LOCUS       NM_172589               4348 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus lipoma HMGIC fusion partner-like 2 (Lhfpl2), mRNA.
ACCESSION   NM_172589
VERSION     NM_172589.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4348)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4348)
  AUTHORS   Chal,J., Al Tanoury,Z., Oginuma,M., Moncuquet,P., Gobert,B.,
            Miyanari,A., Tassy,O., Guevara,G., Hubaud,A., Bera,A., Sumara,O.,
            Garnier,J.M., Kennedy,L., Knockaert,M., Gayraud-Morel,B.,
            Tajbakhsh,S. and Pourquie,O.
  TITLE     Recapitulating early development of mouse musculoskeletal
            precursors of the paraxial mesoderm in vitro
  JOURNAL   Development 145 (6) (2018)
   PUBMED   29555813
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4348)
  AUTHORS   Zhao,F., Zhou,J., Li,R., Dudley,E.A. and Ye,X.
  TITLE     Novel function of LHFPL2 in female and male distal reproductive
            tract development
  JOURNAL   Sci Rep 6, 23037 (2016)
   PUBMED   26964900
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4348)
  AUTHORS   Fairfield,H., Srivastava,A., Ananda,G., Liu,R., Kircher,M.,
            Lakshminarayana,A., Harris,B.S., Karst,S.Y., Dionne,L.A.,
            Kane,C.C., Curtain,M., Berry,M.L., Ward-Bailey,P.F., Greenstein,I.,
            Byers,C., Czechanski,A., Sharp,J., Palmer,K., Gudis,P., Martin,W.,
            Tadenev,A., Bogdanik,L., Pratt,C.H., Chang,B., Schroeder,D.G.,
            Cox,G.A., Cliften,P., Milbrandt,J., Murray,S., Burgess,R.,
            Bergstrom,D.E., Donahue,L.R., Hamamy,H., Masri,A., Santoni,F.A.,
            Makrythanasis,P., Antonarakis,S.E., Shendure,J. and Reinholdt,L.G.
  TITLE     Exome sequencing reveals pathogenic mutations in 91 strains of mice
            with Mendelian disorders
  JOURNAL   Genome Res 25 (7), 948-957 (2015)
   PUBMED   25917818
REFERENCE   5  (bases 1 to 4348)
  AUTHORS   Fairfield,H., Gilbert,G.J., Barter,M., Corrigan,R.R., Curtain,M.,
            Ding,Y., D'Ascenzo,M., Gerhardt,D.J., He,C., Huang,W., Richmond,T.,
            Rowe,L., Probst,F.J., Bergstrom,D.E., Murray,S.A., Bult,C.,
            Richardson,J., Kile,B.T., Gut,I., Hager,J., Sigurdsson,S.,
            Mauceli,E., Di Palma,F., Lindblad-Toh,K., Cunningham,M.L.,
            Cox,T.C., Justice,M.J., Spector,M.S., Lowe,S.W., Albert,T.,
            Donahue,L.R., Jeddeloh,J., Shendure,J. and Reinholdt,L.G.
  TITLE     Mutation discovery in mice by whole exome sequencing
  JOURNAL   Genome Biol 12 (9), R86 (2011)
   PUBMED   21917142
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 4348)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK087506.1.
