LOCUS       XM_017316524            6830 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus La ribonucleoprotein 4 (Larp4), transcript
            variant X1, mRNA.
ACCESSION   XM_017316524
VERSION     XM_017316524.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6830
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..6830
                     /gene="Larp4"
                     /gene_synonym="DXErtd793; DXErtd793e"
                     /note="La ribonucleoprotein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     mRNAs, 23 ESTs, 2572 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 27 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:207214"
                     /db_xref="MGI:MGI:2443114"
     CDS             664..2646
                     /gene="Larp4"
                     /gene_synonym="DXErtd793; DXErtd793e"
                     /codon_start=1
                     /product="la-related protein 4 isoform X1"
                     /protein_id="XP_017172013.1"
                     /db_xref="GeneID:207214"
                     /db_xref="MGI:MGI:2443114"
                     /translation="MCKEYEVMYSPSCETTRNTADVEESADGMILGPEDLSYQLYDVS
                     GESSSAISTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKK
                     LTTNTDLILEVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPVEEVKALFKNEN
                     CPKVISCEFAHNSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKN
                     GYRLMDSSMYTQPIQTPTQYPSPVFMQPVYNPQQYSVYSLVPQSWSPSPAPYFETPLA
                     PFPNGSFVNGFSSPGSYKTNAAAMNMGRPFPKNRVKPHFRSSSGSEHSTEGSVSLGDG
                     PLSRSSSRIFLSERHNPTVTGQQEQTYLPKEAPILQMEQNGDFGRGRRTLFRGRRRRD
                     DDRIPRPQPAATEAKAPTPKFDLLATNFPPLPGSSSRVPDELGLENRMSDVVKGVCRE
                     KDSEDVRVSCPVPAEDGQTDCTSAPLSISPSPPCTAEPPVLSTTQQEQDQMEDSAVPK
                     DTLNPVAVPVSSPTATKPSPANTASPCTSNINPPRAVALQEPRKLSYAEVCQKPPKEP
                     SPVLVQPLRELRSNAVSPTRNEENGAPEKPVEKPHEKPETRASKDHSGFRGNTIPRGA
                     AGKIREQRRQFSHRATPQGVTRRNGKEQYVPPRSPK"
ORIGIN      
        1 aggcctcgcg gggccgcctg ggacggagcg agcaacatgt gggagcgcgg gagaagggga
       61 actgcgggcg cggtggggtt ttgtctcgct aactggggag gggcgtgttg ttgttgtttt
      121 tttttttttt taagagagta gaaagctcgc ccgctccccc cacctccgga ccccccaagc
      181 tgcaccaaaa ttttgttggg ttgcgtccgc cggctctgga acgttcgagg ggggtgcggg
      241 gggagaaagc gagctggtgc gaacggcgaa gccccacagg ggtcggaagc cttgaaaggc
      301 accgctctga ccttttgtaa aagttactcg ggctgcggct gcgtggtgcg ggttgattcc
      361 gcgaacctgt tcggggccag ttacaaggaa aattgcaaag gaggagagaa acttaggtga
      421 agccggggtt ttgtggtggt gttggatcgg tggaaatacc gtttctattg gaccgtctac
      481 cgtccgcctg tttgagattt caaggtgaca tctaaaggca ctggtttaaa tcctaatgcc
      541 aaagtatggc aagaaattcc ttctggaaat ccggatggca ctcctgtaac tgaaccctct
      601 tggcatgaaa ctgcagccac atctggatct caccctgagg gccatacaga actttcagaa
      661 gatatgtgta aggaatatga agtaatgtat tctccatctt gtgaaaccac aaggaatact
      721 gcagatgttg aagagtcagc tgatggaatg atcttaggac cggaagacct gagttaccaa
      781 ctctatgatg tttctggaga aagcagttca gcaatttcta cagaagattt aaaagaatgt
      841 ctgaaaaaac aattggaatt ctgtttctca cgagaaaatt tatcaaagga cctttacttg
      901 atatctcaaa tggatagtga tcagttcgtc ccaatatgga cggttgccaa catggaagaa
      961 attaaaaaat tgactacaaa tacagattta attcttgaag tattgagatc ttcccctatg
     1021 gtacaagttg atgagaaggg agaaaaggtg agaccaagtc ataagcgatg tattgtgatt
     1081 ctcagagaga ttcctgagac aacgcctgta gaggaagtga aagctttgtt taaaaatgaa
     1141 aactgcccca aagtgataag ctgtgagttt gcgcacaaca gcaactggta catcactttc
