LOCUS       NM_001159864            2615 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus potassium channel tetramerisation domain containing 18
            (Kctd18), transcript variant 1, mRNA.
ACCESSION   NM_001159864
VERSION     NM_001159864.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Mu X, Zhao S, Pershad R, Hsieh TF, Scarpa A, Wang SW, White RA,
            Beremand PD, Thomas TL, Gan L and Klein WH.
  TITLE     Gene expression in the developing mouse retina by EST sequencing
            and microarray analysis
  JOURNAL   Nucleic Acids Res 29 (24), 4983-4993 (2001)
   PUBMED   11812828
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY080515.1, BY736102.1, AK132699.1, AC110735.6 and BB678909.1.
            
            [WARNING] On Mar 21, 2024 this sequence was replaced by
            NM_001159864.2.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK132699.1, SRR7652917.962362.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849382, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-367               BY080515.1         2-368
            368-622             BY736102.1         340-594
            623-764             AK132699.1         592-733
            765-774             AC110735.6         107075-107084       c
            775-2456            AK132699.1         743-2424
            2457-2615           BB678909.1         288-446
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 28.86 cM"
     gene            1..2615
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /note="potassium channel tetramerisation domain containing
                     18"
                     /db_xref="GeneID:51960"
                     /db_xref="MGI:MGI:3603813"
     exon            1..64
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            65..291
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1388
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="BTB/POZ domain-containing protein KCTD18 isoform
                     1"
                     /protein_id="NP_001153336.1"
                     /db_xref="CCDS:CCDS48269.1"
                     /db_xref="GeneID:51960"
                     /db_xref="MGI:MGI:3603813"
                     /translation="MLKAELQASKGAMAGHEAEDVLDILRLNVGGCIYTARRESLCRF
                     KDSMLASMFSGRFPLKTDESGACIINRDGHLFKYILDYLHGEVQTPSDEQTRAALQEE
                     ADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDSYGLVCNKPTVWVLHYLN
                     TSGASCESRIIGVYATKTDGTDAIDKQLGGRIHSKSIFKREAGNNVQYIWSYYSVAEL
                     KKMMDAFDAWEGKGVSYWRVPHELIECWTLEERPLHGSLRHMAPIRKRRLIALREEDE
                     GVNCKTGPKPVRFLGPSTSTQIKVKNSASVRVSPANAAQISSQATANRSHRGSCGKAA
                     QCSVATGASGHAPASPDAQSSENQATHPPPAKVLLSEKKSPPPRVIKLRRTPLRGGPS
                     LPTASAGGQACFPQPPSLEASSSLGVQMETRKDQPDG"
     exon            292..503
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            504..697
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            698..792
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            793..895
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            896..2615
                     /gene="Kctd18"
                     /gene_synonym="4932411A20Rik; 6530404F10Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggcttacttc cgcgtccggg cccggctgcg ttgggcggct gcgcccaggg actggcggcc