            
            On Apr 5, 2007 this sequence version replaced NM_172589.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK087506.1, SRR1660821.148576.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4348              AK087506.1         2-4349
FEATURES             Location/Qualifiers
     source          1..4348
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 49.03 cM"
     gene            1..4348
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /note="lipoma HMGIC fusion partner-like 2"
                     /db_xref="GeneID:218454"
                     /db_xref="MGI:MGI:2145236"
     exon            1..111
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /inference="alignment:Splign:2.1.0"
     exon            112..170
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /inference="alignment:Splign:2.1.0"
     exon            171..786
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /inference="alignment:Splign:2.1.0"
     CDS             372..1040
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /note="lipoma HMGIC fusion partner-like 2 protein"
                     /codon_start=1
                     /product="LHFPL tetraspan subfamily member 2 protein"
                     /protein_id="NP_766177.1"
                     /db_xref="CCDS:CCDS26692.1"
                     /db_xref="GeneID:218454"
                     /db_xref="MGI:MGI:2145236"
                     /translation="MCHVIVTCRSMLWTLLSIVVAFAELVAFMSADWLIGKAKTRSGS
                     GDEQAGMNSEPHYLGILCIRTPAMQQVSRDTLCGTYAKSFGEIASGFWQATAIFLAVG
                     IFILCVVALVSVFTMCVQSIMRKSIFNVCGLLQGIAGLFLILGLILYPAGWGCQKAID
                     CGRYASPYKPGDCSLGWAFYTATGGTVLTFICAVFSAQAEIATSSDKVQEEIEEGKNL
                     VCLL"
     exon            787..4348
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      4348
                     /gene="Lhfpl2"
                     /gene_synonym="6030465B15; mKIAA0206; vgim"
                     /note="putative"
ORIGIN      
        1 gccggggcca gatcgaggct gcagcgagga ggcggcacag agagcccggc tggggaaggc
       61 tgcacgcgcc cgggccagag cggggcgtta ggagccggct gccccggcca ggtggtgctt
      121 ttctgaagtt gttcattgga acttctcagc attgctgcca agataaatag gtgaggctgc
      181 tggccgctgg gactcagcac tcagtctgaa tgccgacagc ccgggatcca gacctcactg
      241 cttctgctgc ctcggaccgg actgagcgac cctcgccgag acttccttcc cggacctcct
      301 cgctacttac agctgtcttt ctggattgac ccagtggact ccagcctcgc tttcccaccg
      361 tgaacatcaa tatgtgtcat gtcattgtca cctgccgctc gatgctctgg accctcctga
      421 gtatcgtggt ggcctttgct gagctcgttg ccttcatgag cgccgactgg ctgatcggga
      481 aagccaagac ccgcagcggc agtggcgatg agcaggcagg catgaactcg gagccccact
      541 acctgggcat cctctgcatc cgtacccctg ccatgcagca agtctctcgg gacacactgt
      601 gcgggaccta cgccaagagc ttcggggaga tagccagcgg cttctggcag gctaccgcta
      661 ttttcctggc cgtggggatc ttcattctct gcgtagtggc cttggtgtcc gtcttcacca
      721 tgtgcgtgca aagcatcatg aggaaaagca ttttcaacgt ctgcgggctc ctacagggaa
      781 tcgcaggtct gttccttatc ctcggcctga tcctctaccc cgcaggctgg ggctgccaga
      841 aagccataga ctgtggacgg tatgcgtccc cctacaaacc tggagactgc tccctgggct
      901 gggccttcta tactgccacc gggggcacgg tcctcacctt tatctgtgct gtcttctctg
      961 cacaagcaga aattgcaacc tccagtgaca aagtccagga agaaattgaa gaggggaaaa
     1021 acctcgtctg cctcctttaa tctggaagcc attcctgcca ccgttacctt tctttatggc
     1081 ctagtgacac agtcttcatc atttgaacca agtgaagaac cagtcgtgac ctactggagc
     1141 tatcttccac agccccggcc gggccttcct gggaccagtg aggggcatca cccaccaagc
     1201 agcgctcttg gacatgctgg ctgcagtgca gataatgaga ccagacaagg acatggaata
     1261 gcccctgggg agtcctgtcg gagactccat gtccccaggg ctcaatgaag gatagtgatg
     1321 acctgactca ccaaggcagg cggtgatctc tctggcagca gagaagaggt ttacccagcc
