LOCUS       NM_152822               2623 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus LAS1-like (S. cerevisiae) (Las1l), transcript variant
            2, mRNA.
ACCESSION   NM_152822 XM_621054
VERSION     NM_152822.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Fanis,P., Gillemans,N., Aghajanirefah,A., Pourfarzad,F.,
            Demmers,J., Esteghamat,F., Vadlamudi,R.K., Grosveld,F.,
            Philipsen,S. and van Dijk,T.B.
  TITLE     Five friends of methylated chromatin target of
            protein-arginine-methyltransferase[prmt]-1 (chtop), a complex
            linking arginine methylation to desumoylation
  JOURNAL   Mol Cell Proteomics 11 (11), 1263-1273 (2012)
   PUBMED   22872859
  REMARK    GeneRIF: Recruitment of the protein complex 5FMC to Zbp-89, a
            zinc-finger transcription factor, affects its sumoylation status
            and transactivation potential.[5FMC]
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Krull,M., Petrusma,M., Makalowski,W., Brosius,J. and Schmitz,J.
  TITLE     Functional persistence of exonized mammalian-wide interspersed
            repeat elements (MIRs)
  JOURNAL   Genome Res 17 (8), 1139-1145 (2007)
   PUBMED   17623809
REFERENCE   3  (bases 1 to 2623)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Kitamura,H., Nakagawa,T., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of FLJ
            genes: the complete nucleotide sequences of 110 mouse
            FLJ-homologous cDnas identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (2), 127-135 (2004)
   PUBMED   15449545
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY059480.1, BC141155.1 and BM570808.1.
            
            On Mar 13, 2014 this sequence version replaced NM_152822.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660815.48571.1,
                                           SRR1660811.207781.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164140
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-63                BY059480.1         2-64
            64-2430             BC141155.1         1-2367
            2431-2623           BM570808.1         1-193               c
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 42.58 cM"
     gene            1..2623
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /note="LAS1-like (S. cerevisiae)"
                     /db_xref="GeneID:76130"
                     /db_xref="MGI:MGI:1923380"
     exon            1..317
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            318..443
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            444..513
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            514..595
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            596..877
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            878..924
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            925..1034
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1035..1120
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1121..1327
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1328..1475
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1476..2125
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2126..2276
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2277..2613
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2583..2588
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2605
                     /gene="Las1l"
                     /gene_synonym="1810030A06Rik; 5830482G23Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggggtcatat tctccaattg gctaatggtg tgccgtttgg agcaagggca gtgtgtagcg
       61 cagcatgctg cgcacttcag ttgaggttgg gaatccgggc ggagacctgc tcttggctcc
      121 cagggcatgg atcgcgtgtg gcgtgcgtgg gacgggcagt ccttcaaaga gaaccagcct
      181 gagtcgccga gtgccagggg tatcgtcgtc tcttggctca gcagggctga gtgggagcaa
      241 gtgacggttt atctgttctg cgatgatcac aagttgcagc agtatgcgct gaaccgaatt
      301 acagtatgga ggagcaggtt aggcaacgaa ctgcccctgg cagtggcttc tactgctgac
      361 ctggtaagat gcaagctcat cgatgcagcc ggtaccttgg gcactgatga acttagactg
      421 ctctatggca tggcattggt caggtttgtg aatcttatct cagagaggaa gacaaaatgt
      481 tctaaccttc ccctcaaata cctggctcag gaggtgaaca ttccagactg gattgttgaa
      541 cttcgccaca acttgaccca caagaaaatg ccccatataa atgagtgccg cagaggttgc
      601 tactttgtcc tcaactggct ccagaagaca tactggagcc gtcaactgga aggcagcctg
      661 aaagaaacct gggagttgga tgaggaccag ctagatgcag aagatcctga agaagaggaa
      721 cgtgaaatta ttgccgatga tgtacttgaa gagataccag agcctcagga tgatgacaaa
      781 gatgaagagt tggctgtcga ggatgatgca aatactaaag gcaatgagga ggtggcttct
      841 catccagaac catcttcaag acacaaggag ttgtatgaga aagcgcgaga attgctggta
      901 tcctatgaag aggaacagtt taaggtgctg gagaaacaca ggcatttgct tcaggctatt
      961 aaagtgtgga ataatctttc cccacgtgta caatgtatcc tagaagaact caagagcatt
     1021 tcatgggaga acagggatgc tgtgctggat gcttttctag atgatggttt cctcattcct
     1081 acgtttgagc agttggcagc tttgcagata gagtatgaag aaaacatcga cttgaatgaa
     1141 gtgttggtgc caaagccctt ctctcagttc tggcagcccc tgctcagggg cctgcactcc
     1201 cagaccttca cgcaggccct gctagagagg atgttctccg agttgtctac cgtggggagc
     1261 actgggatcc ggcctaccta catccttaga tggaccgttg aactgatcgt ggccaacacc
     1321 aagactggac ggaatgctcg gcggttttct gcaagccagt gggaagcaag aaagagctgg
     1381 aggctgttca attgctctgc cacccttgac tggccgcagg tgatcgagtc ctgcttgggc
     1441 tcaccatgct gggccagccc tcaactcctt caggtagtct tcaaagccat gggacaggtc
     1501 ttgccagatg aagagcagga gaagctgctg cgagtctgtt ccatttatac tcagaatgga
     1561 gagaatggct tggcaaaggc gattgaaggt tcctcctcct cctccactgg caaagctccg
     1621 tacacactgg ataccttaca tgaggaccta caaccacctg gtaccaactg tgagtccgaa
     1681 gaaagtattc aacagaagga gcaaggcaac cttaaggatg tcaagcaaga ggagaaaaag
     1741 gagaatgagg aagaggagaa ggaggaggag gagatggagg aggaggaaga agaggaggag
     1801 gaagaaaagg aggaggaaga ggaagagcag gagcaggaag aacaccagga ggaagaacag
     1861 gaggaggagg aggaggaaga gaaccaaaag gtctttcaag atcagatgga ggcagatgtt
     1921 gaggaaagtg atgatgtaga agaagaggaa gaagtagatg atgaagaaga agatgaagat
     1981 gatgactatg atgatgatga agaagaagac aggatggaag tgggggcctt ctctcttgca
     2041 cagggatcca gtgtttttga gaatactagg accacgtctc ggaagagaga agcactgcag
     2101 ggttcagcat ggcaagtaag ctctgaagat gtgcgatggg gtacattccc tctaggccgg
     2161 ctaccaggcc agactgagga cccagcagag cttatgctgg ataattatga caccatgtat
     2221 cttttggacc aacctgtaat agagcaccgg ctagaacccc agaagtccaa aagtagcact
     2281 ctgagcctat gttgtggtgg cagcaatacc aactctagca gtagcagcag cagcggcaac
     2341 atggagggcc ttctctggaa ccaaggacaa atgcatgggc tcaaagctgg cctgcagctc
     2401 ttctgatggc tgtcctgatg ccagtgtcca tgtagctctg ccattggcac agctcagtcc
     2461 agaatccacc catggtacag actggacaac ctgagagaca gatcagcctt attaattcag
     2521 ctttttacca caatggaaat ctgaatgatt tttcccccgt tttctgttgt gttttgaaaa
     2581 ataataaaca gatttttgtc atggtgtttg tgaaaaaaaa aaa
//
