LOCUS       NM_001099774             763 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus keratin associated protein 17-1 (Krtap17-1), mRNA.
ACCESSION   NM_001099774 XM_001472367 XM_001477954
VERSION     NM_001099774.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 763)
  AUTHORS   Kiso,M., Tanaka,S., Saba,R., Matsuda,S., Shimizu,A., Ohyama,M.,
            Okano,H.J., Shiroishi,T., Okano,H. and Saga,Y.
  TITLE     The disruption of Sox21-mediated hair shaft cuticle differentiation
            causes cyclic alopecia in mice
  JOURNAL   Proc Natl Acad Sci U S A 106 (23), 9292-9297 (2009)
   PUBMED   19470461
REFERENCE   4  (bases 1 to 763)
  AUTHORS   Wu,D.D., Irwin,D.M. and Zhang,Y.P.
  TITLE     Molecular evolution of the keratin associated protein gene family
            in mammals, role in the evolution of mammalian hair
  JOURNAL   BMC Evol Biol 8, 241 (2008)
   PUBMED   18721477
  REMARK    Erratum:[BMC Evol Biol. 2009;9:213]
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL592545.10.
            
            On Feb 8, 2013 this sequence version replaced NM_001099774.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AK020698.1, CK791701.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-763               AL592545.10        66695-67457         c
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 63.34 cM"
     gene            1..763
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /note="keratin associated protein 17-1"
                     /db_xref="GeneID:77914"
                     /db_xref="MGI:MGI:1925164"
     exon            1..763
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..385
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /codon_start=1
                     /product="keratin-associated protein 17-1"
                     /protein_id="NP_001093244.1"
                     /db_xref="CCDS:CCDS36330.1"
                     /db_xref="GeneID:77914"
                     /db_xref="MGI:MGI:1925164"
                     /translation="MGCCPGDCLNCCSQEQDCCEECCCQQGCCGCCGCCGSCCGCGGS
                     SCGGGCCGSGCGGCGGCGSSCCGSGCGGGCGGCGGGCCGGSGCCGGGGGCCGPVCCQP
                     TPVCETK"
     regulatory      578..583
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      599
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /note="major polyA site"
     regulatory      736..741
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /note="hexamer: AATAAA"
     polyA_site      763
                     /gene="Krtap17-1"
                     /gene_synonym="A030006P16Rik"
                     /note="major polyA site"
ORIGIN      
        1 agacctaggg gaagctcggc cgcgttcctg acctgagacc tgaccggctg ggaccatggg
       61 atgctgcccg ggagactgcc tcaattgctg ctcccaggaa caggactgct gtgaggagtg
      121 ttgctgccag cagggctgct gcggctgctg tggctgttgt ggctcctgct gtggctgcgg
      181 aggttctagc tgcggaggag gctgctgcgg gtctggctgc gggggatgcg gaggctgcgg
      241 gtctagctgc tgcggatctg gctgcggagg aggctgcggg ggctgtggag gcggctgctg
      301 tggcggctcc ggatgctgcg gtggtggcgg cgggtgctgt ggtccagtgt gctgtcagcc
      361 cacacctgtg tgtgagacaa aatgaagacc ttcccccctc taactgagac agtgttgggg
      421 acagcctccg tccagtccac tccagatgga gacctcctca tctcctgact cgtttgcacc
      481 tccaagacag cgacatgcct ctcctgttat ttctgatagg agagcttgcc ctggggtcta
      541 aggcactcag ggccaaagag ccatttcctg gcaagaaatt aaaagctggg ttccaatgag
      601 gtggtcacca agttcaatgt tcctgacttc atttacatga agttacacgc ctcgcagcta
      661 tgaggcattc tcttactctt tggacctctt ggtccatccc agttttctgc tcctttgaaa
      721 ctttgtcaat cttttaataa attcaagcat gctggctacc cta
//
