LOCUS       XM_006520675            6833 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus La ribonucleoprotein 4 (Larp4), transcript
            variant X2, mRNA.
ACCESSION   XM_006520675
VERSION     XM_006520675.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6833
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..6833
                     /gene="Larp4"
                     /gene_synonym="DXErtd793; DXErtd793e"
                     /note="La ribonucleoprotein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     mRNAs, 24 ESTs, 2569 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 21 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:207214"
                     /db_xref="MGI:MGI:2443114"
     CDS             667..2649
                     /gene="Larp4"
                     /gene_synonym="DXErtd793; DXErtd793e"
                     /codon_start=1
                     /product="la-related protein 4 isoform X1"
                     /protein_id="XP_006520738.1"
                     /db_xref="GeneID:207214"
                     /db_xref="MGI:MGI:2443114"
                     /translation="MCKEYEVMYSPSCETTRNTADVEESADGMILGPEDLSYQLYDVS
                     GESSSAISTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFVPIWTVANMEEIKK
                     LTTNTDLILEVLRSSPMVQVDEKGEKVRPSHKRCIVILREIPETTPVEEVKALFKNEN
                     CPKVISCEFAHNSNWYITFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKN
                     GYRLMDSSMYTQPIQTPTQYPSPVFMQPVYNPQQYSVYSLVPQSWSPSPAPYFETPLA
                     PFPNGSFVNGFSSPGSYKTNAAAMNMGRPFPKNRVKPHFRSSSGSEHSTEGSVSLGDG
                     PLSRSSSRIFLSERHNPTVTGQQEQTYLPKEAPILQMEQNGDFGRGRRTLFRGRRRRD
                     DDRIPRPQPAATEAKAPTPKFDLLATNFPPLPGSSSRVPDELGLENRMSDVVKGVCRE
                     KDSEDVRVSCPVPAEDGQTDCTSAPLSISPSPPCTAEPPVLSTTQQEQDQMEDSAVPK
                     DTLNPVAVPVSSPTATKPSPANTASPCTSNINPPRAVALQEPRKLSYAEVCQKPPKEP
                     SPVLVQPLRELRSNAVSPTRNEENGAPEKPVEKPHEKPETRASKDHSGFRGNTIPRGA
                     AGKIREQRRQFSHRATPQGVTRRNGKEQYVPPRSPK"
ORIGIN      
        1 aggcctcgcg gggccgcctg ggacggagcg agcaacatgt gggagcgcgg gagaagggga
       61 actgcgggcg cggtggggtt ttgtctcgct aactggggag gggcgtgttg ttgttgtttt
      121 tttttttttt taagagagta gaaagctcgc ccgctccccc cacctccgga ccccccaagc
      181 tgcaccaaaa ttttgttggg ttgcgtccgc cggctctgga acgttcgagg ggggtgcggg
      241 gggagaaagc gagctggtgc gaacggcgaa gccccacagg ggtcggaagc cttgaaaggc
      301 accgctctga ccttttgtaa aagttactcg ggctgcggct gcgtggtgcg ggttgattcc
      361 gcgaacctgt tcggggccag ttacaaggaa aattgcaaag gaggagagaa acttaggtga
      421 agccggggtt ttgtggtggt gttggatcgg tggaaatacc gtttctattg gaccgtctac
      481 cgtccgcctg tttgagattt caagcaggtg acatctaaag gcactggttt aaatcctaat
      541 gccaaagtat ggcaagaaat tccttctgga aatccggatg gcactcctgt aactgaaccc
      601 tcttggcatg aaactgcagc cacatctgga tctcaccctg agggccatac agaactttca
      661 gaagatatgt gtaaggaata tgaagtaatg tattctccat cttgtgaaac cacaaggaat
      721 actgcagatg ttgaagagtc agctgatgga atgatcttag gaccggaaga cctgagttac
      781 caactctatg atgtttctgg agaaagcagt tcagcaattt ctacagaaga tttaaaagaa
      841 tgtctgaaaa aacaattgga attctgtttc tcacgagaaa atttatcaaa ggacctttac
      901 ttgatatctc aaatggatag tgatcagttc gtcccaatat ggacggttgc caacatggaa
      961 gaaattaaaa aattgactac aaatacagat ttaattcttg aagtattgag atcttcccct
     1021 atggtacaag ttgatgagaa gggagaaaag gtgagaccaa gtcataagcg atgtattgtg
     1081 attctcagag agattcctga gacaacgcct gtagaggaag tgaaagcttt gtttaaaaat
     1141 gaaaactgcc ccaaagtgat aagctgtgag tttgcgcaca acagcaactg gtacatcact