       61 gcagaggtct gggactgcta ctgtttcaaa gtttctgaat gcttaaggca gaacttcagg
      121 catcgaaggg agcaatggca ggccatgaag cagaagacgt gctagatatc cttcggctga
      181 atgtgggtgg ctgcatctac acagcccggc gagagtcttt gtgccgcttt aaggattcta
      241 tgctggcatc tatgtttagt ggtcgtttcc ctctaaaaac agatgaatct ggggcgtgca
      301 ttattaaccg tgatggacat ctattcaaat acattttgga ctacctgcac ggggaggtgc
      361 agaccccctc ggatgagcag acgcgagctg ccctgcagga ggaggctgac tactttggca
      421 tcccttaccc gtacagcttg tctgaccact tggccaatga gatggagaca tattctttaa
      481 ggtcaaatat agaacttaaa aaggctttaa cagacttctg tgattcctat ggcttagttt
      541 gcaataaacc aacagtttgg gttctccact atcttaacac atctggtgca agctgtgaga
      601 gtagaattat tggtgtctat gctacaaaaa ctgacgggac agatgccatt gataagcagc
      661 tgggaggaag gattcatagt aaaagcattt tcaaaagaga ggcggggaac aacgttcagt
      721 acatttggag ctattactca gtagccgagt tgaagaaaat gatggatgcc tttgatgctt
      781 gggaaggaaa aggggtaagc tactggcgtg tgcctcatga gctgatagag tgttggactt
      841 tggaagaacg gcctttacac ggaagcctgc gtcatatggc cccaattcga aagaggcggc
      901 tgatagccct cagggaagag gatgaaggtg tgaactgtaa gactggtcct aagccagtca
      961 gatttttggg cccttctaca agtacccaaa ttaaagtcaa gaactctgct tcagtgaggg
     1021 tgtcacctgc caatgctgcc cagatctcct ctcaggctac agcaaaccgc tctcacagag
     1081 gcagctgtgg aaaggcagcc cagtgctctg tggccacagg ggcttctggg catgctcccg
     1141 cttcccccga tgcccagagc tctgaaaacc aagccacaca cccacctcca gccaaggtgc
     1201 tcctctctga aaagaagtct ccaccccctc gagtgatcaa gctgaggagg actccactgc
     1261 gtggggggcc ttccctgccc accgcctcag cagggggcca ggcctgcttc ccccagccac
     1321 cctctctaga agcttccagc agtttgggtg tgcagatgga gaccaggaaa gaccagcctg
     1381 atgggtaaag tgggcttgga acggcctgtt tgtcccacag cttccagcgc gctgatgccg
     1441 acagtgttct tgagcgggaa gagctaaacg tggatgttga ggattacgac aggaaaagtg
     1501 gatgccgtgg catgggagga gaggagggag actttgtggt tagggttact gtttactttg
     1561 cattttcctg aggtggtctc tgtgcagttt gatttctggt ttttattttt aagctttatt
     1621 taaatagtta actgatacca aggcaaccaa gcagtaagaa gtctcccctt tttacagtag
     1681 tgttagagtc ttcagtgtta ctcctacagt ccaggggtag gagtgaggtc tgggcctagg
     1741 tttctgtcag atggagaggg gcacctgtgc tggccacagt gtggcagcca gcagaagagg
     1801 tctcaagtgt gaccccacca gctgctccta gttgtttctt ttccaaagat aacatgaaaa
     1861 gaagtgatgg gggaaagggg aggaatacaa tgaaagctta gatggcgatc tcatgtgatt
     1921 gggccatttt attttccagg ttggctcttt actttgttct gttagcagct gtgtcttttt
     1981 tgtgcaccac aagggggaat gcatgtggta ggagctctag gacggttttt ggaacagtta
     2041 aaatatggga gtttactttg gtggcgtttt gaagtacttt gaaaaaggga agttaaacaa
     2101 gttaactttt taactcgtta gttggtttag aagtgaccat tgggtccttc tgattacaca
     2161 ctatgcttca tgcatacaat ttccatataa cttgaattta atattttaaa acaaaatctt
     2221 ttgattaatc tattttttca tgaccattga gttatgtgta ctttctctta catattatgt
     2281 ttggtaatta cactgtgcaa ttctacttcc catgagccct gtgcgtccgt gtttctagaa
     2341 gcaggttcat agagcaggcg ttccttactc agaggctggg cagtgcattg cattgctttg
     2401 agaaagtgag gcaggcatac tcatgatgct tctttttaaa taaattaaac atttccacaa
     2461 aaatgtgact tttctgtgac tacttactta actttgattt ataccctaat ttatgtaggg
     2521 tttctatttc tgtttccaaa attactttct tgtcttgctg attcatgaaa tgataaaatc
     2581 aactttgaat aaatatctac tggtatgttt ctcag
//
