LOCUS       NM_010695                774 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus lipocalin 4 (Lcn4), mRNA.
ACCESSION   NM_010695
VERSION     NM_010695.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 774)
  AUTHORS   Charkoftaki,G., Wang,Y., McAndrews,M., Bruford,E.A., Thompson,D.C.,
            Vasiliou,V. and Nebert,D.W.
  TITLE     Update on the human and mouse lipocalin (LCN) gene family,
            including evidence the mouse Mup cluster is result of an
            'evolutionary bloom'
  JOURNAL   Hum Genomics 13 (1), 11 (2019)
   PUBMED   30782214
  REMARK    Review article
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 774)
  AUTHORS   Suzuki,K., Lareyre,J.J., Sanchez,D., Gutierrez,G., Araki,Y.,
            Matusik,R.J. and Orgebin-Crist,M.C.
  TITLE     Molecular evolution of epididymal lipocalin genes localized on
            mouse chromosome 2
  JOURNAL   Gene 339, 49-59 (2004)
   PUBMED   15363845
REFERENCE   3  (bases 1 to 774)
  AUTHORS   Kasik,J.W. and Rice,E.J.
  TITLE     An increase in expression of the lipocalin 24p3 is found in mouse
            uterus coincident with birth
  JOURNAL   Am J Obstet Gynecol 173 (2), 613-617 (1995)
   PUBMED   7544071
REFERENCE   4  (bases 1 to 774)
  AUTHORS   Miyawaki,A., Matsushita,F., Ryo,Y. and Mikoshiba,K.
  TITLE     Possible pheromone-carrier function of two lipocalin proteins in
            the vomeronasal organ
  JOURNAL   EMBO J 13 (24), 5835-5842 (1994)
   PUBMED   7813422
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from D38581.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: D38581.1, BC114544.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849375,
                                           SAMN00849380 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..774
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="DDY"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 18.99 cM"
     gene            1..774
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /note="lipocalin 4"
                     /db_xref="GeneID:16821"
                     /db_xref="MGI:MGI:102668"
     exon            1..108
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..573
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /function="transportation of lipophilic molecules,
                     possible pheromone-carrier"
                     /note="vomeronasal secretory protein 2; VNSP II;
                     vomeronasal secretory protein II"
                     /codon_start=1
                     /product="vomeronasal secretory protein 2 precursor"
                     /protein_id="NP_034825.1"
                     /db_xref="CCDS:CCDS15810.1"
                     /db_xref="GeneID:16821"
                     /db_xref="MGI:MGI:102668"
                     /translation="MKSLLLTVTLSSLVATLQTYDDLPFISEEDKLSGVWFIKATVSQ
                     RREVEGETLVAFPIKFTCPEEGTLELRHTLASKGECINVGIRLQRTEEPGQYSAFWGH
                     TLFYIYDLPVKDHYIIYCESHPFQKISQFGYLIGKYPEENQDTLEVFKEFIQHKGFLQ
                     EKIGVPEQRDRCIPIHDSAHQDHKC"
     exon            109..239
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     exon            240..310
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     exon            311..421
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     exon            422..523
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     exon            524..550
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     exon            551..774
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      774
                     /gene="Lcn4"
                     /gene_synonym="A630045M08Rik; Vnsp2"
ORIGIN      
        1 gcacacaacc tgaccatgaa gagcctgctc ctgactgtca cactgtctag tctagtggca
       61 actctacaga cctatgatga ccttcccttc atctcagaag aagataaact ctcaggtgtc
      121 tggttcataa aggccacagt gagtcaaaga agagaagtgg agggggagac tctggttgca
      181 tttcctatta aatttacatg cccagaagaa ggaaccttgg agctcaggca cactctcgca
      241 tctaagggag agtgcattaa tgtaggaatt cgtttgcaga gaacagagga gcctggtcaa
      301 tacagtgcct tttggggcca tactctcttc tatatatatg atcttccagt gaaggaccac
      361 tacatcatat actgtgaaag ccatccgttt cagaaaatat cccaatttgg atatctcata
      421 ggaaagtatc cggaagaaaa ccaggatacc ttggaagtat ttaaggaatt catacagcat
      481 aaaggatttc tccaagaaaa aatcggtgtg cctgaacaga gggatcggtg tattcccata
      541 catgacagtg cccaccagga ccacaaatgc tgagacagac ttgccagtag gacctgacca
      601 tgaccttagt ggactgacta ctattcttcc tggacaacat ttctctgagc tgcatttccc
      661 caatctgtgt tctactcctt aaattgtacc accctctgga cttcctaagc tcctgattta
      721 ccttctaacc cttgctctga gacccctctg aatccaataa aaaaattagc agtt
//
