LOCUS       NM_001374609            3671 bp    mRNA    linear   ROD 09-JUN-2024
DEFINITION  Mus musculus leukocyte receptor cluster (LRC) member 8 (Leng8),
            transcript variant 1, mRNA.
ACCESSION   NM_001374609 XM_030242412
VERSION     NM_001374609.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3671)
  AUTHORS   Sansom,S.N., Griffiths,D.S., Faedo,A., Kleinjan,D.J., Ruan,Y.,
            Smith,J., van Heyningen,V., Rubenstein,J.L. and Livesey,F.J.
  TITLE     The level of the transcription factor Pax6 is essential for
            controlling the balance between neural stem cell self-renewal and
            neurogenesis
  JOURNAL   PLoS Genet 5 (6), e1000511 (2009)
   PUBMED   19521500
REFERENCE   2  (bases 1 to 3671)
  AUTHORS   Jensen,P., Magdaleno,S., Lehman,K.M., Rice,D.S., Lavallie,E.R.,
            Collins-Racie,L., McCoy,J.M. and Curran,T.
  TITLE     A neurogenomics approach to gene expression analysis in the
            developing brain
  JOURNAL   Brain Res Mol Brain Res 132 (2), 116-127 (2004)
   PUBMED   15582152
REFERENCE   3  (bases 1 to 3671)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC110496.12 and AC101941.11.
            
            On Oct 8, 2019 this sequence version replaced XM_030242412.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.62158.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-140               AC110496.12        169075-169214
            141-233             AC110496.12        170291-170383
            234-405             AC101941.11        133917-134088       c
            406-513             AC101941.11        133464-133571       c
            514-624             AC101941.11        132374-132484       c
            625-877             AC101941.11        131223-131475       c
            878-1019            AC101941.11        130869-131010       c
            1020-1223           AC101941.11        130470-130673       c
            1224-1502           AC101941.11        129810-130088       c
            1503-1643           AC101941.11        129579-129719       c
            1644-1929           AC101941.11        129169-129454       c
            1930-2031           AC101941.11        128694-128795       c
            2032-2100           AC101941.11        128544-128612       c
            2101-2230           AC101941.11        128323-128452       c
            2231-2438           AC101941.11        128034-128241       c
            2439-3671           AC101941.11        125334-126566       c
FEATURES             Location/Qualifiers
     source          1..3671
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.39 cM"
     gene            1..3671
                     /gene="Leng8"
                     /note="leukocyte receptor cluster (LRC) member 8"
                     /db_xref="GeneID:232798"
                     /db_xref="MGI:MGI:2142195"
     exon            1..140
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            141..233
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            234..405
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            406..513
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            514..624
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            625..877
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            878..1019
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..1223
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            1224..1502
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            1503..1643
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            1644..1929
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            1930..2031
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            2032..2100
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            2101..2230
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            2231..2438
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     exon            2439..3671
                     /gene="Leng8"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3651..3656
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Leng8"
                     /note="hexamer: ATTAAA"
     polyA_site      3671
                     /gene="Leng8"
                     /note="major polyA site"
ORIGIN      
        1 agagaggcca ccctcgcagc gtggtgcgca agcgcggccc ggccggtggc tggtcgcggg
       61 ggacaaggga ggtcgcttgt gttcagggcg gcctcaacct ccacctagcg tcgtggactc
