag gccagaggtg
     1021 aaacctgtca ttggtgtctc agcactgacc ccaggaagcc aactgattaa tactacaact
     1081 cagccctctg tgttacagac ccaacagtta aaaacagtac agattgctaa gaagcctcgg
     1141 acaccaacct cgggtccagt gatcacgaag ctgatttttg caaaaccaat taatagcaaa
     1201 gcagttacag gacagacaac tcaagcatct ccacccgtcg tcacaggtag ggttctttca
     1261 cagtctactc ctggaactcc atcaaagact ataacaatat cagaaagtgg tgtgattgga
     1321 tcaactttaa attcgacaac acagacacca aataagatag ccatctcacc tttgaagtcg
     1381 ccaaataaga cagtgaaatc ggctgtgcag accatcactg tgggaggaat gagcacctca
     1441 cagtttaaga ccatcatccc tctggccact gctcccaatg tccagcagat tcaagtgcct
     1501 ggaagcaagt ttcattatgt ccgacttgtt actgccacaa cagccagtag ctcagcccag
     1561 ccagtcagtc agagccccag tgtaaacaca cagcctctcc agcaagcaaa accagtggtt
     1621 gttaatacca cccctgtacg gatgtcagtt ccatttgtcc aagctcaggc cgttaagcaa
     1681 gttgttccaa aaccaatcaa ttcaacttca caaattgtaa ctaccagcca gccacagcag
     1741 cggctcatca tgcctgccac accactgcct cagatccagc ccaacctcac taacctgcca
     1801 ccaggtactg tgctggcacc agctccagga acagggaatg tgggctatgc agtgcttcca
     1861 gctcagtatg ttactcagtt acagcagtct tcatatgtgt ctatagcaag caactctaat
     1921 tttactggaa catctggcat ccagacacag gcaaggcttc cattcaatgg cataattcca
     1981 tcagagtcta ccagtcggcc cagaaaaccc tgtaactgta caaaatcact gtgtttgaaa
     2041 ttatactgtg attgctttgc aaatggtgaa ttctgcaaca actgcaactg taccaattgt
     2101 tacaacaatt tagagcacga gaatgagaga caaaaggcaa tcaaggcatg ccttgataga
     2161 aatccggaag ccttcaagcc aaagatagga aaaggaaaag agggggagtc ggatcggcgg
     2221 cacagcaaag gctgcaactg caaacgctcg gggtgtctta aaaactactg cgagtgctat
     2281 gaggcaaaaa taatgtgttc ttctatatgc aaatgcatcg gctgtaagaa ttttgaagaa
     2341 agcccagaac ggaagacatt gatgcactta gcagatgcgg ctgaagtaag ggtccagcag
     2401 cagacagcag cgaagaccaa gctgtcctct cagatctcag acctccttac aaggccaacc
     2461 ccagctctca acagtgcagg agggaaattg ccgtttacat ttgtaactaa agaagtagct
     2521 gaagccacgt gtaattgcct tcttgcccag gcagagcagg cagacaagaa ggggaaatca
     2581 aaggcggcag cagagcggat gatacttgag gaatttggac gatgtttgat gagcgtcatc
     2641 aactctgcag gaaaagccaa aagtgacccc tgtgccatgc actgctaact cttgcacaaa
     2701 agactgaatg gaactgtaca gaaaatttaa ggtgccggga cacttgattt tctagaagat
     2761 agcttaacaa ttactgtatt ttaattcagc ctttgtttta agagatctga aactataata
     2821 ttgaaagaga agaaattagt acatttaaaa tcttagttaa ttctgcctat gccccttcta
     2881 aatttttttc tttaaaaatt tttcttttat gtattatata tttttttaat ttgcttgggt
     2941 ttcttaagaa ttagatgttc tgtcctgatt ctattgacaa agaacattca taaattatag
     3001 tgatatcatt tataatgtat ggtgttgtat gactttgttc agtagaaaag gccaaagtag
     3061 catgggtatt acccattctt tggttacaga tccagagtat tcacaggtag aatgtccgca
     3121 taaccagatt ctaaatgaaa tatatttagg agacattttg tttagagaaa caccatcctt
     3181 aaaaaaaaaa aatcagattt ttagagtgga ttctggaatg ctgtctgctg tctcgttggg
     3241 agtatcagaa ggggaaacaa tccccaccac acttttcagt ataatacaaa cattatgctt
     3301 tctttaaaga aagcaaaata ttaaggggca gtaattttca gaggacaggc tgtgtctctg
     3361 atgaggaatg gctaacatgg tctggggcgt cttcattttc tctgaaggag gtggtatgtt
     3421 ttataataat tgtcaaagtg attatggcta attactaaaa tatgagaatg aattacatta
     3481 aacattttgt gtcatgatga cagaactcat acgcagtaag tctgaagtct ggctcgctgg
     3541 agacgcgagg actcagagct gggaggttat gtgtggtggc gctttatgca cacacttctc
     3601 tgcagacctt ctggactgag ttcagtcagt gtgtgactcc tacctggttt actgagataa
     3661 acgcgcctcc tagcagcttc tagaactgca gccagctttt tataaaagaa gttttaatac
     3721 aacattgttt aaaacagtga tttggtaagc tgaagtatgt gtgctcttag actcgcaaaa
     3781 acaacctcta tattcttcag taattagaaa ccgtgtgaac tcgggagcct actataatag
     3841 gacttgagtt tatgacaagc agaaaactag gttggaattg aaacattttg taaggtacct
     3901 taatccttgg taattattag catatgatta ttgcccttcc tacaaggact ctagcattgt
     3961 aagtagtaag tatgtatata tgttcatatg aacatgaaag atatagacaa tagaaattaa
     4021 ccccaagagg attccgttac tcatttaagt atcctccatt taaaatggtt ttataagatg
     4081 acagtgcagt aactttaaat gtagataatg caggcatcct tagcacctcg gtctagagtt
     4141 tttaagtaaa ctttgtacaa atgtaaatta gtctaagagg acaaaataat atctaatcaa
     4201 gttatttttc aaaagactgc aataagtttt tggtctaaac ctaaactttg ttcattttgt
     4261 atatattatg tgttaattct aatagcacca ttgtgatgtg tatttatata cagtgtgcac
     4321 aaaatgtttg tgaatttttt attataattg tagattatgt atgatggcat tgcttaagat
     4381 tgttttgctt gtaagaattt gaaggtgcaa tcaaagctac gagtttggat ttttaagaag
     4441 cctttaacct atcagcccct ttccttctgt gtggttccaa ctgaacaact ttttgtatta
     4501 ggcatttgca tcaaattgct gaacaaagtt aatagccaca ttaaatcacc aatttcaaaa
     4561 gattatttgg ggagggtttg gtctataatt tttaagccct atttacatcc taaggtagaa
     4621 agattatatt tactagagct attcaaaaag tacacttttc tatattgtaa aagcagggca
     4681 gaagaataaa tcatacagaa aataaacatt tatactattc tgtaaaaaaa a
//
