LOCUS       NM_026038               1705 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus L-3-hydroxyproline dehydratase (trans-) (L3hypdh),
            mRNA.
ACCESSION   NM_026038
VERSION     NM_026038.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1705)
  AUTHORS   Liu,J., Liu,L., Zeng,S., Meng,X., Lei,N., Yang,H., Li,R., Mu,X. and
            Guo,X.
  TITLE     Inhibition of EV71 replication by an interferon-stimulated gene
            product L3HYPDH
  JOURNAL   Virus Res 342, 199336 (2024)
   PUBMED   38342315
  REMARK    GeneRIF: Inhibition of EV71 replication by an interferon-stimulated
            gene product L3HYPDH.
REFERENCE   2  (bases 1 to 1705)
  AUTHORS   Visser,W.F., Verhoeven-Duif,N.M. and de Koning,T.J.
  TITLE     Identification of a human trans-3-hydroxy-L-proline dehydratase,
            the first characterized member of a novel family of proline
            racemase-like enzymes
  JOURNAL   J Biol Chem 287 (26), 21654-21662 (2012)
   PUBMED   22528483
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK018449.1.
            
            On Apr 5, 2007 this sequence version replaced NM_026038.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK018449.1, BC004753.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1705              AK018449.1         2-1706
FEATURES             Location/Qualifiers
     source          1..1705
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 30.2 cM"
     gene            1..1705
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /note="L-3-hydroxyproline dehydratase (trans-)"
                     /db_xref="GeneID:67217"
                     /db_xref="MGI:MGI:1914467"
     exon            1..665
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            666..835
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            836..958
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            959..1096
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1705
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1623..1628
                     /regulatory_class="polyA_signal_sequence"
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1642
                     /gene="L3hypdh"
                     /gene_synonym="2810055F11Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtctaagatt ccggacgctg gtcgctgggt gatctctgct cgccggcttg gccctgagat
       61 tgccaccggt tctgcgcgtt ctcccgttgg gtttggcgct ttctccctgc ttggagagag
      121 caccaccgcg ctgtgcggca gtccctggac gcagacaatg gaggcggcgc tggcagtgac
      181 ccggctgccc ccaaacgacc cgaggacgcc agcactgtcg gtggtggaca tgcacacagg
      241 cggcgagcct ctgcgcatcg tgcacgccgg gtgtccggag gtggcagggc ccacgttgct
      301 ggccaagcgt cgctacatgc gtcaacacct cgactacatc cggcggcggc tcgtgttcga
      361 gccccgcggc caccgggaca tgtacggggc catcctggtg cccagtgagc tgccagacgc
      421 acacctaggc gtcctgttct tgcacaacga aggctacagc tccatgtgcg gtcacgcggt
      481 gctagcgctg ggccgcttcg cgctcgactt tggactggtg cccgctcccc caaaaggcgc
      541 ccgggaggct caggtcaaca tccactgccc gtgtggtctg gtgaccgcct tcgtagagtg
      601 tgaaggtggc cgcagttgcg gccctgtgcg cttccacagc gtcccagcct ttgtcctggc
      661 ctcagacctc acagtggatg ttcctggcca tggaaaggtg ctggtggaca ttgcatatgg
      721 tggggcattt tatgcgtttg ttagtgcaga aaaattagga cttgatgtgt gttctgcgaa
      781 gacgagggac cttgtggatg cggcaagtgc attgacagga gcagtgaaag cacagtttaa
      841 aatcaaccat cctgagagtg aagaccttgg ttttttgtat ggatccatct tgacggatgg
      901 aaaagatgct tatagtgagg aggccaccac caacatctgc gtgtttgccg atgaacaggt
      961 tgacagaagc cccaccggct cgggagtgac agccagaatt gctctgcagt atcataaggg
     1021 gctcctgcag ctgaaccaga ccagagcctt caaaagcagc gcaactggct cggtgttcac
     1081 aggctgtgcc gtgagggaag caaagtgtgg agatttcaaa gctgtcatag tggaagttgc
     1141 aggacaagcc cattacacag ggacagcaaa cttgacagtg gaagatggtg acccactaag
     1201 ggatggcttt cttctcaagt gacttttttt tttcataagt tttaaaggtt ttgcttagaa
     1261 agtaattacc tttaaattgt gttttctctg tattatgtgc aaaccagtat ccagttacac
     1321 ttacaggcta atttttatac tttctaaaaa gtatgtttag tatactgagt ctaaatgtaa
     1381 ggtattatac ttcctatttg tcaacctttt gagcataaat gtcgctaatg gggcaaacag
     1441 agtgccaaga atccggaaac ttttaaagca ttagtataca aggcaaaatt aaagcacagt
     1501 tacttaatct atgctatgga aatgataata cttgtaagtt ttttttgatt gctagcttca
     1561 gctataaacc acacaatagt aaatgttgtg agtttgttat tttaatgttc cagtttgagt
     1621 aaaataaagg catctgtaag tatcatgctc atagaggtgg gttattataa tgttctcaac
     1681 acttgccata aataattttg gaagg
//