     1201 ttccagtcag acacagatgc acagcaggct tttaaatact taagagaaga agttaaaaca
     1261 tttcagggca agccaatcat ggcaaggata aaagccatca atacattttt tgctaagaat
     1321 ggttatcgat taatggattc tagtatgtat actcaaccta ttcagactcc tacccaatat
     1381 ccctcaccag tcttcatgca accagtgtat aatcctcagc agtactcagt gtatagtctt
     1441 gtgcctcagt cttggtctcc aagtcctgca ccttactttg aaacaccact ggctcccttt
     1501 cccaatggta gttttgtgaa tggctttagt tcaccaggat cttacaaaac aaatgctgct
     1561 gctatgaata tgggccgacc attcccaaaa aatcgtgtga agcctcattt taggtcatcc
     1621 agtggttcag aacactcaac agagggctcc gtgtcattgg gggatggacc actgagcaga
     1681 tctagttcaa ggatctttct ttctgaacgg cataacccaa cagtaacagg gcagcaggaa
     1741 caaacttatc ttccaaagga ggctcccatt ttacagatgg aacagaatgg ggactttgga
     1801 agaggcaggc gaactctctt cagaggccga aggcgaaggg atgatgacag gatcccaaga
     1861 ccccaacctg cagcaactga agccaaggct ccaactccga agtttgattt gcttgctaca
     1921 aatttccctc ctttacctgg aagctcatcg agagtgccag atgaacttgg tttggagaac
     1981 agaatgtctg atgtcgttaa aggtgtctgc agagaaaagg acagcgagga cgtgcgagtt
     2041 agttgcccag tgcctgcaga ggacggacag acagactgca cttctgcgcc gctcagcata
     2101 agtcctagtc ctccgtgtac agctgagcct cctgtgttaa gcacgactca gcaagagcag
     2161 gatcagatgg aggactctgc tgttccaaag gacactctca acccagtagc tgtgccagtg
     2221 tcttctccaa ctgccacaaa gccatccccg gcaaacacgg cttcaccttg cactagtaac
     2281 ataaacccac cgagagctgt ggccctgcag gaacctcgaa agttaagcta tgctgaagtg
     2341 tgccagaagc ctcctaaaga gccatctcca gttctcgtac agccgctgcg ggaactccgg
     2401 tctaatgcag tatcccccac cagaaatgaa gagaacggag ctcccgagaa gcctgttgag
     2461 aagccgcatg agaaaccaga aacaagggct agtaaggatc attctggctt ccgaggcaac
     2521 actattccca ggggagcggc tggaaaaatc agggaacaga gacgccagtt cagccatagg
     2581 gctacacctc agggagtgac tcgacgtaat gggaaagagc aatacgtgcc acccagatca
     2641 ccaaagtaaa aacaaagcct acaaaaacta ctcagaagct tctcttccca ctaaacttga
     2701 gcctctgttg aactgttttg gaggggagga agtagccagg aaagaatggg aagtaagccc
     2761 taaatatgac ggatttttga aattgcgagt aggaagagcc caaaattcat ctctaaatga
     2821 ttttcaaatg ctggaggatt ccaatcagta taaatatata taaatatata tatatacaca
     2881 catatatata taaatataat ttttctattt ttgtttttga ttttaatttg caggaatttt
     2941 ctgcctggaa tcaattttga gggttcagat ttagcttggg agagaaaaca aaaaacatta
     3001 tacatccttc agtataggag atgagggagt gagagaaaat attttttgaa gaaacatttc
     3061 tgtaaaaatt agaaattact ttttttaatc tatttaaagt ttggcttgaa gaatgctatc
     3121 tctgactaaa tggccttgtg ttgcagagta gatgagtggc tagggagtct gttctgggtc
     3181 cgagtgtgtg caaaagtgat ttaagccaaa tctgttgtca tggtagtaaa tgatttcaaa
     3241 gctgaatgta atacttgagt agattttctt tgtagtttgg aatttagttg tttttgtttt
     3301 ttgacattac taatactgta ttgtatgaac aagctataaa gctctgattg tgtgtgaagc
     3361 tgtgactacc aatcagtttg atattcaagg aaagaatgga gattattcaa aaaaaatatt
     3421 gaaaattctg ttttagacct gaatactgga taggtcaaat agattgcaga ggtttaaact
     3481 gccctgtgac cttttttttt cctttttaat tttttttctg attgtttgtt agtctctgtt
     3541 cttagactgt cttcccccca aaagcaatat gactaactgt ttactggaca gtatgtttct
     3601 tactactttg accagtttaa tcaaattata taactattct aagctacata atggaatatt
     3661 gaaagatttt tattcaatta gaattttagg tcccaggatg gtactgacct gccagtaatt
     3721 tatttgtatt ggtgttaaaa aaatgaaata gtgcttctgg ctgtgcgggc ataaatctcc
     3781 aaccctggcc tccagaggtg tggcaggtgg atctcagtcc cagtccatcc agggctctac
     3841 ctctcactag tttctgtcta aagaaagaaa aggaaaagga aagaaagatg aaaccgtgta
     3901 actgactttt taaatggtct aacggaaaaa ttcaaacatt aatttgggga attttgttgt
     3961 ttacaatgtt tatcatcttt ctttggcttg cccccaaaag tacagtttag catttgcaga
