LOCUS       XM_030254343            3370 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus ligand dependent nuclear receptor
            corepressor-like (Lcorl), transcript variant X19, mRNA.
ACCESSION   XM_030254343
VERSION     XM_030254343.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030254343.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3370
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3370
                     /gene="Lcorl"
                     /gene_synonym="Mlr1"
                     /note="ligand dependent nuclear receptor corepressor-like;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 3 ESTs, 102 long SRA reads, 2
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 2 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:209707"
                     /db_xref="MGI:MGI:2651932"
     CDS             332..835
                     /gene="Lcorl"
                     /gene_synonym="Mlr1"
                     /codon_start=1
                     /product="ligand-dependent nuclear receptor
                     corepressor-like protein isoform X8"
                     /protein_id="XP_030110203.1"
                     /db_xref="GeneID:209707"
                     /db_xref="MGI:MGI:2651932"
                     /translation="MDKGRERMAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWRH
                     RLMHCVGFESILEGLYGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDCI
                     PSLDSSQSTPTEELSSQGQSHTDKIECQAESYLNALFRKKADSSIWVFKRSPTNSWTL
                     FLYSDGD"
ORIGIN      
        1 ccgggtttct cgctcccgct cagggttttc gtggacggcg ggagcagtat ggcttgcctg
       61 agtaaactct ggggggagga ggggaaggga gtgggtaagg aggcggggtc agcggaagcg
      121 gcaggttgct tccttctctc cgcgctccct ccccgcctct ccccgaggga gcggtgggag
      181 ggggagggga gggcaggagg aaggtagtga cacgtgtcaa tcaacccccc tccggggggc
      241 gcgcgctccg gggctcgcgc cgagggctcg cgcccctgcc tcgtgcctgc gccgctcgta
      301 tgtaaatgag ggcgcgtgac gcgggacgca gatggacaag ggaagagaga gaatggccgc
      361 tgccgccgct gctgccgccg ccgccgctgc cgctcagtgc cggagccctc ggtgcgcggc
      421 ggagaggaga ggattccggc gggaactcga ctcttggcgc caccgcctca tgcactgtgt
      481 aggttttgag agtattttag aagggcttta tggaccacgg ctacgaagag acctcagttt
      541 atttgaagac tgtgaaccag aagagctgac tgactggtct atggatgaaa aatgttcatt
      601 ttgtaaccta cagagagaag cagtcagtga ttgtatacca tctcttgatt cttcacagtc
      661 aacgccaaca gaggagctat catctcaggg ccagtcccac actgataaga ttgaatgcca
      721 agcagaaagt tacctaaatg cactctttcg aaagaaagct gattcaagca tctgggtctt
      781 caagaggtct cctaccaata gttggacttt atttttgtat agtgatgggg actaaacaag
      841 ctccttgagc atatgaggta agcactgtat tctaagctcc atccccagct gtggtggggc
      901 ccaagccgag gacattacct tagactgctt ccaccctaaa gtgttggcct aaaatcttgt
      961 cctgtgtttt actgtttagt actataatta aaggcaactg aaatcctgtt acatacatgc
     1021 cattccacaa ttctcttttc tggtacattt aaaatcctct ttgaaggaag aaacattcta
     1081 ttttctcaga ggcttaagcc tgttcttata ttatttccac acaaatatta aacttgctag
     1141 atttcctaaa ccattatact atacaaaatg gagaatgaag tatatgtacc tttctgaatg
     1201 aggaaggcat gataagtaat ttaaacctgt atcatgtagg aattgattca ttcttctaca
     1261 cagctataat ccacttggta gggaccacga atgggtgata aataatttaa ctgatctttt
     1321 attagtttta ggttctgcat tccacataag ctgtagtgat ttctgtaaat agagtataat
     1381 catcaccatt tgaaaatgtg ttccataata tacaataatt tttaagttgt agaatttaaa
     1441 taatataaca atacttgtag gatatttaag aaatttttaa gaataatttt cttctccaaa
     1501 ataatctacc aactgagaat attaatcttc acaaattttg aactttaggg actgagaata
     1561 ttttagtatt ttattttaga cctttgtata ataagtactg tctaatatgt tgtacagtat
     1621 agccattcat caagttatat atgtgtatgc ttctttatat ctagagaaat agcaaaaagg
     1681 agaaaaagaa agtgttattt cttgttatcc atgagagatt tgttgtagga ccctgcagat
     1741 acaaaacttc ctacttgctc atgtctcata aggtggtaca atatttgcat aatctacata
     1801 tatctttcta tgtatttcct tcctacaata agcatttctg aataacttag aaattataat
     1861 tctgtataaa tagttgttaa actgttctta agaaataatg gcaagaaaca tatctgtaca
     1921 tgtttgatat aatttttcat gaatattttt tatccatacc ttgaatctaa gaatatggaa
     1981 cctacagctc atgaaaagag ctactattct agtcatacaa tttatatata atttaaataa
     2041 acactttatt tatttaataa tgtctttttt aaaaaatgtg catacactag ccaggtgttg
     2101 gtgatacacc tttaatccca gaaggaggtg attttctgag tttgaggcca acctagtcta
     2161 cagagcaagt cccacgacag ccaaagctgc agagagaaac cctatcaaaa aaaaaaaaag
     2221 caaaaatgtt tggacattat gctctcatct ctggtatttg cagtagtatg acacaaagct
     2281 ttagaacatc acatgtaaca ctgcaatgta ggactattag atcagactaa taaagtagaa
     2341 ttatgatcaa aataacatgc taaactgggt atataaagac ccatgagccc tcaaccgtat
     2401 actgggctac atttacttga agaaagcttg gagtatgtgg tccaccccag ggaagagcgc
     2461 accaattagt tgtacagtgc tcaaatggtt agctttgaaa atatgcagat gccagatgtg
     2521 aatctagtgg aaatagaaaa cagaattata gatttatgca aatgcctcac agaaaagccc
     2581 aacagtggtc agtggccatc aagagaatgt tgttcatggg tcacttgggt atttaaagga
     2641 gtaaatcagg tcttttatat agaataaagg attctcagaa tgctgataaa atgaaagtat
     2701 ccaatcatca ggaaaacatt aatctataaa gtcatgcagg atgcagggaa taaaggaata
     2761 tggggtacag atatttgata caaaagtaac tttgtatcag aaatctacag tttttaagaa
     2821 tttggaaagt agaaagcttg tcaatgctct aaaatgcttc cttcaaaagg aaggttttac
     2881 aatctgtaac ttgcagccag actggttgat ctgtgatggg cagggactac gattttgaat
     2941 ctgaatttgt tgagttgttt aaccaacagc atttcaaatt cctacaaatg aagagagaaa
     3001 cggaatgaga aagtaaacag ttcagtgata caaagagaca gttccttagc ctcatcatca
     3061 cgtgtagaag tacatctgtg aactgggcat cagcaatgtc catagaggac attggaacca
     3121 gctcaaatac cctcctttat gatggcaaat tggagatcac tctcatcact gtgaagtatg
     3181 gctccgttgg cagggtagat ggatacataa aactgtacag gacagtaaat ccaaccctcc
     3241 tactaccggc ttggtccagg caccttgtgg actctgtcca gtttttgatg actgccatga
     3301 aggtagagct ttcaccatct aattacattt gtatgacagg gtggctcaaa ttttaataaa
     3361 gagctgaaaa
//