     1201 cagtcagaca cagatgcaca gcaggctttt aaatacttaa gagaagaagt taaaacattt
     1261 cagggcaagc caatcatggc aaggataaaa gccatcaata cattttttgc taagaatggt
     1321 tatcgattaa tggattctag tatgtatact caacctattc agactcctac ccaatatccc
     1381 tcaccagtct tcatgcaacc agtgtataat cctcagcagt actcagtgta tagtcttgtg
     1441 cctcagtctt ggtctccaag tcctgcacct tactttgaaa caccactggc tccctttccc
     1501 aatggtagtt ttgtgaatgg ctttagttca ccaggatctt acaaaacaaa tgctgctgct
     1561 atgaatatgg gccgaccatt cccaaaaaat cgtgtgaagc ctcattttag gtcatccagt
     1621 ggttcagaac actcaacaga gggctccgtg tcattggggg atggaccact gagcagatct
     1681 agttcaagga tctttctttc tgaacggcat aacccaacag taacagggca gcaggaacaa
     1741 acttatcttc caaaggaggc tcccatttta cagatggaac agaatgggga ctttggaaga
     1801 ggcaggcgaa ctctcttcag aggccgaagg cgaagggatg atgacaggat cccaagaccc
     1861 caacctgcag caactgaagc caaggctcca actccgaagt ttgatttgct tgctacaaat
     1921 ttccctcctt tacctggaag ctcatcgaga gtgccagatg aacttggttt ggagaacaga
     1981 atgtctgatg tcgttaaagg tgtctgcaga gaaaaggaca gcgaggacgt gcgagttagt
     2041 tgcccagtgc ctgcagagga cggacagaca gactgcactt ctgcgccgct cagcataagt
     2101 cctagtcctc cgtgtacagc tgagcctcct gtgttaagca cgactcagca agagcaggat
     2161 cagatggagg actctgctgt tccaaaggac actctcaacc cagtagctgt gccagtgtct
     2221 tctccaactg ccacaaagcc atccccggca aacacggctt caccttgcac tagtaacata
     2281 aacccaccga gagctgtggc cctgcaggaa cctcgaaagt taagctatgc tgaagtgtgc
     2341 cagaagcctc ctaaagagcc atctccagtt ctcgtacagc cgctgcggga actccggtct
     2401 aatgcagtat cccccaccag aaatgaagag aacggagctc ccgagaagcc tgttgagaag
     2461 ccgcatgaga aaccagaaac aagggctagt aaggatcatt ctggcttccg aggcaacact
     2521 attcccaggg gagcggctgg aaaaatcagg gaacagagac gccagttcag ccatagggct
     2581 acacctcagg gagtgactcg acgtaatggg aaagagcaat acgtgccacc cagatcacca
     2641 aagtaaaaac aaagcctaca aaaactactc agaagcttct cttcccacta aacttgagcc
     2701 tctgttgaac tgttttggag gggaggaagt agccaggaaa gaatgggaag taagccctaa
     2761 atatgacgga tttttgaaat tgcgagtagg aagagcccaa aattcatctc taaatgattt
     2821 tcaaatgctg gaggattcca atcagtataa atatatataa atatatatat atacacacat
     2881 atatatataa atataatttt tctatttttg tttttgattt taatttgcag gaattttctg
     2941 cctggaatca attttgaggg ttcagattta gcttgggaga gaaaacaaaa aacattatac
     3001 atccttcagt ataggagatg agggagtgag agaaaatatt ttttgaagaa acatttctgt
     3061 aaaaattaga aattactttt tttaatctat ttaaagtttg gcttgaagaa tgctatctct
     3121 gactaaatgg ccttgtgttg cagagtagat gagtggctag ggagtctgtt ctgggtccga
     3181 gtgtgtgcaa aagtgattta agccaaatct gttgtcatgg tagtaaatga tttcaaagct
     3241 gaatgtaata cttgagtaga ttttctttgt agtttggaat ttagttgttt ttgttttttg
     3301 acattactaa tactgtattg tatgaacaag ctataaagct ctgattgtgt gtgaagctgt
     3361 gactaccaat cagtttgata ttcaaggaaa gaatggagat tattcaaaaa aaatattgaa
     3421 aattctgttt tagacctgaa tactggatag gtcaaataga ttgcagaggt ttaaactgcc
     3481 ctgtgacctt tttttttcct ttttaatttt ttttctgatt gtttgttagt ctctgttctt
     3541 agactgtctt ccccccaaaa gcaatatgac taactgttta ctggacagta tgtttcttac
     3601 tactttgacc agtttaatca aattatataa ctattctaag ctacataatg gaatattgaa
     3661 agatttttat tcaattagaa ttttaggtcc caggatggta ctgacctgcc agtaatttat
     3721 ttgtattggt gttaaaaaaa tgaaatagtg cttctggctg tgcgggcata aatctccaac
     3781 cctggcctcc agaggtgtgg caggtggatc tcagtcccag tccatccagg gctctacctc
     3841 tcactagttt ctgtctaaag aaagaaaagg aaaaggaaag aaagatgaaa ccgtgtaact
     3901 gactttttaa atggtctaac ggaaaaattc aaacattaat ttggggaatt ttgttgttta
     3961 caatgtttat catctttctt tggcttgccc ccaaaagtac agtttagcat ttgcagacta
