LOCUS       XM_006498215             846 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lipocalin 6 (Lcn6), transcript variant X5,
            mRNA.
ACCESSION   XM_006498215
VERSION     XM_006498215.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006498215.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..846
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /note="lipocalin 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
     CDS             179..562
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /codon_start=1
                     /product="epididymal-specific lipocalin-6 isoform X5"
                     /protein_id="XP_006498278.1"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
                     /translation="MKVILLTAALLALVSIPWLQAVWLGRLDPKQLLGPWYVLAVASR
                     AKDFMVEKDMKNVEGVVVTLTPDNKLRVESSRHGLYLLPPVLAEASSLHKAMGTFQSY
                     WIFIPSPANETSSVLSVSHPRTGDP"
ORIGIN      
        1 agctgggcac caaggccacc acagtttaac agcgccctcc tccaccctga gtaatttggc
       61 tttgagaaag attgggataa tgtcaagaca ggtagtgacc acccacacca aggcactcag
      121 atatataagc tgtttcctgg ttggagacat cctgtagtgt gcctgtacct ctcggagaat
      181 gaaggtgatc cttctgactg ctgctcttct tgctttggtc tctattccct ggttgcaggc
      241 agtgtggctg ggaaggctgg accctaagca gctcctcggt ccctggtatg tcctggctgt
      301 ggcctcccgt gcaaaggact tcatggtgga gaaggacatg aagaatgtgg aaggtgtcgt
      361 ggtgactctt actccagata acaaattgag agttgagtcc tctcggcatg ggctctactt
      421 gttgcctcca gtactggcag aagcatccag tttacacaag gctatgggga cattccagtc
      481 ctactggatc ttcattccct ccccagccaa cgaaacctcc tctgtgcttt ctgtctccca
      541 tccaaggact ggagacccct gagaaatctc cctacagaac ctgtcctgct gtaattggtg
      601 ggcctatgcc tctgcctccc atgcagggag tgtaggtgta gatggctcac cacccagcac
      661 atgtatccct gatacaagga gcttaaatat gtataggcct tctatgcttc cttcctagtg
      721 agctcccctt aaatattctg catatttgtt tctctacaat gtttcttact tgtttttggg
      781 aaaggggaat ttaagcaatt aattagtctg tgataaaaaa ttagttacaa atatatttcc
      841 cacttt
//
