LOCUS       XM_036162911            2096 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lymphoid enhancer binding factor 1 (Lef1),
            transcript variant X4, mRNA.
ACCESSION   XM_036162911
VERSION     XM_036162911.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2096
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..2096
                     /gene="Lef1"
                     /gene_synonym="3000002B05; Lef-1"
                     /note="lymphoid enhancer binding factor 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 27 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:16842"
                     /db_xref="MGI:MGI:96770"
     CDS             238..933
                     /gene="Lef1"
                     /gene_synonym="3000002B05; Lef-1"
                     /codon_start=1
                     /product="lymphoid enhancer-binding factor 1 isoform X4"
                     /protein_id="XP_036018804.1"
                     /db_xref="GeneID:16842"
                     /db_xref="MGI:MGI:96770"
                     /translation="MSRHPPAPEIPTFYPLSPGGVGQITPPIGWQGQPVYPITGGFRQ
                     PYPSSLSGDTSMSRFSHHMIPGPPGPHTTGIPHPAIVTPQVKQEHPHTDSDLMHVKPQ
                     HEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSRE
                     EQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKLQESTSGGKRSSFPTCKAK
                     AATPGPLLEMEAC"
ORIGIN      
        1 agaagaggat gcaagcctgt gagttgtgca gggctgtctc acgctgaggg cacctgtgct
       61 cacaggctca caccttgggg cttccgcggc ctccgagctt tgtcaaataa agtgcccgtg
      121 gtgcagccct ctcacgcggt ccacccgctc acccccctca tcacctacag cgacgagcac
      181 ttttctccgg gatcccaccc gtcacacatc ccgtcagatg tcaactccaa gcaaggcatg
      241 tccagacacc ctccagctcc tgaaatcccc accttctacc ccctgtctcc gggcggcgtt
      301 ggacagatca ccccacccat tggctggcaa ggtcagcctg tttatcccat cacgggtgga
      361 ttcaggcaac cctacccatc ctcactgtca ggcgacactt ccatgtccag gttttcccat
      421 catatgattc ctggtccccc tggcccccac acaactggca tccctcatcc agctattgta
      481 acacctcagg tcaaacagga gcacccccac acggacagtg acctaatgca cgtgaagcct
      541 caacacgaac agagaaagga gcaggagccc aaaagacctc atattaagaa gcctctgaat
      601 gctttcatgt tatatatgaa agaaatgaga gcgaatgtcg tagctgagtg cacgctaaag
      661 gagagtgcag ctatcaacca gatcctgggc agaagatggc acgccctctc ccgggaagag
      721 caggccaaat actatgaact agcacggaaa gagagacagc tacacatgca gctttatcca
      781 ggctggtcag cgcgagacaa ttatggcaag aagaagaaga ggaagagaga gaagctacag
      841 gagtcgactt caggtggtaa gagaagctcc ttcccaacgt gcaaagccaa ggcagcgacc
      901 ccaggccctc ttctggagat ggaagcttgt tgaaacccca gactgtctcc acagcttgcc
      961 cggctgaccc caaggaacac tgacagcaac cttaccctga ggtcactgct agcgctgacc
     1021 cgaagacaca gtcactgcca cctcttcctt ctgtcgtcta ctgcaagcgc cgacttccaa
     1081 aaagaaagcc gaaaacggtt gtttcggaaa aagaaaaaaa aatttttttt tcagcccgtg
     1141 agaaggctag caggccctgc ccactgagcg gcactgcctc cggtctctgt gcgatcctcc
     1201 agcatcttct gtgctgacct gtcacccttc cgcaaggaca gacaggacct tggctgtgtt
     1261 tgccttgtca cgtgcaacta gaaagccagc gaccagagcg ggtatcctgg tgtgagaatt
     1321 gtggaagact cctctcgctc ctgtcttcat tttcctatcc aaatttttat ttaacagtac
     1381 aaaaggatca agtgtgtgtt tgcttcttct tcttcttctt tttttttaac ttggaatttt
     1441 taaatttact ttttttttaa tttttatttt ccttgtatat ttttgctagc tctgagcttt
     1501 taagtgaaat tcataggtct gaaagagttt gaaataaaaa caagatgaaa agaagccttt
     1561 tacgtttttt tcttttttct tttctttctt ttttttttcc ttttttcttt tgtcctgaga
     1621 gatcttgtcc agtaaatggc ttctctgtga cacacagtgg cctctgccct gtgaagtgtc
     1681 tgatgaagct aaagagatag ccaaacccac tcctgttggt ggtcacattt ggcagcccgt
     1741 ctcacttagt ttctgatttt tttttaaata acaacagatc ttaacatctc ctttgagcga
     1801 acccgtttgc agttcatttt tttaatctct ttcttttcac tcctgtaaaa agcccagcac
     1861 ttgaattgtt ctttctttaa atgttctgtg tttgtatctg tttttattag ccgattagtg
     1921 ggaatttatg ccagttgtta aaatgagcat tgacgcacct gttatttttt tttttttaaa
     1981 tagcaaggca cagcctctgc cccaaacttg tcatcttaac gtttgtcatt ccagtttgag
     2041 ttaacgtgct gagcattttt taaaaagaag ctttgtaata aaacattttt ttaaaa
//
