LOCUS       NM_001113187            2249 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus KH domain containing 1B (Khdc1b), mRNA.
ACCESSION   NM_001113187 XR_031792 XR_031927 XR_035202
VERSION     NM_001113187.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Yu,C., Ji,S.Y., Dang,Y.J., Sha,Q.Q., Yuan,Y.F., Zhou,J.J.,
            Yan,L.Y., Qiao,J., Tang,F. and Fan,H.Y.
  TITLE     Oocyte-expressed yes-associated protein is a key activator of the
            early zygotic genome in mouse
  JOURNAL   Cell Res 26 (3), 275-287 (2016)
   PUBMED   26902285
REFERENCE   2  (bases 1 to 2249)
  AUTHORS   Cai,C., Tamai,K. and Molyneaux,K.
  TITLE     KHDC1B is a novel CPEB binding partner specifically expressed in
            mouse oocytes and early embryos
  JOURNAL   Mol Biol Cell 21 (18), 3137-3148 (2010)
   PUBMED   20668163
  REMARK    GeneRIF: Data suggest that KHDC1B, via its interaction with mCEPB1,
            may regulate translation of mRNA targets required for oocyte
            maturation.
REFERENCE   3  (bases 1 to 2249)
  AUTHORS   Pierre,A., Gautier,M., Callebaut,I., Bontoux,M., Jeanpierre,E.,
            Pontarotti,P. and Monget,P.
  TITLE     Atypical structure and phylogenomic evolution of the new eutherian
            oocyte- and embryo-expressed KHDC1/DPPA5/ECAT1/OOEP gene family
  JOURNAL   Genomics 90 (5), 583-594 (2007)
   PUBMED   17913455
REFERENCE   4  (bases 1 to 2249)
  AUTHORS   Rajpal,A., Cho,Y.A., Yelent,B., Koza-Taylor,P.H., Li,D., Chen,E.,
            Whang,M., Kang,C., Turi,T.G. and Winoto,A.
  TITLE     Transcriptional activation of known and novel apoptotic pathways by
            Nur77 orphan steroid receptor
  JOURNAL   EMBO J 22 (24), 6526-6536 (2003)
   PUBMED   14657025
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK139842.1,
            BG081161.2 and CJ203626.1.
            
            On or before Dec 29, 2007 this sequence version replaced
            XR_031792.1, XR_035202.1, XR_031927.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK139842.1, DN154718.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-750               AK139842.1         1-750
            751-794             AK139842.1         752-795
            795-863             BG081161.2         521-589
            864-2234            AK139842.1         848-2218
            2235-2249           CJ203626.1         360-374
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 6.64 cM"
     gene            1..2249
                     /gene="Khdc1b"
                     /gene_synonym="Khdc1; Khdc1c"
                     /note="KH domain containing 1B"
                     /db_xref="GeneID:98582"
                     /db_xref="MGI:MGI:2138477"
     exon            1..481
                     /gene="Khdc1b"
                     /gene_synonym="Khdc1; Khdc1c"
                     /inference="alignment:Splign:2.1.0"
     CDS             382..762
                     /gene="Khdc1b"
                     /gene_synonym="Khdc1; Khdc1c"
                     /note="oocyte-specific Khdc1; KH homology domain
                     containing 1; KH homology domain containing 1B; peptidase
                     M20 domain containing 2"
                     /codon_start=1
                     /product="KH homology domain-containing protein 1B"
                     /protein_id="NP_001106658.1"
                     /db_xref="CCDS:CCDS48229.1"
                     /db_xref="GeneID:98582"