      121 catgcctgcg ggacagccag acatttaaaa agcagcctgg ctcccgaggt ctattcccta
      181 caccccaagg tccagatggc ggccaacgtg ggtgatcagc gtgctgcaga ctggtcttct
      241 cagtacagca tggtgactgg gaacagcaga gaaaatggca tggagactcc tatgcacgag
      301 aacccagagt gggagaaggc ccgccaggcc ctggccagca tcagcaaagc aggggctacc
      361 agcagttcca aagccagcag cagtggtcct gtggccagtg cacaatacgt ctctcaggca
      421 gaagcctctg ctttgcagca gcagcagcaa caatactacc agtggtacca gcagtacaac
      481 tatgcctatc cgtatagcta ctactacccc atgagcatgt accagagcta tggctccccc
      541 tcccagtatg ggatggccag ctcctacggc tcagctacag cccagcagcc atcggctccc
      601 cagcaccaag ggactctgaa ccagcctcca gtccctggca tggatgagag tatggcctac
      661 caggcttccc ctcagcagct acctgcagct cagccccctc agccctcaaa ctcacaacat
      721 gggacacata gtctaagcaa cggccctcag cctgggacag ccccaagcac tcagcacagt
      781 caggccgggg ctcctacagg gcaggcatat gggccacaca gctacagcga gcctgccaaa
      841 cctaagaagg gtcagcagtt atggacccgc atgaaaccag cccctgggac tgggggtcta
      901 aaatttaaca tccagaagcg gccctttgct gtcaccagcc agagcttcag ctccaattca
      961 gagggccaac acagcagctt tgggccccag cccaactcgg agaacactca gaaccgcagt
     1021 ggaccttctg gccggggaaa cctgtctggg aagccagatg attggcctca ggatatgaag
     1081 gaatatgtgg aacggtgttt caccgcctgc gagtcagaag aggacaagga ccggacagag
     1141 aaactgctca aggaggtgct acaggcccgg ctccaggatg gctctgccta caccatcgac
     1201 tggagccgag agcctctgcc tgggctgacc agggagcctg tggctgagag ccccaagaag
     1261 aagcggtggg aggcccctag cagccttcac ccttccaggg gggcaggctc ggtgaccagg
     1321 ggcgggggtg cccaatccca gcgagggaca cctggggctg ggggtgctgg ccgagctcgg
     1381 ggtagcagct tcaccaagtt cggcaaccgc aacgtcttca tgaaggataa cagctcttcc
     1441 tccagcacgg attcacgctc ccgctcctca tccaggtctc ccacgagaca ctttcggaga
     1501 agtgactccc attcagactc tgacagctcc tactcaggga atgagtgcca ccctgtaggc
     1561 cgcaggaacc caccccccaa gggtcggggt ggtcgagggg cccacatgga tcgaggtcgg
     1621 ggcagggcgc agcgtggaaa gagacatgac ctagctccca ccaaacgtag ccgcaagaag
     1681 atggcagcac tggagtgcga ggacccagag cgtgagctta agaagcaaaa gagggcagcc
     1741 cgcttccaac atgggcactc acgtcgcctg cgccttgaac ctttggtgct acagatgagt
     1801 aacctggaga gcagtggagc tgaccctgac tggcaggagc tgcagattgt gggcacctgt
     1861 cctgacatta caaagcacta tctgcggctc acctgcgccc cagacccgtc aactgtgcga
     1921 cctgtggctg ttttgaagaa gtctctgtgc atggtcaagt cccactggaa ggagaagcag
     1981 gactatgcct ttgcctgtga gcagatgaag tccattcggc aggacctgac agtgcaaggc
     2041 atccggacgg agttcactgt ggaggtgtat gagacccatg cccgcattgc cttggagaag
     2101 ggtgaccatg aagaattcaa ccagtgccaa acacagctta agtcactgta cgcggaaaac
     2161 ttagcaggca atgtgggtga atttactgca taccgaatcc tctactacat cttcaccaag
     2221 aactctggag acatcactac ggaactggca tacctcacaa gggagatgaa ggcagacccc
     2281 tgcgtggccc acgcgttggc actgagggca gcctgggccc tgggcaacta ccaccgcttc
     2341 ttcaggctct attgccatgc accttgcatg tctggctacc ttgtggacaa gtttgcagac
     2401 cgggagcgca aggccgccct caaggccatg atcaaaacct tccgccctgc gctgcccgtc
     2461 tcctacctgc aggccgagtt ggccttcgag ggcgaggccg cctgccgggc cttcctagag
     2521 cccttgggcc tgtcctacac gggcccggac aactccagcg tggactgccg cctcagcctg
     2581 gcgcagctgc cagccttcta agcacccatc gagcacgggc gggagcaggg ctgtggccca
     2641 gcgccgcctt ttcacatttt ttgagccatg gacatgggtt gtaaaaattt gtggggagta
     2701 ggctccagga agagccagca tccctgcccc cgtttcccac cggggacctg tacagagatt
     2761 tttttctaca tttttatttt ttgtctcaga ggggataatt gggagtgtat agtggagcag
     2821 ggtggggcgg ggctacaggt tctgtgtgca cctgtcacct ccactaacgc tgtctcagtg
     2881 ttttctctct ctctctcgag ctcgtagtcc agcgcctgac tctgcgtcgg cccatcccac
     2941 gctggggcca gcagaaagaa gacaggctgt ccaggccgca cccgctgcag tggggcacca
     3001 gccggccaca cccattgcct cggctgcctc ttcatagact cttgctgccc agccgttggg
     3061 gcctcagtgt ttggggtgag ggaagccact taaagactat gccccacctt cagctcctca
     3121 ccccagaaac tccagccagc accaccgaca caaccagacc agcgccacac cgcactgagg
     3181 actccaaggc cttcgcggga ccatgccggc cgggctgcct cgtcttactc aagttgtatt
     3241 aagttgtctc cgtgtccctt cctccctctg ccccaatgtt tcttctgatt tttttttttt
     3301 ctttccctcc tgcctcttcc cttcccactc cctggttcaa cacaggtaaa atggttaccc
     3361 tcccttcttt cctcccctct gccttcatgg atcaccaact cacgtcatgt ttccttctct
     3421 tttctctgtg tgtgtgttta tttaagttac ttttcttcct tctccccttt tctttttacc
     3481 cctccccctt ctgccatgta actggaggat gtgctatgag gttgcaaaca gctggactgt
     3541 caggctgctt tttcccagat gcctccctgc ctccctccct ccctctcccc tcccttcctt
     3601 cattctcctt gagcattgag tacagtacat tttggaagct tgaaaccaaa attaaagaga
     3661 gagagcgaga a
//
