LOCUS       NM_025487                903 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus keratin 88 (Krt88), mRNA.
ACCESSION   NM_025487
VERSION     NM_025487.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 903)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CN841812.1, BC048463.1 and BB019987.1.
            
            On Dec 12, 2009 this sequence version replaced NM_025487.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK005855.1, BC048463.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                CN841812.1         5-27
            24-897              BC048463.1         1-874
            898-903             BB019987.1         245-250
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 56.9 cM"
     gene            1..903
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /note="keratin 88"
                     /db_xref="GeneID:66322"
                     /db_xref="MGI:MGI:1913572"
     exon            1..110
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            111..215
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            216..433
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            434..465
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            466..903
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      878..883
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /note="hexamer: AATAAA"
     polyA_site      901
                     /gene="Krt88"
                     /gene_synonym="1700011A15Rik"
                     /note="major polyA site"
ORIGIN      
        1 agcaggcagg agggggtgtg cccagagatg aggattttgt gagtgcctta aactggagct
       61 aggctgtggt gctcgagagg tttggaggca tcaggaggtc ctttaccatg tgtgagaaga
      121 tgaaggccac tgtgcagaaa tgtgtgcaga cccctaggca cagcaaggag gccctgaata
      181 ggctcaacca ggctatccag cagctgaaga tggagccttg tgaactacag aaaagccaag
      241 acttggaggc catgccggat gcggcctcag gcagcgctaa gggcagactg gcctggctgg
      301 aggctgccct gcagcgagcc aagcaggaca tggctcggca gctacgtgag taccaggagc
      361 tcatgatcgt caaactgggc ctggactttg agatcgctac ctaccgcagg ctgctggagg
      421 gtgaggagca gaggcttggt ctgggacttg gggcagggag tgtggctccc ggcggtgacg
      481 tcactggaga caggtcctcc ctaagggcac ccggagtcag ttcctgtggc ctgaacatga
      541 gcgccccaag tggtggctgc gctctctgca gctctgcggg ctgtgttgga ggctttggct
      601 gccttggctc ccgtgaatgt tgaacccctc cctccggaga agactagaaa ctggcgcttc
      661 tgcccaaaga cttggtcctc ttgtctcaga ttcccttgcc cacagagctg gccctcttct
      721 cccttccccc ttttgcccct cacttggaac tagacgggac tctggtgtgt catcttgtag
      781 acatggcctg tggcttacct gaaccttgca ttctgcccct ctgactggct ctattctctc
      841 tctctttctc tctctctctt tttcaggctt gccctttaat aaaacattct gtggtggcta
      901 atc
//
