LOCUS       NM_173752               3635 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus galectin like (Lgalsl), mRNA.
ACCESSION   NM_173752
VERSION     NM_173752.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3635)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3635)
  AUTHORS   Alvarez-Dominguez,J.R., Zhang,X. and Hu,W.
  TITLE     Widespread and dynamic translational control of red blood cell
            development
  JOURNAL   Blood 129 (5), 619-629 (2017)
   PUBMED   27899360
REFERENCE   3  (bases 1 to 3635)
  AUTHORS   Naba,A., Clauser,K.R., Mani,D.R., Carr,S.A. and Hynes,R.O.
  TITLE     Quantitative proteomic profiling of the extracellular matrix of
            pancreatic islets during the angiogenic switch and insulinoma
            progression
  JOURNAL   Sci Rep 7, 40495 (2017)
   PUBMED   28071719
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3635)
  AUTHORS   Alvarez-Dominguez,J.R., Hu,W., Yuan,B., Shi,J., Park,S.S.,
            Gromatzky,A.A., van Oudenaarden,A. and Lodish,H.F.
  TITLE     Global discovery of erythroid long noncoding RNAs reveals novel
            regulators of red cell maturation
  JOURNAL   Blood 123 (4), 570-581 (2014)
   PUBMED   24200680
REFERENCE   5  (bases 1 to 3635)
  AUTHORS   Harrow,J.L., Steward,C.A., Frankish,A., Gilbert,J.G.,
            Gonzalez,J.M., Loveland,J.E., Mudge,J., Sheppard,D., Thomas,M.,
            Trevanion,S. and Wilming,L.G.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
REFERENCE   6  (bases 1 to 3635)
  AUTHORS   Sansom,S.N., Griffiths,D.S., Faedo,A., Kleinjan,D.J., Ruan,Y.,
            Smith,J., van Heyningen,V., Rubenstein,J.L. and Livesey,F.J.
  TITLE     The level of the transcription factor Pax6 is essential for
            controlling the balance between neural stem cell self-renewal and
            neurogenesis
  JOURNAL   PLoS Genet 5 (6), e1000511 (2009)
   PUBMED   19521500
REFERENCE   7  (bases 1 to 3635)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   8  (bases 1 to 3635)
  AUTHORS   Fuchs,S., Resch,K., Thiel,C., Ulbrich,M., Platzer,M., Jockusch,H.
            and Schmitt-John,T.
  TITLE     Comparative transcription map of the wobbler critical region on
            mouse chromosome 11 and the homologous region on human chromosome
            2p13-14
  JOURNAL   BMC Genet 3, 14 (2002)
   PUBMED   12174196
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BE979710.1, AK041053.1 and AK081513.1.
            
            On Oct 23, 2007 this sequence version replaced NM_173752.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AW060926.1, AK156350.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                BE979710.1         1-86
            87-3408             AK041053.1         2-3323
            3409-3635           AK081513.1         3094-3320
FEATURES             Location/Qualifiers
     source          1..3635
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 13.53 cM"
     gene            1..3635
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /note="galectin like"
                     /db_xref="GeneID:216551"
                     /db_xref="MGI:MGI:1916114"
     exon            1..135
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..618
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /note="galectin-related protein A; lectin, galactoside
                     binding-like; lectin galactoside-binding-like protein A"
                     /codon_start=1
                     /product="galectin-related protein"
                     /protein_id="NP_776113.1"
                     /db_xref="CCDS:CCDS24461.1"
                     /db_xref="GeneID:216551"
                     /db_xref="MGI:MGI:1916114"
                     /translation="MAGSVADSDAVVKLDDGHLNNSLGSPVQADVYFPRLIVPFCGHI
                     KGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCI
                     SGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTI
                     KINGDLQITKLG"
     exon            136..207
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /inference="alignment:Splign:2.1.0"
     exon            208..296
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /inference="alignment:Splign:2.1.0"
     exon            297..474
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /inference="alignment:Splign:2.1.0"
     exon            475..3635
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3393..3398
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /note="hexamer: AATAAA"
     polyA_site      3416
                     /gene="Lgalsl"
                     /gene_synonym="1110067D22Rik; A530071M23; Grpa; Hspc159;
                     Lgalsla"
