LOCUS       NM_001033039            1555 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus kelch domain containing 9 (Klhdc9), mRNA.
ACCESSION   NM_001033039
VERSION     NM_001033039.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Eddleston,J., Murdoch,J.N., Copp,A.J. and Stanier,P.
  TITLE     Physical and transcriptional map of a 3-Mb region of mouse
            chromosome 1 containing the gene for the neural tube defect mutant
            loop-tail (Lp)
  JOURNAL   Genomics 56 (2), 149-159 (1999)
   PUBMED   10051400
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK140290.1.
            
            On Apr 6, 2007 this sequence version replaced NM_001033039.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK140290.1, BC141196.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1555              AK140290.1         2-1556
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 79.36 cM"
     gene            1..1555
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /note="kelch domain containing 9"
                     /db_xref="GeneID:68874"
                     /db_xref="MGI:MGI:1916124"
     exon            1..664
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /inference="alignment:Splign:2.1.0"
     CDS             138..1190
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /codon_start=1
                     /product="kelch domain-containing protein 9"
                     /protein_id="NP_001028211.1"
                     /db_xref="CCDS:CCDS35776.1"
                     /db_xref="GeneID:68874"
                     /db_xref="MGI:MGI:1916124"
                     /translation="MAGVQTLGRARGSTWTWRPVARDVLLARAFHSCTELEGRFYLVG
                     GLLEGGARVPSNDTVIFDPAVGQAVRLVARGSPLRSHHDAALVGGRWLCVVGGWDGSR
                     RLSTVAALDTEREVWEAWAANPGNCPPAGLSSHTCTRLSDGELRVSGREGGTHTQRRY
                     GSIYTLKLDHRTRTYCYKEEGCHTTSRSGHCAALLPTAGPHPGHQLLLFGGCNSVGPE
                     VAGQWSPGKIKEEQPVAPHLREQLARLVSSGQGLQQGPQSLRHHSCSVVGPFAVLFGG
                     ETLTRARDTICNDLYIYDTRKSPPLWFHFPSTDRGLKRVGHRTCLWNDQLYLVGGFGE
                     DGRTASPQVCILEFFI"
     exon            665..824
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /inference="alignment:Splign:2.1.0"
     exon            825..1023
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /inference="alignment:Splign:2.1.0"
     exon            1024..1555
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1271..1276
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /note="hexamer: ATTAAA"
     polyA_site      1289
                     /gene="Klhdc9"
                     /gene_synonym="1190002J23Rik; ESTM31"
                     /note="major polyA site"
ORIGIN      
        1 ggtggagaga aggggtggtt tgggtgaaga cctgtgctgt tattggaggg gaagctagtc
       61 tatgcttgga agtgctgggc ccttcgtgaa ggagtgcgac ccgaagtgac cgagctgctc
      121 tccccttccc ttggcccatg gctggggtgc agaccctcgg tcgagcaaga ggctcaacct
      181 ggacctggag gccagtggcg cgagacgtgc ttctggctcg tgccttccat tcatgcacgg
      241 aactggaagg acggttctat ctggtagggg gtctcctaga aggtggtgca agagtgccca
      301 gcaacgacac tgtgatcttt gacccagctg taggccaagc ggtgcgactg gtagcccgag
      361 gtagtcccct tcgcagccac cacgacgcgg cactggtggg aggtcgttgg ctctgcgtgg
      421 tgggtggctg ggacgggtca cgtcgcttat ccacggtggc cgcgctggac acggagagag
      481 aggtgtggga agcatgggct gcgaaccctg gcaactgccc tcctgctggc ctcagcagcc
      541 acacctgcac tcgcctctca gacggggagc tgcgagtgtc tggcagagag ggtggtaccc
      601 acactcagcg acgctacgga agcatctaca cgttaaagtt ggaccacagg acccgaactt
      661 attgctacaa agaagaaggc tgccacacaa cctcacgatc aggccactgt gctgccctgc
      721 tgccaactgc tgggccgcac ccgggtcatc agcttttgct ctttgggggc tgcaactcag
      781 ttggaccgga ggtagcaggg caatggagcc ctgggaaaat caaggaggaa caaccagttg
      841 cccctcattt gagggaacag cttgcaaggc ttgtgagcag tgggcaggga ctgcagcaag
      901 gaccccagag cctgcgccat cattcctgtt cagtggtggg acccttcgct gtactatttg
      961 gcggagaaac tctgaccaga gctagagata cgatctgcaa tgatctctac atctacgata
     1021 cccgcaagtc tccgcctctg tggttccact tccccagtac agaccgtgga ctgaagcgcg
     1081 tgggccatcg gacttgcctt tggaatgacc agctttattt ggttgggggt tttggtgagg
     1141 acggcaggac agctagccca caggtttgca tcctggaatt cttcatctaa agaacagcag
     1201 ggaggcactc tgtgttgtgg caaacctaca aagcgatctc atcagagcta ttgccctact
     1261 tcaaatactt attaaatttc aatccgagag ttttgtctct gaatccttta gaagatttat
     1321 acattttact tatataagtg ccctatttgc atgtacacct ttgtgccaga agagggcatc
     1381 agaccccatt atagatggtt gtgagccacc atgtggttgt tggggataat aaaacagatg
     1441 ccccctggaa gagcagacag agctcttcac tgttgagcca tctgagccat ctctccagcc
     1501 ctctgaatcc gttttagaag agcatcaaat aaacagatta ctttatttgc aaagg
//
