LOCUS       XM_006521320            2735 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus LETM1 domain containing 1 (Letmd1),
            transcript variant X1, mRNA.
ACCESSION   XM_006521320
VERSION     XM_006521320.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006521320.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2735
                     /gene="Letmd1"
                     /gene_synonym="1110019O13Rik; HCCR-2; HCCR1; MCC-32; Mccr"
                     /note="LETM1 domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 19 ESTs, 746 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 49 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:68614"
                     /db_xref="MGI:MGI:1915864"
     CDS             341..1417
                     /gene="Letmd1"
                     /gene_synonym="1110019O13Rik; HCCR-2; HCCR1; MCC-32; Mccr"
                     /codon_start=1
                     /product="LETM1 domain-containing protein 1 isoform X1"
                     /protein_id="XP_006521383.1"
                     /db_xref="GeneID:68614"
                     /db_xref="MGI:MGI:1915864"
                     /translation="MALSRVCWARAALWGSTVAPGPFVTRRLQLGRSGPAWRAPRSSK
                     LHLSPKADVKNLISYVVTKTRAINGSYHRFLGRHFPRFYALYTTFMKGIQMLWADGKK
                     ARRIKADMWKQNLKFHQLSYREMEHLRQFRRDITKCLFVGLISIPPFANYLVFLLMYL
                     FPRQLLVKHFWTPKQQIDFLDVYHGLRRRSHSEVITHLRRASTFVSHEKLRRQLTDLC
                     TKSGTHPAAQDVLALRDCFSTYPLGFSQLQASQMRALSQAMLLTPYLPPPLLRQRLKS
                     HTTVIHQLDRALAKLGIGQLTAQEVKSACYLRGLNSTHIADDRCRAWLGEWLHISCSL
                     KEPELSLLLHNVVLLSTNYLETRR"
ORIGIN      
        1 ggggccacga ccccgggctc ccacagaggt caagggcagc gcccgcggcc ccgagccccc
       61 agggaccgac gagggcactg ggttcctcaa ggagacgccg tcctcggctc acgatagcga
      121 cctcaggctg ggccggcgct cgctccctcg gggaggctcg cttccggtcc tgcgcgcgga
      181 agcgtcgccg cgtccaatcc gggtccccgc ccgggctcgc ccggggggcg cggggcggct
      241 cgcagccgcc tgtcggcgtg gaggggcggc gcgtgcgtgc tgcggggcgc actctgaccc
      301 ggagacgacc tctctccgcg ctccctcccc tgctgtgaag atggcgctgt ccagggtgtg
      361 ctgggctcgg gctgctctgt ggggttcgac tgtcgcccct ggaccctttg tcacccggag
      421 gctgcagctg ggccgctctg gccctgcgtg gcgagcccct cggtcttcaa agcttcacct
      481 ttctccgaag gcggacgtga agaacttgat ttcttacgtg gtgaccaaga caagagcgat
      541 taacggatcg taccatcgtt tcttggggcg tcatttcccc cgcttctatg ccttatacac
      601 aaccttcatg aaaggaatac agatgttatg ggctgatggc aaaaaggcta gaagaataaa
      661 ggcagacatg tggaaacaaa acctaaagtt tcatcaactc tcttaccggg agatggagca
      721 tttgagacag ttccgacgag atatcaccaa gtgtctcttc gttggcctca tctccattcc
      781 accctttgcc aactacctgg tctttttgct aatgtacctg tttcctaggc aactgctagt
      841 caagcatttc tggaccccca aacaacaaat tgatttcttg gacgtttatc atggtctccg
      901 gaggcggtcc cactcggaag tcatcacaca tctaagaagg gccagcactt ttgtttctca
      961 tgagaaactc cggaggcagc tgacagacct gtgcaccaag agtggcaccc acccagcagc
     1021 acaggacgtc ctggctctca gagattgctt ctctacctac cccttgggct tcagccagct
     1081 ccaagcctcg cagatgagag ccttgagcca ggccatgctc ctcacacctt acctgccccc
     1141 gcccttgctg aggcagcggc taaagagtca caccaccgtg atccaccagc tggacagggc
     1201 tctggcaaag ctggggattg gccagctgac tgcacaggaa gtgaaatcgg cttgctatct
     1261 tcgtggcttg aactctaccc acattgctga cgacaggtgt cgagcctggc tgggggaatg
     1321 gttgcacatc tcctgtagcc tgaaagaacc cgagctgtcc ctcttgctgc acaacgtggt
     1381 cctgctctcc accaactacc ttgagacaag gcgctgagtg aaccccacgg aaaggacggc
     1441 attgtcctgc agtcacctag tgtagtggtg tgggaccaag aagcacctgt cagctgtctg
     1501 tgcgcaccac tagtgtggga ggcagcggag tgggttccac gggcttcaga gcacgctacc
     1561 cccctgggag ctatagacat tccttcacag cttgagccta acaaacccat gtgtgctaac
     1621 ctggaactgg caagcatctc tggtactgaa cttttattgt gatgtaatac ttaggtccta
     1681 taaagtcagc ctttgcccag gtgggaatca tgtggcctaa aattgagcac tgccatggtt
     1741 ttgtttttaa ggtgtttttt gtgtgttcct ttttgagatg agtctctgtt gcccaggctg
     1801 gcctccaatc cctgtgctca agggatcctc tctctccaga ctcgggtgct gcggctgcac
     1861 tggcctcact gccacgttct ctacagccga gccttgtttt cctgagaccc cgtgtctcat
     1921 gtagccgaag aggaccttga gatctggtct tcctaccccc agctcccagg cgctggaaca
     1981 ccggcaagga gcccacgaag ctctggggtg ttgtcttggc tgagtgcttt ttaccgagtc
     2041 tttgtgcact agcggatctc tggtaccaag aacagtgcag cttactctgg ggtgagggca
     2101 cccatgcctg gccctgcgcc aacaccccgg cagtggtttt tcttatgccc cctccctttt
     2161 ccttttatgg cctttttgag agtcttactg tataacctgg caatcctgac agacaattct
     2221 gccacagcct cctggagcga gaatataagc atgagccaca cccatccttt ctggtgagac
     2281 caaaagtagg gctgtttctc ctcgtcacta tcatgggcta acttccaccc ctcctctcag
     2341 tattctatgg acactttttt ttttttaata gtaatttatg ggaacattct aaaggaggcg
     2401 gtgagaaaga atggctgcct ggcccctccc tgcgtttgtc cccagtgtct tactttccag
     2461 gctgtcacac agcccctagg gaccttacat gtttgctacc tccactgtgt tgcactaagc
     2521 catctgtaac cagcagtggc tgccttctct aggctgtggg tcaaaaacgc acaaggtact
     2581 aattactgcc cagccctggg agaccaggag atttgcaata gatagtgagt tgggcttaac
     2641 tgtcgtgtgt acatctatgc cctgtcgttt tgtaataact tactgtaaat gcatgaagca
     2701 ctggtttaag cctaagtaaa gactgcctga aacca
//