                     /db_xref="MGI:MGI:2138477"
                     /translation="MSDLRRKGWWNVPDYFYSPLVFDMEEDQEDYIFGPDDEYLHTLE
                     VHSNTLIQLERWFSPTGQTRVTVVGPLKARLWVMDMIRKVGSKNTLDKIKGKLMLLHI
                     RSHPLTDQDLQIHLISGSSCWFPD"
     exon            482..664
                     /gene="Khdc1b"
                     /gene_synonym="Khdc1; Khdc1c"
                     /inference="alignment:Splign:2.1.0"
     exon            665..2247
                     /gene="Khdc1b"
                     /gene_synonym="Khdc1; Khdc1c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acatgaggtc ctgtttcaag gagggaaaac catgtagaga tcttcctcct ccagctcatt
       61 cattcctcac cagcctccag ggacttttct actccatggt ctgtagatct gctccagaaa
      121 ttttgacatt ataaagaaga aaattttagg tgtttggacc ttcaagtgaa gactcaacat
      181 attatctaag agtaatcaca gggagtttcg aagagagaag ctagaggcat ttgagtctcc
      241 tccctaaggt gggtcaaagc ttgctccttg ggagtgagca tacatatata gctcctaaag
      301 ccagaattgc ctttctacgg agcaaccagc tgtctggaat tgctttgttc taaggcaagt
      361 aggcgtctac aggagacagg aatgagtgac ctccgcagga agggatggtg gaatgtgcct
      421 gactacttct acagcccact ggtgtttgac atggaagagg accaggaaga ctacatattt
      481 ggccctgatg atgaatacct tcacaccctg gaggtccaca gcaacaccct catccagctg
      541 gagagatggt tctcacccac aggccaaacc cgagtcactg tggtggggcc acttaaggca
      601 aggctgtggg tgatggacat gatcagaaaa gtggggagta agaacactct cgataaaatt
      661 aaaggcaagt tgatgctact ccatatccgg agtcatcctc tgacggatca agacctgcag
      721 attcatctga tatcagggag cagttgttgg ttccctgatt gagtgattgg acttctgtgt
      781 tagttcttag ttacttgacg tttcctttga cagttgtttg gggtttctgt tagaatttct
      841 tgtattcata atttcacaga tcttctttgg taatttcttt gggaaatcag ccagtggggg
      901 taggggaagg aggttcttca ttaacctttg aaaaaacagg tgaaagatag gtaagtttga
      961 tttggaggac cttactggca atttcaggca gtgtaagatt acacacttct aggtgtaaga
     1021 ttctggcaaa ggtatctaat gaaacacatt gctgtgacac gtaatgcctt tgatgttggt
     1081 ctcttttctt tgtctacact aatccaaagg agctgtggaa tctctgggca aggcagtctc
     1141 caagggctgg gaagtgtaca ttgtctcccg agagttatta ttagggaggt tggagtggaa
     1201 acaagatata aattgcttct ctcacatcaa cagcaccttt tgctatgtta gaccaggagg
     1261 gtctaattaa aggaaattgt acttaaaagt gcaggggtgc ctagctagac tactgacccc
     1321 caacctccag ccactttagg gtttcagaga acagcctctc actggttttg aggtttctta
     1381 ttggaaaggg ttagggttga tagaatacag ctgtggagat tattggctgt tagcacctgg
     1441 gtagaagagt ggggaactct ggtctcaagg ctgcctatgg ggtagataag tggaaaaaga
     1501 gttatcacct gtgtcttgga gtttagcaag gcaaagaggt aggtgtacat cagtgggcta
     1561 caagttttgc atattctgga aactgtggtt tatatcatac attaggctct ggaaagaaac
     1621 ttattcttgt aaggtattga gatctaatga caatgaatga tatgtggatc ctgatttggg
     1681 ctctcaactg atttgagtgg aaaacattgg ttctgcagag aactttcagt agacttaaga
     1741 ttatcctagt cttaaacact gaccagtgag aggtgagaag attcagggtc ctgatggaga
     1801 caagttttaa gtggacagga aggtcacctg gtgagcatga ccatgagcct tcagcactgt
     1861 ccctgaagcc tgaagttggg ggagggttaa aacatgcttt ctgagatcta taaattgaca
     1921 atcaagggta ttggaattcc ttaaacatgt tctcttcaca gggctcttca gccacttgtg
     1981 tcttaccagg acaccatttc cctattctag gagagggagc agtgtcctga gcagagtatt
     2041 accacagggg ggtgtgctga gatggttgat atacactggt ctgaagctac caacatagtt
     2101 ccctactttc cttgatcagt aattaaataa tttgattggt ttcagaatag taactgaacc
     2161 tgacacactc catttttttg tatgttgatt gtttggtttc tttctttctt tggaacatta
     2221 aagtttgttt tatttatctt tgttttaaa
//