     1381 tcggggtagt tggaggcagg atttggtcca tagctttgtg cttatgagca tctcagaatg
     1441 gtggctggag gaggggtctt tctcttcttc ctagttctct catgttgtct tacttggaga
     1501 ctaaaaggaa aattacagac ttactgatga caggttctat gctgaaggtc acagcaaggt
     1561 aaccaagttt tgcttaactg cacaaagggc ttaacagggg cagtgcagaa ccccacagtg
     1621 gacctactcc agtttgagtg ccagggtgag aggatcagtg gagctctcct caggatttga
     1681 ataaagacag acaatcacat aagaataaaa gtacaggccc ctggcagtaa ggcagatagc
     1741 tgcctgctcc ctgcagccag cctagcgcct gtgatagccc tgtctcctct ggcggttttt
     1801 ctagggttgg cgttgtactt ggctgctcag ggaaaccagt gttctctgcc ttcaaggact
     1861 tcagcctcca gaccagctgt ggttcgtgca gatgttcaca gggaggggtg ggcagaacct
     1921 cagcgtttgc agactgaatt ttcctgtctc tgctttccag ccccattggc actgctcgca
     1981 gagaaagcag gagctaggcc tggaagcgtc tccagcttct ggtgttggtc cacagagctt
     2041 gctgacgctg gctcactgcc ctgcatcaag aatcccatcc ccaggttagc gtgaaagcag
     2101 gggctggacc aagctcactg cacctgccta cgcagggcac agaaccactt tgcctactaa
     2161 agaggactca gggcttttaa tcccgtttcc ataagttacc catttgacca aagcagccag
     2221 aaacacctga gtctggcatc ataagaacca tgcagagaca gagaccctcc ctagcggtgc
     2281 aagtggagtg gacctagttg gttctagaga gacgttcagc tgagggcttt gtcttaaata
     2341 gtgacgcacc ttctactggc aggtgtttgg tcatcaggtt tacaaccctg gttcagagtt
     2401 tacacccttg tcccagtgaa tcacttaaaa gctatgttgg tttagagcca agccttggtt
     2461 cagaacaact ccctgatata tagatgggct aggcccactg gggattaatt atagtatatt
     2521 tgccctttga ccaatatcag aaaccatcct ctctctcatg cagatgaagg ttatgaatca
     2581 gatattaagc tcagttttga gccagtattc aaaataagca agtagagacc ctgtggcttc
     2641 tttagaggag aagggggagg caccctaagc accccgaaga acactcagga cacaggaaca
     2701 gatcactaag tccatgtgcc acggagcatg tggcaaaagc gctcatcttc cctgggtact
     2761 gacgctgccc taagcaagtc ctctggcagc acagtcactg ttgccgacct gggctaagta
     2821 ctttgcacga aacacagttt tgttcattag gaagactgtg acagaaccac ttcgctttcc
     2881 ttgaatttac cagattaact tttccatctt tacaatctta gccccttctg cacagactgg
     2941 tcctaagccg cagatcctgt gcgcatgctc tttgggggtc aagggggcag tgcactccta
     3001 gcaacctggt aacagtcata aatgaagaca tgacctctct gccacactgc aatttaactg
     3061 tttctcatta atttaaatgt tggagaagac agccccacca caaagggcac aatgaaaact
     3121 gcctacatcc tgacttgatg ggacgagatt gcattttata gcagagacac ctttccaggg
     3181 aatgaacgga ccatctgcaa ttgtgctaac atagaatgga acttctctcc tggctcttca
     3241 cgaccacttg ctgggccgat acccgtttct ctgacataga accatcacta ggaccagaca
     3301 agtattctgc ctgcatctgt gctcagcttc tcattgatat acagcacaaa cacttggggg
     3361 tctgtggctt ctttaaacct gtgtgctaat tcaacgttac attataactg tggaagggtc
     3421 tttgaagtat ctgtggtgta atgaatggcc tttgtcaaac atgtattctg taaagtgcca
     3481 tagtcttttt tgttatgtgt agcatattta agtatatata ttacacatat acaagtttgt
     3541 ctaatagatg tgcaataacc aaggtgtatg tatgttttct ttggggaaac tggacaagaa
     3601 tcaaaacagg gatgtttctt ttgtggcaaa ggggagttaa aaaacatttt tgccttcatg
     3661 gctagtcata ttagtgtaac aattttagtg ctacacaaac cttatgtgaa gaaaagactg
     3721 gtatgaagta gttttctcct gggtctacgc tagaacaatc actatgttta tgggagggtc
     3781 gatccagcaa gccaggccca gtcagtgctg gtcttccgtg tgaaatgtga agctgtgtgt
     3841 cgcctcttct gtcagcctga acactagaag ctgctgcaga gtgagcagct attctttact
     3901 ctgcttttat agaccgtgtt cctgctagac cactatctct aagggctggc cttacacttt
     3961 cttagccgta agcgtctggc ttaggacaga ccattccgtg caataacatg tggcctggat
     4021 ttgtgtttcg gagagcaaag actctgaagg gatgaatggg ggcttctgag actgtgggag
     4081 acttcttcca taggcagaag ggtctttagg tgctgggaag gaacttgggc accacttgat
     4141 gtccaatagc cacttgagcc aaatataaaa aaaattatac ttattgctga tggactcatt
     4201 tggagccttc agatgtgtgg ttatcctatc atatgtaaac taatccattg tttgtctagc
     4261 attgattagc attgattctg tacttaagga ttcataacgt cctcccttcc cctcttgaga
     4321 tctgaattaa atccaatttt gcaaacgc
//