     4021 aaaatagcaa gtcaaggatt tttttttttt tgagataaag cgaaaaagtg gttgaagaaa
     4081 ataaatgcat aatttctcag tgaataaagt tgtagctgtc agacattaaa taggcaaagt
     4141 tacatgctga tatttagaaa acagctcaaa tatgaaaaac catgtttcat taatctgttt
     4201 aagtcaggcc atttttatag ttttatgtag ggtggtttat ttttcttagg gacagtttac
     4261 aatagtaaga gctgtctctc atattaagtg agttacttat gtacaaattg aaactgtaaa
     4321 ttgtaaacac tggaacgcac cattgtgaca taaacatcgt agtaatatat taaaatgaat
     4381 gtaaatggaa gttaaaatta cattactgtg aaacttacct tccagctgtt aagtgtcaga
     4441 gatttgtgtt agtgggtaat tcttaaagag ctttgaaaac actgcataat ccgtgtaacc
     4501 cagaattatt atttctttgt aacttattat tcagcttggc gagcgctttt gatttggcag
     4561 attgataaca tggtatattt acttagttgg aaacaattat ttctacatac ttttaaaaaa
     4621 atatctgcta gatgaaacat acaataaaac tacctgtact aaaatttggg agaactttag
     4681 gtcctttaaa aagtattaat cattattagc aacatctatg ataaaagtgt ttattctggt
     4741 ttacttagaa atgataaaca tttaaagtgt taacatctta tgaatgcagt gaattaatag
     4801 aataaacatt ttgcaaaaaa tcacttgata aggattagaa actttatttt tgcacttaaa
     4861 atgaaaaata actttgtttt ctctaaatgt gtcacagatg tagtttccga tttcttgcta
     4921 ctttgtgtga ctttctgata atccattact acaggttggt ttttttgaac agttcttccc
     4981 ttgaaaccag ggccgtagac agaccccatg agtgttacaa cactgagcta tacctccaac
     5041 ttctaaaggt ctgactgaaa tccaagaaaa atttcctctt aaagcaagta tattcttggt
     5101 tttttttttc tccaaatact gagtgtagag tttttttaaa gcataggatt tttatttcaa
     5161 ttttcctcag tatttctaaa cagctcccat ttgatggggg tgtatgtggg gaggggtaat
     5221 gaatgtgaat gtgtaatata tatttgcagt gtgtatttgg ccgttatttt attgcagcgt
     5281 gtgtaaatga tgcctgtgag ttatgtgaaa ccggcttttc cccatcatca ttactcaagt
     5341 caattgggtg ggtgttcatt gtacttcaac tatttattgg ttctgtagat gggggaattt
     5401 taaacgtcag agtgtgttct tcaccttatg gcttgcttca ttgaaggcca agagtagata
     5461 acgtgatgct tattgtgtcc tacagtagtg catcgtggtt cccactgcat gaagagagca
     5521 gaactcacac aagttcatca tgttgtgctt catagagaag gtgcttagag gggctggcat
     5581 ggcaaaacct tctcatctct gtcttgatga tatctagtct ttaatctgaa tactcactct
     5641 cagttttgcc aaagactcag tggcgtttaa aagcgttcta tctacgttct tacccaccta
     5701 tgttttggag acagatgaaa ccttccaggg ataggggttt gttgtcttac ctgcatatct
     5761 ttacatataa tcaaatgata tgcagaattt taatttattt ttagttccta aagttaaggt
     5821 agcttcaata ttatttcaca ttcctttttc tctttaaatt gccagatttg cttttcaaag
     5881 acttaggggc agaattaagt tagtatcttt cacttagagt aaagagaaca agacaatatt
     5941 atttaagagt taggagcact ttgtctagtt ctgttagtta tgtatggcct taataatcag
     6001 tctcttggct taagtgttca ctggtttcac tttgacacag ttgaacagca ctggggttca
     6061 gttcctgatg cttgtgttgg caatatatat taaccatatt ttaagagtat cattctggct
     6121 ttttatggaa aagatgaaaa tcaaacagta tattcctttt gagggttttt ttaatacgta
     6181 aatatatata aatataatat atgatggatt ttttctaatt ttttatattt ccttacaatt
     6241 tggtgactat tactctaact ttagactctt tggcatatac taagtagcta gtctgggctt
     6301 taaaaatatg catggacatt tcagtttgtt ttagctgaat gaggacattt tgaattctct
     6361 taaaagtcac ctgattatta aataacaatg tttattttta aaactaacaa tgtgttgtgt
     6421 cttattacac attacacagt cctaaaggtg cggctctgat gtctgtgagc tgtgggccaa
     6481 gtattctgtt ttcagttcta tagcacagaa cagtgattag aaatgtaaag agatacccac
     6541 atcaactttc tgtttttgtt tttccaactg attcaggtgt ccattgaatg acgtatctct
     6601 taaatgttgg gggagtggtg tgtcagaacc agttacctgg cttctgtttt gtccatagct
     6661 tagatttgtt ccgttgtcaa aactgtcccc ccccccaaat tgtgtgacac atattcatgc
     6721 ataaactgtt aaaacgagca tctttgtatt tgtattgttt tcaacattgc caaggtgcta
     6781 tgggaaatta aaattacaaa attagaaaaa aataaaatta ttgaaaaaca
//