                     /note="major polyA site"
ORIGIN      
        1 cggccgcgcc agcctggggc gtgcacgcgc gcccgtgtgt gcgcgcgccc ggctcggacc
       61 cgcgcccgcc gccgcgtccc cggcgctcgc tgcaggaaca tggcggggtc ggtggccgac
      121 agcgacgccg tggtgaaact tgatgatggg cacttaaaca actccttggg ttctccagtt
      181 caagccgacg tgtacttccc acgactgata gttccatttt gtgggcacat taaaggtggc
      241 atgagaccag gcaagaaggt attagtgatg ggcatcgtag atctcaaccc cgaaagcttt
      301 gccatcagct tgacctgtgg agactctgaa gatcctcctg ccgatgtggc aattgaactc
      361 aaagctgtgt tcacagaccg gcagctgctc agaaactctt gtatctcagg agaaagaggc
      421 gaggagcagt cggcaatccc ttactttcca ttcatcccag accagccgtt cagggtggag
      481 attctttgcg agcacccacg tttcagagtg tttgtggatg gacaccaact ttttgatttt
      541 tatcaccgta ttcaaacatt atctgcaatt gacaccataa agatcaatgg ggacctccag
      601 atcaccaaac ttggctgatg tttaaagcac ttctatttca aatatgatcg atcaggtgcc
      661 acaactacat gtctgaaaga agtgtcctaa ccagatctgg agacttaaaa agaaaacaaa
      721 aacaaagaca gacttcactg tctctttctg tgcagtttaa gtccagagtg acaacctcat
      781 ctgtggtttg cccagaagaa gaaaactcgc aagaaagaca ctgagccatt atacccagaa
      841 caaagtaata catttatctg gtttttattc agactaaact aaaatggatt tgtgatgatt
      901 tgtgatttga tagcaattac tcatcatttc aaagcaaggt gatatttaga aacaaaagtg
      961 ctaaagacct taaaaacaac agcggtacat caaatctgca ctgacgtgga attgcgtagc
     1021 acaaccgaca ttttagtcag ggtatttaca tagaatgtag attgtgcaag gtttggttct
     1081 tatgttttct tgggttttgt tttgttttgt ttttggcaca gcatcatgtt aacttggatt
     1141 tttaagcatt ctcgattaat ttatttatat ttagtatatg tattaatgta tcagagaatg
     1201 agcaatgtct acaaattatg aacttaggtc taagggggaa atttatgtat aacaagcata
     1261 aaataagtga atttttacct taaagaattt gaacatattc cccttacccc tcaactttgg
     1321 cttcttgaca taaattgcta taagtgcttt tggggacatt tttgcaacac ttcgataaag
     1381 ctctaaagtt cttgtcgatg atgggaactt ttgtttgcat tgctttttct ccttcctgtg
     1441 aattagcaca gtattggctt ccttaaggct aactattcct tagatttaca taatagctca
     1501 ttaagttgtt attaaattaa tggaaagcat ataagaggtg attgcataga cagcttttta
     1561 aataactata tatcagtttt taatagtatg ctatgaaaat ggttccagaa tgcagtgtta
     1621 agcagaagca agttgcccca aattacttac tgagaagtaa tttatatcaa cctaggctgt
     1681 tagctcattg tatactttgt cttctgagac cctgcccagt atccctaagc aatgcctttg
     1741 gagcttctga gtagacagtg ctgcctccct ggtggatacg gtgggatcca gctaggtcat
     1801 ctgaaagatt aagtcccagg atctcagcca acagtgacca tgcttccagg gaaactgctt
     1861 cctgcacttg cagaaccacc agtaggctgc aggtgactaa cgtatctgca aggttagaga
     1921 tgctcggtgt ttcataccct gcgttggtcc tagagagaag ggcctttggc attgctttgg
     1981 gcaggtagtg ggagaagaaa gggatcctgg gtggggtgta tttatatata atttcggttt
     2041 tgtttgtaca gtgtatgtgt cttattaggg cacctctttg tccttcgctt ctaaggtttt
     2101 ttacacaaca tgcagaggca ctgaagtgac catgtcatct tcatgtgtca agaatgtaga
     2161 cagtgtttca gaaccaaagt ctaagataaa caaagcaaac tcaaataagg aatctttata
     2221 gatgatatat ttggattctt ctcaactttg aaactgttta gcacagttcc atggtgttat
     2281 attcaaagcc ttgtccacca agacctgctg cgtcttaaaa aactttctgt tctcatggct
     2341 tctcaggcag ccaggagagc tgttttgtag ctccaggttt ttattttgtt ttttgttttt
     2401 tttaaagcct gtgagcaatt tctcatgggt tgaaaagcca ctttagagga gtgtctgtca
     2461 agagacttag aacacaccct gaaaaacatt tatgagattt ggattcgatt catgcagtaa
     2521 gcaccccccc ccaccccccc gagggatctt ctgagtgggc aagcatgtgt aactcagcag
     2581 aagcttgggg tacgggagta taaaagattg gaagtggctt ttctctacct gtcagctaac
     2641 tcagaagcag ccaatcccgt aggctgcttg gtaatgaaaa gcagtattaa atcccagatc
     2701 agcctcctgg gagccgtcta agtggtgcat tgagttgatt ttggactagt taatcaatag
     2761 gggccacagc ccaactcact gtccaaatgg ctagctagaa actaggacaa gttcacagtc
     2821 tcctcagcct gagaggtcaa atgtggggaa ttcaggatgg aaagtgcaat ttcaagcttc
     2881 atggggaaag cactgcatac acaggagttc tgtccaccca gggccctagt cttgcaataa
     2941 ccaaaaccaa gggataacaa tcaggctctg gggcaataag caggctttag acaatctgca
     3001 gcaaaggtgg aggaaatgtg tctatctacc atgttaacag atgacttcta cttcctgggc
     3061 aatcccagaa ttgtcttaaa atgattattt ttttaaattt tgaagcccag tttcaaatct
     3121 tgccaacttc tctacaactc cctaagagat cactcttaga gttgatgacg cattaaatgg
     3181 caaatccatg tgcattaaga gaaaaatatc caaaaaagga tcaagcccta ctgccttgag
     3241 aaaacagctt tggcattttc cagcattaat gtaaagataa tgttcctatg atgacatatt
     3301 ttcaaagaaa cactttctta tttactgcgt ggtgtaaact gttgttaaat gtgttgttac
     3361 attatgtcac tgctaaaagt tatttgcact ataataaagg aattttctac aagatagctt
     3421 ctgggttatt acatgctgca tttggctcta gatacaatgt atttatcata gaccatgtgc
     3481 ttaatagtgg tccctttatc tcacatacta taagaccatg tgtacgtgtg cttcccatat
     3541 tgataaaggc tagaaaaatg tctcagaggc tccagagacc caatgagctt atgttgtgga
     3601 tgcctaagtt ctgttttaat aaaatataaa ctatg
//