     4021 ctaaaaatag caagtcaagg attttttttt ttttgagata aagcgaaaaa gtggttgaag
     4081 aaaataaatg cataatttct cagtgaataa agttgtagct gtcagacatt aaataggcaa
     4141 agttacatgc tgatatttag aaaacagctc aaatatgaaa aaccatgttt cattaatctg
     4201 tttaagtcag gccattttta tagttttatg tagggtggtt tatttttctt agggacagtt
     4261 tacaatagta agagctgtct ctcatattaa gtgagttact tatgtacaaa ttgaaactgt
     4321 aaattgtaaa cactggaacg caccattgtg acataaacat cgtagtaata tattaaaatg
     4381 aatgtaaatg gaagttaaaa ttacattact gtgaaactta ccttccagct gttaagtgtc
     4441 agagatttgt gttagtgggt aattcttaaa gagctttgaa aacactgcat aatccgtgta
     4501 acccagaatt attatttctt tgtaacttat tattcagctt ggcgagcgct tttgatttgg
     4561 cagattgata acatggtata tttacttagt tggaaacaat tatttctaca tacttttaaa
     4621 aaaatatctg ctagatgaaa catacaataa aactacctgt actaaaattt gggagaactt
     4681 taggtccttt aaaaagtatt aatcattatt agcaacatct atgataaaag tgtttattct
     4741 ggtttactta gaaatgataa acatttaaag tgttaacatc ttatgaatgc agtgaattaa
     4801 tagaataaac attttgcaaa aaatcacttg ataaggatta gaaactttat ttttgcactt
     4861 aaaatgaaaa ataactttgt tttctctaaa tgtgtcacag atgtagtttc cgatttcttg
     4921 ctactttgtg tgactttctg ataatccatt actacaggtt ggtttttttg aacagttctt
     4981 cccttgaaac cagggccgta gacagacccc atgagtgtta caacactgag ctatacctcc
     5041 aacttctaaa ggtctgactg aaatccaaga aaaatttcct cttaaagcaa gtatattctt
     5101 ggtttttttt ttctccaaat actgagtgta gagttttttt aaagcatagg atttttattt
     5161 caattttcct cagtatttct aaacagctcc catttgatgg gggtgtatgt ggggaggggt
     5221 aatgaatgtg aatgtgtaat atatatttgc agtgtgtatt tggccgttat tttattgcag
     5281 cgtgtgtaaa tgatgcctgt gagttatgtg aaaccggctt ttccccatca tcattactca
     5341 agtcaattgg gtgggtgttc attgtacttc aactatttat tggttctgta gatgggggaa
     5401 ttttaaacgt cagagtgtgt tcttcacctt atggcttgct tcattgaagg ccaagagtag
     5461 ataacgtgat gcttattgtg tcctacagta gtgcatcgtg gttcccactg catgaagaga
     5521 gcagaactca cacaagttca tcatgttgtg cttcatagag aaggtgctta gaggggctgg
     5581 catggcaaaa ccttctcatc tctgtcttga tgatatctag tctttaatct gaatactcac
     5641 tctcagtttt gccaaagact cagtggcgtt taaaagcgtt ctatctacgt tcttacccac
     5701 ctatgttttg gagacagatg aaaccttcca gggatagggg tttgttgtct tacctgcata
     5761 tctttacata taatcaaatg atatgcagaa ttttaattta tttttagttc ctaaagttaa
     5821 ggtagcttca atattatttc acattccttt ttctctttaa attgccagat ttgcttttca
     5881 aagacttagg ggcagaatta agttagtatc tttcacttag agtaaagaga acaagacaat
     5941 attatttaag agttaggagc actttgtcta gttctgttag ttatgtatgg ccttaataat
     6001 cagtctcttg gcttaagtgt tcactggttt cactttgaca cagttgaaca gcactggggt
     6061 tcagttcctg atgcttgtgt tggcaatata tattaaccat attttaagag tatcattctg
     6121 gctttttatg gaaaagatga aaatcaaaca gtatattcct tttgagggtt tttttaatac
     6181 gtaaatatat ataaatataa tatatgatgg attttttcta attttttata tttccttaca
     6241 atttggtgac tattactcta actttagact ctttggcata tactaagtag ctagtctggg
     6301 ctttaaaaat atgcatggac atttcagttt gttttagctg aatgaggaca ttttgaattc
     6361 tcttaaaagt cacctgatta ttaaataaca atgtttattt ttaaaactaa caatgtgttg
     6421 tgtcttatta cacattacac agtcctaaag gtgcggctct gatgtctgtg agctgtgggc
     6481 caagtattct gttttcagtt ctatagcaca gaacagtgat tagaaatgta aagagatacc
     6541 cacatcaact ttctgttttt gtttttccaa ctgattcagg tgtccattga atgacgtatc
     6601 tcttaaatgt tgggggagtg gtgtgtcaga accagttacc tggcttctgt tttgtccata
     6661 gcttagattt gttccgttgt caaaactgtc ccccccccca aattgtgtga cacatattca
     6721 tgcataaact gttaaaacga gcatctttgt atttgtattg ttttcaacat tgccaaggtg
     6781 ctatgggaaa ttaaaattac aaaattagaa aaaaataaaa ttattgaaaa aca
//
