LOCUS       NM_178358               1830 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus lipoma HMGIC fusion partner-like 1 (Lhfpl1), mRNA.
ACCESSION   NM_178358
VERSION     NM_178358.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Zhao,F., Zhou,J., Li,R., Dudley,E.A. and Ye,X.
  TITLE     Novel function of LHFPL2 in female and male distal reproductive
            tract development
  JOURNAL   Sci Rep 6, 23037 (2016)
   PUBMED   26964900
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK142526.1 and BC051434.1.
            
            On Jul 27, 2018 this sequence version replaced NM_178358.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC051434.1, AK142526.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164136
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                AK142526.1         13-57
            46-1830             BC051434.1         1-1785
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 66.54 cM"
     gene            1..1830
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /note="lipoma HMGIC fusion partner-like 1"
                     /db_xref="GeneID:237091"
                     /db_xref="MGI:MGI:1891214"
     exon            1..145
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /inference="alignment:Splign:2.1.0"
     exon            146..751
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /inference="alignment:Splign:2.1.0"
     CDS             370..1032
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /note="lipoma HMGIC fusion partner-like 1 protein; LHFPL
                     tetraspan subfamily member 1 protein"
                     /codon_start=1
                     /product="LHFPL tetraspan subfamily member 1 protein
                     precursor"
                     /protein_id="NP_848135.1"
                     /db_xref="CCDS:CCDS30458.1"
                     /db_xref="GeneID:237091"
                     /db_xref="MGI:MGI:1891214"
                     /translation="MRNSLTMVGTFWAFLSLVTAVASSTSYFLPYWLFGSQLGKPVSF
                     STFRRCNYPVRGDGHNLIMVEECGRYASFTAIPSLAWQMCTVVTGAGCALLLLVALAA
                     VLGCCMEELISRMMGRCMGAAQFVGGLLISAGCALYPLGWNSPEVMQTCGNVSNQFQL
                     GTCRLGWAYYCAGGGAAAAMLICTWLSCFAGRNPKPVMLVENIMRNTNSYALELDHCL
                     KP"
     exon            752..850
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /inference="alignment:Splign:2.1.0"
     exon            851..1819
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1789..1794
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /note="hexamer: AATAAA"
     polyA_site      1819
                     /gene="Lhfpl1"
                     /gene_synonym="Lhfp"
                     /note="major polyA site"
ORIGIN      
        1 aaggttttca ggcatcactg caaagagcaa ctgggaatcc catccctgtc tgacaagctg
       61 tgagaagttc ttattttctc tctctctctt ctcaaatctg aaccaggcga aagggaacaa
      121 gtcaatcagc cttcgtggtt agaagcctag caacttagaa ggaaaggatg gtgaaaagca
      181 atatctcaca aagacccaaa tgacatttga gagaacgatc tcctcaagaa caagatccat
      241 acagcatacc tgtgagtccc aggacctggc aacctgatga aaacagtcca gtgaagccta
      301 catcataact tgatttttgc tgctgtgaac catctcatct ccccatcctt gcacagaaac
      361 cccgagacca tgaggaacag ccttactatg gtaggcacct tctgggcctt cctgtcccta
      421 gttaccgctg tggccagttc taccagttac ttccttcctt actggctgtt tggatcacag
      481 cttggaaagc cagtatcttt cagcacattc aggagatgca actaccctgt gcggggagat
      541 gggcacaatc tgatcatggt ggaagaatgt gggcgctatg ccagcttcac cgccatacca
      601 agcctggcct ggcagatgtg cacggtggtg acaggtgctg gctgtgctct gttgcttctg
      661 gtggcattgg ctgctgtcct aggatgctgc atggaagagc tcatctctag aatgatgggg
      721 cgttgcatgg gagctgcaca gtttgtagga gggctgctga taagcgcagg ctgtgcatta
      781 tatcctttag gatggaacag cccggaggta atgcaaacat gcgggaatgt ctccaatcaa
      841 tttcagttag gaacctgtag actcggctgg gcctattact gtgctggggg tggagctgct
      901 gcagccatgt tgatctgcac ctggctctct tgctttgctg gaagaaaccc caagccagtt
      961 atgttggtgg agaacatcat gagaaatacc aattcttatg ccttggagct tgatcactgc
     1021 ctcaaacctt aagttttgaa agatttacta aagagggaaa agaaacctga acagatgtat
     1081 taagtaagcc aagatagcca cctactagtc gaatacccta atgcttgcat gctccttaaa
     1141 catgtgtcac tcatttccat gttcccccaa aactccaagt ccatggctct ttagataatt
     1201 tttcagcaca atgattcaaa cattcacggg aatgaagttt ctactggtca cccaagtcac
     1261 actgagtacc tttatgcaaa gtaagattct tacttgaaaa gttaccaaat aaccaagaaa
     1321 cttctcagag ttctataaca tgtacttccc acttacttta aagcatagat tctgttcagg
     1381 agcagtagta ctcaaggggc actggaagac acactaagct attttgcacc cattcatttg
     1441 catggctctc cccctaatat ttattgttcc tcacaagcac atcacaagaa ttactatttg
     1501 aaacatttgt gaatttctca agcctatact tcatttccat ttcgtttttt tttcttttct
     1561 tatgcacgag aaagcatggt agaaaggtaa ctttcagtgg ggaaaacact aatcatgttc
     1621 acgtgcatct aatatggggc agctttcaca ttatgcttta gaatattcat aggagttaat
     1681 tttctactct tgctgggtga ctggtatcaa aatatagtgg caagtgttcc ttaaactatt
     1741 ctagctagag gaatgttgtt cattgagtct aacatttgtc aggtgttcaa taaacatgaa
     1801 ctcccagtga tgagggcaaa aaaaaaaaaa
//
