LOCUS       NM_001039061            2363 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Mus musculus kelch-like 15 (Klhl15), transcript variant 1, mRNA.
ACCESSION   NM_001039061 XM_982015
VERSION     NM_001039061.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK081546.1, AK078112.1, AK133055.1 and AL646049.14.
            
            On Aug 25, 2006 this sequence version replaced XM_982015.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK078112.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-60                AK081546.1         5-64
            61-1564             AK078112.1         2-1505
            1565-1658           AK133055.1         1236-1329
            1659-1659           AL646049.14        65094-65094
            1660-2363           AK133055.1         1331-2034
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 41.53 cM"
     gene            1..2363
                     /gene="Klhl15"
                     /gene_synonym="6330500C13Rik"
                     /note="kelch-like 15"
                     /db_xref="GeneID:236904"
                     /db_xref="MGI:MGI:1923400"
     exon            1..491
                     /gene="Klhl15"
                     /gene_synonym="6330500C13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            492..1203
                     /gene="Klhl15"
                     /gene_synonym="6330500C13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             499..2313
                     /gene="Klhl15"
                     /gene_synonym="6330500C13Rik"
                     /note="isoform a is encoded by transcript variant 1;
                     kelch-like protein 15"
                     /codon_start=1
                     /product="kelch-like protein 15 isoform a"
                     /protein_id="NP_001034150.1"
                     /db_xref="CCDS:CCDS30278.1"
                     /db_xref="GeneID:236904"
                     /db_xref="MGI:MGI:1923400"
                     /translation="MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQA
                     HKALLATQSDYFRIMFTADMRERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVH
                     EILQAAMYVQLIEVVKFCCSFLLAKICLENCAEIMRLLDDFGVNIEGVREKLDAFLLD
                     NFVPLMSRPDFLSYLSFEKLMSYLDNDHLSRFPEIELYEAVQSWLRHDRRRWRHTDTI
                     IQNIRFCLMTPSSVFEKVKTSEFYRYSRQLRYEVDQALNYFQNVHQQPLLDMKSSRIR
                     SAKPQTTVFRGMIGHSMVNSKILLLKKPRVWWELEGPQVPLRPDCLAIVNNFVFLLGG
                     EELGPDGEFHASSKVFRYDPRQNSWLRMADMSVPRSEFAVGVIGKFIYAVAGRTRDET
                     FYSTERYDITNDKWEFVDPYPVNKYGHEGTVLNNKLFITGGITSSSTSKQVCVFDPSK
                     EGTIEQRTRRTQVVTNCWENKSKMNYARCFHKMISYNGKLYVFGGVCVILRASFESQG
                     CPSTEVYNPDTDQWTILASMPIGRSGHGVTVLDKQIMVLGGLCYNGHYSDSILTFDPD
                     ENKWKEDEYPRMPCKLDGLQVCNLHFPDYVLDEVRRCN"
     exon            1204..2363
                     /gene="Klhl15"
                     /gene_synonym="6330500C13Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttcccgctt tcctccaccc ccggcgtggg tgatcccgag gctccgcgcg ctttgggggc
       61 agaaacccgg agacgccgtc gtgtatgtgg ttcccgctgg cgtttctgtt gccctcggcc
      121 ccctcagctg tcccccagtt ggtggtcctg agtcgcctct ccagccgagc cccgtgcagt
      181 gccgcgacat cccccggtat tggcgaggct gggccccggc cccgacgccg cgcgcgtcac
      241 gcctagccca actgtttgga ctcgccactc aaccgctgtc ttctttccca ggactgtttc
      301 tcggggggcc tcgggcttgc gagctcgccc ggcgccggag cgctccggcc cggccaggga
      361 gcggcccctt gtagaggttc gaggagctat cgcggtccat cccggcgccc gaccctccca
      421 ccgttcggcc actggcccac ttcttcctga tgcagactgc cgtccactag aggctggaca
      481 ggacccccga ggtgattcat ggcaggggac gtggaaggat tctgttcctc catccatgac
      541 accagtgtct ctgctgggtt cagagcactg tatgaggagg gattgcttct cgatgtcact
      601 ctggttattg aagaccatca gttccaggcc cataaagctc tcttggccac ccagagtgat
      661 tacttcagaa ttatgttcac agcagacatg agggaacgag atcaggacaa aattcatttg
      721 aaaggtctaa cagctactgg tttcagccac gttcttcagt ttatgtatta tggaactata
      781 gaactaagta tgaacactgt acatgaaatc cttcaggcag caatgtatgt tcagcttata
      841 gaagtggtga aattctgctg ctcctttctc ttagccaaaa tctgcttaga aaattgtgcg
      901 gaaattatga gactgttaga tgatttcggt gttaacatcg agggagtcag ggagaagctg
      961 gatgccttcc tgctagacaa cttcgtgcca ctaatgtcca ggcctgactt tttgtcttat
     1021 ctgagcttcg agaagctcat gtcttatttg gataatgacc atctgagcag gtttccagaa
     1081 attgagctgt acgaggctgt gcagtcttgg ctgcgacatg atagacgacg gtggagacac
     1141 acagatacca tcattcagaa catcaggttt tgtctgatga ctccatccag cgtctttgag
     1201 aaggttaaaa catcagaatt ttatagatac tcccgacagc tccgatatga agttgaccaa
     1261 gcattgaatt acttccaaaa tgttcaccag cagcccttgt tggacatgaa atcaagccgt
     1321 attcgttctg ccaaacccca aactacagta ttccgaggaa tgattggaca tagcatggtt
     1381 aatagcaaaa tacttctgtt aaaaaaacca agagtctggt gggaactgga gggcccccaa
     1441 gtacctctaa ggccagactg ccttgctatt gtcaataatt ttgtattcct gctaggtgga
     1501 gaagaactgg gccctgatgg tgaattccat gcctcttcga aagtgttcag gtatgatcca
     1561 agacaaaatt cttggctgcg tatggcagac atgtctgtac cccgttcaga atttgctgtt
     1621 ggtgttattg gaaagtttat ttatgctgta gcaggcagaa caagagatga aactttctac
     1681 tcaacagaaa gatatgatat cactaatgat aaatgggaat ttgtagatcc ttatccagtt
     1741 aacaaatatg gacatgaggg gacagtgctc aataacaagt tgtttatcac tggaggaatt
     1801 acttcatctt ccacatctaa acaggtgtgt gtgtttgacc ccagtaaaga agggactata
     1861 gagcagcgga ccaggagaac gcaagtagtc accaactgct gggagaataa gagcaagatg
     1921 aattatgcca gatgttttca caagatgatc tcttacaacg gcaagcttta tgtctttggt
     1981 ggtgtctgtg tgatcttgag ggcctctttt gaatctcagg gctgcccttc cacagaggtg
     2041 tacaacccag ataccgatca gtggaccatc ttggcctcca tgccaattgg tagaagtggt
     2101 catggtgtga ctgtgctgga caaacagata atggtccttg gaggcctttg ttataatggt
     2161 cattacagtg attccattct cacctttgac ccagatgaaa ataagtggaa agaagatgag
     2221 taccctcgga tgccctgcaa gctggatggt ttacaggtgt gcaacctaca ttttccggac
     2281 tatgtactgg atgaggttag gcgttgcaac tgatgacatt tcttcctaaa aaggaaaagg
     2341 caaataaagc atttgtgata cag
//
