LOCUS       NM_001039594             568 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus late cornified envelope 3A (Lce3a), mRNA.
ACCESSION   NM_001039594 XM_619929
VERSION     NM_001039594.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 568)
  AUTHORS   Krishnaswami SR, Kumar S, Ordoukhanian P and Yu BD.
  TITLE     Fate and plasticity of the epidermis in response to congenital
            activation of BRAF
  JOURNAL   J Invest Dermatol 135 (2), 481-489 (2015)
   PUBMED   25202828
REFERENCE   2  (bases 1 to 568)
  AUTHORS   Nagarajan P, Chin SS, Wang D, Liu S, Sinha S and Garrett-Sinha LA.
  TITLE     Ets1 blocks terminal differentiation of keratinocytes and induces
            expression of matrix metalloproteases and innate immune mediators
  JOURNAL   J Cell Sci 123 (Pt 20), 3566-3575 (2010)
   PUBMED   20930145
REFERENCE   3  (bases 1 to 568)
  AUTHORS   Brown,S.J., Tilli,C.M., Jackson,B., Avilion,A.A., MacLeod,M.C.,
            Maltais,L.J., Lovering,R.C. and Byrne,C.
  TITLE     Rodent Lce gene clusters; new nomenclature, gene organization, and
            divergence of human and rodent genes
  JOURNAL   J Invest Dermatol 127 (7), 1782-1786 (2007)
   PUBMED   17410201
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC132274.3.
            
            On Mar 18, 2022 this sequence version replaced NM_001039594.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CJ238734.1, CJ043599.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849376, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                AC132274.3         76661-76703
            44-568              AC132274.3         77099-77623
FEATURES             Location/Qualifiers
     source          1..568
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     gene            1..568
                     /gene="Lce3a"
                     /gene_synonym="EG545548"
                     /note="late cornified envelope 3A"
                     /db_xref="GeneID:545548"
                     /db_xref="MGI:MGI:3645650"
     exon            1..43
                     /gene="Lce3a"
                     /gene_synonym="EG545548"
                     /inference="alignment:Splign:2.1.0"
     exon            44..568
                     /gene="Lce3a"
                     /gene_synonym="EG545548"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..357
                     /gene="Lce3a"
                     /gene_synonym="EG545548"
                     /codon_start=1
                     /product="late cornified envelope 3A"
                     /protein_id="NP_001034683.1"
                     /db_xref="CCDS:CCDS38519.1"
                     /db_xref="GeneID:545548"
                     /db_xref="MGI:MGI:3645650"
                     /translation="MSCQQSQKQCQPPPKCPSPKCSPKCPPKSTTQCLPAASSCCATS
                     SGGCSVPSSEGGCCLSHHRRRSHRCRRRSSSSCDRGSGQQSGGSGCGHSSGGCC"
ORIGIN      
        1 atccacagcc tgctcagaaa gtctcctatc accttcccat ctggtccagt tcctgccgag
       61 atgtcctgcc agcagagtca gaagcagtgc cagcctcctc ccaagtgccc ttccccaaag
      121 tgctccccaa agtgcccccc aaagagcaca acacagtgtc tgcctgcagc ctcttcgtgc
      181 tgtgctacaa gctctggggg ctgcagtgtc cccagctctg agggaggctg ctgtctgagc
      241 caccacaggc gcaggtccca cagatgcagg cgcaggagct ccagttcctg tgaccgtggc
      301 agtggtcagc agtctggggg ttcaggctgt ggccacagct ctgggggctg ctgctaactt
      361 gcatcctgag tttgagacaa aagggtttgg agtactgagc agtagtgcca tgttggcttg
      421 ttctttcttc agatatcaga atctgtcttg ggctctgtgt tcttgagctc ttctaatgga
      481 tttcccaaaa gcctggttgc ttctccttct catggttcca tcacctgtgt ccaaccatgt
      541 agatgaataa aattctttct caatatca
//
