LOCUS       XM_006498213             931 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lipocalin 6 (Lcn6), transcript variant X3,
            mRNA.
ACCESSION   XM_006498213
VERSION     XM_006498213.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006498213.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..931
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /note="lipocalin 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 EST, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
     CDS             144..899
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /codon_start=1
                     /product="epididymal-specific lipocalin-6 isoform X3"
                     /protein_id="XP_006498276.1"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
                     /translation="MKVILLTAALLALVSIPWLQAVWLGRLDPKQLLGPWYVLAVASR
                     AKDFMVEKDMKNVEGVVVTLTPDNKLRVESSRHGPGGCHQSTVELLKQESRWVFENPS
                     LGILDYRVLGTNFKDYAVVFTQLEFGDEVFNTVSLYSRTEMASHEAMQLFTKWSQGLG
                     FLSQQQAQLQKDLRPVWTVSSTEACGWDPGNCYSPILTTGSLLLQSLVHTRSSSECHT
                     LDIAPQHPGILVEVGRHGLCTVAGGTGADWLLS"
ORIGIN      
        1 cctcctccac cctgagtaat ttggctttga gaaagattgg gataatgtca agacaggtag
       61 tgaccaccca caccaaggca ctcagatata taagctgttt cctggttgga gacatcctgt
      121 agtgtgcctg tacctctcgg agaatgaagg tgatccttct gactgctgct cttcttgctt
      181 tggtctctat tccctggttg caggcagtgt ggctgggaag gctggaccct aagcagctcc
      241 tcggtccctg gtatgtcctg gctgtggcct cccgtgcaaa ggacttcatg gtggagaagg
      301 acatgaagaa tgtggaaggt gtcgtggtga ctcttactcc agataacaaa ttgagagttg
      361 agtcctctcg gcatgggcca ggcggatgtc atcagagcac cgtggagctg ctgaagcaag
      421 agtcccgatg ggtgtttgag aatccctctc tgggtatatt ggattatcgg gtactgggca
      481 ctaacttcaa agactacgct gtcgtcttca cacagctgga atttggggat gaggtcttca
      541 acacagtgtc gttgtacagt cggacagaga tggctagcca cgaagccatg cagctattca
      601 ccaaatggag ccaggggctg ggcttcttgt ctcaacagca ggctcagctg cagaaggacc
      661 tcaggcctgt ctggacagtt tcttcaacag aggcttgtgg gtgggatcct gggaactgct
      721 acagccccat tctcacaact ggctcgcttc ttctacagtc acttgtgcac acaagatcct
      781 ccagtgagtg ccacaccctg gatatagcac cacagcatcc tggcatcctg gtggaggtgg
      841 gcaggcacgg tctttgcaca gtggctggtg gtactggcgc tgattggctg ctctcctagg
      901 ctcttgcttg ggttcaaaat aaaatgattt c
//
