LOCUS       XM_006497889            5469 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus potassium channel, subfamily T, member 1
            (Kcnt1), transcript variant X20, mRNA.
ACCESSION   XM_006497889
VERSION     XM_006497889.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006497889.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..5469
                     /gene="Kcnt1"
                     /gene_synonym="C030030G16Rik; Slack; slo2; Slo2.2"
                     /note="potassium channel, subfamily T, member 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 17 ESTs, 64 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:227632"
                     /db_xref="MGI:MGI:1924627"
     CDS             59..3313
                     /gene="Kcnt1"
                     /gene_synonym="C030030G16Rik; Slack; slo2; Slo2.2"
                     /codon_start=1
                     /product="potassium channel subfamily T member 1 isoform
                     X20"
                     /protein_id="XP_006497952.2"
                     /db_xref="GeneID:227632"
                     /db_xref="MGI:MGI:1924627"
                     /translation="MARAKLPRSPSEGKAGPGDTPAGAAAPEEPHGLSPLLPARGGGS
                     VGSDVGQRLHVEDFSLDSSLSQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFS
                     LKLLTCLLYIVRVLLDNPDQGIGCWGCTKYNYTFNGSSSEFHWAPILWVERKMALWVI
                     QVIVATISFLETMLIIYLSYKGNIWEQIFHVSFVLEMINTLPFIITVFWPPLRNLFIP
                     VFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERA
                     GGNLNLLTSFYFCIVTFSTVGFGDVTPKIWPSQLLVVILICVTLVVLPLQFEELVYLW
                     MERQKSGGNYSRHRARTEKHVVLCVSSLKIDLLMDFLNEFYAHPRLQQDYYVVILCPS
                     EMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAAD
                     HQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFAGTVAMDLQNTDCRPSQGGSGGDG
                     TKLTLPTENGSGSRRPSIAPVLELADSSALLPCDLLSDQSEDEVTPSDDEGLSVVEYV
                     KGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAE
                     TAGNGLYNFIVPLRAYYRSRRELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNL
                     DSLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHP
                     SNMRFMQFRAKDSYSLALSKLEKQERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQS
                     FVKDYMITITRLLLGLDTTPGSGYLCAMKVTEDDLWIRTYGRLFQKLCSSSAEIPIGI
                     YRTECHVFSEPHDVRAQGGPDIALLPAQSQISVNMEDCEDTREAKGPWGTRAASGSGS
                     THGRHGGSADPVEHPLLRRKSLQWARKLSRKSTKQAGKAPVATDWITQQRLSLYRRSE
                     RQELSELVKNRMKHLGLPTTGYEDVANLTASDVMNRVNLGYLQDEMNDHHQNTLSYVL
                     INPPPDTRLEPNDIVYLIRSDPLAHVASSSQSRKSSCSNKLSSCNPETRDETQL"
ORIGIN      
        1 ggtggttgcg cccggcgccg cccccgcccc cgccacccgc gccaagcgct cccgcaggat
       61 ggcgcgggcc aagctgccgc gctcgccgtc cgagggcaag gcgggtccgg gggacacccc
      121 agccggcgct gcagcccctg aggagccaca cgggctcagc ccgctactgc cggcccgcgg
      181 cgggggctcc gtgggcagcg acgtgggcca gaggcttcat gtggaagatt tcagcctgga
      241 ctcttccctt tctcaggtcc aggtggagtt ctatgtcaat gagaacacct tcaaagagcg
      301 gctcaagctg ttcttcatca aaaaccaaag atccagcctg aggatccggc tgttcaactt
      361 ctccctcaag ctcctcacct gcctgctgta tatcgtccgt gtcctgcttg acaacccaga
      421 ccagggcatc ggatgctggg gctgcacgaa gtataactac actttcaatg gctcatcctc
      481 tgagttccac tgggctccca tcctgtgggt ggagaggaaa atggctctgt gggtgatcca
      541 ggtcattgtg gccacaataa gcttcttaga gaccatgctc atcatttacc tcagctacaa
      601 aggcaacatc tgggagcaga tattccatgt gtctttcgtc ttggagatga tcaacacact
      661 gcccttcatc atcacggtct tctggccacc tctgcggaac ctgttcatcc ccgtgtttct
