LOCUS       XM_006498212             947 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus lipocalin 6 (Lcn6), transcript variant X2,
            mRNA.
ACCESSION   XM_006498212
VERSION     XM_006498212.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006498212.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..947
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..947
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /note="lipocalin 6; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 2 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
     CDS             157..915
                     /gene="Lcn6"
                     /gene_synonym="9230101D24Rik"
                     /codon_start=1
                     /product="epididymal-specific lipocalin-6 isoform X2"
                     /protein_id="XP_006498275.1"
                     /db_xref="GeneID:620709"
                     /db_xref="MGI:MGI:3045364"
                     /translation="MKVILLTAALLALVSIPWLQAVWLGRLDPKQLLGPWYVLAVASR
                     AKDFMVEKDMKNVEGVVVTLTPDNKLRVESSRHGPGGCHQSTVELLKQESRWVFENPS
                     LGILDYRVLGTNFKDYAVVFTQLEFGDEVFNTVSLYKAAPSCPGRTEMASHEAMQLFT
                     KWSQGLGFLSQQQAQLQKDLSSTEACGWDPGNCYSPILTTGSLLLQSLVHTRSSSECH
                     TLDIAPQHPGILVEVGRHGLCTVAGGTGADWLLS"
ORIGIN      
        1 agtttaacag cgccctcctc caccctgagt aatttggctt tgagaaagat tgggataatg
       61 tcaagacagg tagtgaccac ccacaccaag gcactcagat atataagctg tttcctggtt
      121 ggagacatcc tgtagtgtgc ctgtacctct cggagaatga aggtgatcct tctgactgct
      181 gctcttcttg ctttggtctc tattccctgg ttgcaggcag tgtggctggg aaggctggac
      241 cctaagcagc tcctcggtcc ctggtatgtc ctggctgtgg cctcccgtgc aaaggacttc
      301 atggtggaga aggacatgaa gaatgtggaa ggtgtcgtgg tgactcttac tccagataac
      361 aaattgagag ttgagtcctc tcggcatggg ccaggcggat gtcatcagag caccgtggag
      421 ctgctgaagc aagagtcccg atgggtgttt gagaatccct ctctgggtat attggattat
      481 cgggtactgg gcactaactt caaagactac gctgtcgtct tcacacagct ggaatttggg
      541 gatgaggtct tcaacacagt gtcgttgtac aaggctgctc cttcctgccc aggtcggaca
      601 gagatggcta gccacgaagc catgcagcta ttcaccaaat ggagccaggg gctgggcttc
      661 ttgtctcaac agcaggctca gctgcagaag gacctttctt caacagaggc ttgtgggtgg
      721 gatcctggga actgctacag ccccattctc acaactggct cgcttcttct acagtcactt
      781 gtgcacacaa gatcctccag tgagtgccac accctggata tagcaccaca gcatcctggc
      841 atcctggtgg aggtgggcag gcacggtctt tgcacagtgg ctggtggtac tggcgctgat
      901 tggctgctct cctaggctct tgcttgggtt caaaataaaa tgatttc
//
