LOCUS       XM_030254344            1045 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ligand dependent nuclear receptor
            corepressor-like (Lcorl), transcript variant X20, mRNA.
ACCESSION   XM_030254344
VERSION     XM_030254344.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Mar 12, 2024 this sequence was replaced by
            NM_001428441.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1045
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..1045
                     /gene="Lcorl"
                     /gene_synonym="Mlr1"
                     /note="ligand dependent nuclear receptor corepressor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 93 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:209707"
                     /db_xref="MGI:MGI:2651932"
     CDS             332..784
                     /gene="Lcorl"
                     /gene_synonym="Mlr1"
                     /codon_start=1
                     /product="ligand-dependent nuclear receptor
                     corepressor-like protein isoform X9"
                     /protein_id="XP_030110204.1"
                     /db_xref="GeneID:209707"
                     /db_xref="MGI:MGI:2651932"
                     /translation="MDKGRERMAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRH
                     RLMHCVGFESILEGLYGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCI
                     PSLDSSQSTPTEELSSQGQSHTDKIECQAESYLNALFRKKEPIRVSAL"
ORIGIN      
        1 ccgggtttct cgctcccgct cagggttttc gtggacggcg ggagcagtat ggcttgcctg
       61 agtaaactct ggggggagga ggggaaggga gtgggtaagg aggcggggtc agcggaagcg
      121 gcaggttgct tccttctctc cgcgctccct ccccgcctct ccccgaggga gcggtgggag
      181 ggggagggga gggcaggagg aaggtagtga cacgtgtcaa tcaacccccc tccggggggc
      241 gcgcgctccg gggctcgcgc cgagggctcg cgcccctgcc tcgtgcctgc gccgctcgta
      301 tgtaaatgag ggcgcgtgac gcgggacgca gatggacaag ggaagagaga gaatggccgc
      361 tgccgccgct gctgccgccg ccgccgctgc cgctcagtgc cggagccctc ggtgcgcggc
      421 ggagaggaga ggattccggc gggaactcga ctcttggcgc caccgcctca tgcactgtgt
      481 aggttttgag agtattttag aagggcttta tggaccacgg ctacgaagag acctcagttt
      541 atttgaagac tgtgaaccag aagagctgac tgactggtct atggatgaaa aatgttcatt
      601 ttgtaaccta cagagagaag cagtcagtga ttgtatacca tctcttgatt cttcacagtc
      661 aacgccaaca gaggagctat catctcaggg ccagtcccac actgataaga ttgaatgcca
      721 agcagaaagt tacctaaatg cactctttcg aaagaaagag ccaataagag tgtcagctct
      781 ctagtgctag ccatttgtta tccgcctcct gttctcaact tcttcatggg cacctctcaa
      841 aatatttttt gtgcttccca ctttcattat tttcttgcta ttctcaagtc tttaaaaagt
      901 gctggacgat gaagaagcta tagataggtt atattgcagg cctatcccta gtactgtatc
      961 tcttacatca tttcccagct ggtgtaccac ttaagtattt gtcagcttga gtatgcgtgc
     1021 ttgacattaa aaagtctgtt ctgta
//
