LOCUS       NM_001166172             803 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus late cornified envelope 6A (Lce6a), transcript variant
            1, mRNA.
ACCESSION   NM_001166172
VERSION     NM_001166172.2
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 803)
  AUTHORS   Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa
            K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito
            R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T,
            Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe
            M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held
            WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA,
            Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts
            P, Muramatsu M, Okazaki Y, Kawai J and Hayashizaki Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132234.5.
            
            On Jan 12, 2022 this sequence version replaced NM_001166172.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BY708874.1, AK019072.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849381, SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-74                AC132234.5         20609-20682         c
            75-364              AC132234.5         20145-20434         c
            365-803             AC132234.5         19095-19533         c
FEATURES             Location/Qualifiers
     source          1..803
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     gene            1..803
                     /gene="Lce6a"
                     /gene_synonym="2210420J11Rik"
                     /note="late cornified envelope 6A"
                     /db_xref="GeneID:78382"
                     /db_xref="MGI:MGI:1925632"
     exon            1..74
                     /gene="Lce6a"
                     /gene_synonym="2210420J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            75..364
                     /gene="Lce6a"
                     /gene_synonym="2210420J11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            365..803
                     /gene="Lce6a"
                     /gene_synonym="2210420J11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             386..631
                     /gene="Lce6a"
                     /gene_synonym="2210420J11Rik"
                     /codon_start=1
                     /product="late cornified envelope protein 6A"
                     /protein_id="NP_001159644.1"
                     /db_xref="CCDS:CCDS50976.1"
                     /db_xref="GeneID:78382"
                     /db_xref="MGI:MGI:1925632"
                     /translation="MSQQKPQLSELPNAPIYSPPKGPNLSLSTCSTSCGTSCSAGCSS
                     YSKRLRLQNTVSHKEIHHPQPRCLRGSTTYHCKEEEC"
ORIGIN      
        1 aggacagcaa cagatctttg agagaatcca cagagttcag aagacagagg actctgatgt
       61 gactatgaaa ttaggacttg ggcagtgtac tcatttctac gtaagctagc ctgaaggctt
      121 cagatttctc atcgattgct tacccggaat tccctttgaa atgcaccaca gctgtataca
      181 gatgagaaat cgtgccttgg gaattatgaa atacctcgat agatcatcca ctctatgaca
      241 gcccttcaat aataagtagc ctagagcttt cagctggagg atgtataaaa cagcatcgtc
      301 atttctggcc ccataaaacc tcaggctcct cttagggtga cttgtctact catcttcctg
      361 gaagatttaa cgttttagct gagcaatgtc acagcagaag ccacaacttt cagagctgcc
      421 aaatgctccc atatattcac ctcctaaagg cccaaacctc tctttgagta cctgttcaac
      481 ttcttgtggg acttcttgtt cagcaggctg ttcttcctac tcaaaaaggc tgaggctcca
      541 gaacactgtc agccataagg aaattcatca cccacaacct cgctgtctta ggggtagtac
      601 cacctaccac tgcaaagaag aagagtgcta agaaactggg cacaaacgag ggtaaatagc
      661 tacaacaacc tttccagata aactcatgaa tttcaccagg aaggccaggc cctccacctc
      721 tcttggctag aaaaacattt cttgtttctt tctttagcct accctttcag ttcaacaaca
      781 ataaaattga tcatggtgca taa
//