      721 caactgctgg ctggccaagc atgcgctgga gaacatgatt aatgacttcc accgtgccat
      781 cctacgcaca cagtcagcca tgttcaacca ggtgctcatc ctgttctgca ccctgctgtg
      841 cctggtcttc acagggacct gtgggatcca gcacctggag cgagcaggtg gcaacttgaa
      901 cctgctgacc tccttctact tctgcatcgt gactttctca actgtgggct tcggtgatgt
      961 gacgcccaag atctggccat cccagctcct ggtggtcatc ctgatctgtg tcacccttgt
     1021 ggtgctccca ctgcaatttg aagagcttgt ctacctctgg atggagcgtc agaagtcagg
     1081 gggcaactat agccgccacc gagcacggac ggagaagcac gtagtcctgt gtgtgagctc
     1141 cctcaagatt gatctcctca tggacttcct gaatgagttc tatgcccatc cccggctcca
     1201 gcaggactac tacgtggtca tcctgtgtcc ctctgaaatg gacgtccagg tgcgcagggt
     1261 gctgcagatt cccctgtggt cccagcgggt catctacctc cagggctctg ccctcaagga
     1321 ccaggatctc atgcgagcca agatggacaa cggagaggcc tgctttatcc tcagcagcag
     1381 gaatgaggtg gaccgcacag ctgcggatca ccagaccatc cttcgagcct gggctgtgaa
     1441 ggactttgcc cccaactgtc ccctctatgt ccagatcctc aagcccgaaa acaagtttca
     1501 cgtcaaattt gctgggacag tggccatgga cctgcagaac acagattgcc ggccctccca
     1561 gggtggcagt ggcggggacg gcacaaagct gactctgccc accgagaacg gctctggtag
     1621 tcgacgcccc agcatcgcac ccgttctgga gttggcagac agctcagccc tgttgccctg
     1681 cgacctgctg agtgaccagt cagaggatga ggtgacaccc tcggacgacg aggggctctc
     1741 tgtggttgag tacgtgaagg gctatccccc caactcaccc tacattggca gctccccgac
     1801 tttatgccac ctcctgcctg tgaaagcccc cttctgctgc ctgcggttgg acaagggctg
     1861 caaacacaac agctacgagg atgccaaggc ctatgggttc aagaacaagc tgattattgt
     1921 ctctgctgag acggcaggca acgggctcta caacttcatc gtgcctctgc gcgcctacta
     1981 ccggtcccgc cgggagctca accctatcgt gttgctgctt gacaacaagc ctgaccacca
     2041 cttcctggag gccatctgtt gcttccccat ggtctactac atggagggat ccgtggacaa
     2101 cctggacagc ttactgcagt gtggcatcat ctatgctgac aacctggtgg tggtggacaa
     2161 ggagagcact atgagcgctg aagaggacta catggcagat gccaagacca tcgtcaatgt
     2221 gcaaaccatg ttccggcttt tccccagtct cagcatcacc acggagctca cacacccttc
     2281 caacatgcgg ttcatgcagt tccgtgccaa ggacagctac tctctggctc tttccaaact
     2341 tgaaaagcaa gaacgggaga acggctccaa cctggccttc atgttccgcc tgccatttgc
     2401 tgctggtcga gtatttagta tcagcatgtt ggatacactg ctctaccagt ccttcgtgaa
     2461 ggactacatg atcaccatca ccaggctgct cttgggcctt gatactacac caggctccgg
     2521 ctacctctgt gcaatgaagg taaccgagga cgacctgtgg atccgcactt acggccgcct
     2581 cttccagaaa ctctgctcct ccagcgccga gatccccatc ggcatctaca ggaccgagtg
     2641 ccatgtcttc tcggagcccc atgacgtcag agcccagggg ggcccagaca tagccctcct
     2701 gcctgcccag tctcagatct cggtgaacat ggaggactgc gaggatactc gggaggccaa
     2761 gggaccctgg ggcacacgag ctgcatctgg cagtggcagc acccatggcc gtcacggggg
     2821 cagtgctgac ccagtggagc acccactact acgtcgcaag agcctgcagt gggcccgcaa
     2881 gctgagtcgc aagagcacca agcaggcagg gaaggcacct gtggccacag actggatcac
     2941 ccagcagcgg ctcagcctgt accgacgctc agagcgccag gagctctcag agctggtcaa
     3001 gaaccgaatg aagcacctgg gactgcccac cactggctat gaggacgtag caaatttaac
     3061 agccagtgat gtgatgaatc gggtaaacct gggatatttg caagatgaga tgaacgatca
     3121 tcaccagaac accctttcct atgtactcat caaccccccg ccagacacaa gactggaacc
     3181 caacgacatt gtgtacctca tccgttccga ccccctggcc catgtggcca gcagctccca
     3241 gagtcggaaa agcagctgca gcaacaagct ctcatcctgt aatcctgaga ccagggatga
     3301 gacccagctc tgagccccat gctggggcga acaggacgac acaggagaag agaggagaca
     3361 ctgtcacagg ctggcctggc ccaagcaggc tgcattatga ctttatacag tggctccaag
     3421 acttgccccc agaaaggaaa tcctctcagt ggggccagtc gtgagaccac tggaccactc
     3481 tggaaagtgg catgaagcat ttttttaacc ttttttacaa atctgaatga tttgcatctc
     3541 tttacatagc tgtaccacaa ctcgtgactg gggtctggct aaagagtgag gcaagcagac
     3601 aggacaggga ctggacccta tcctggatcc ctccgtcttg catggcttca ctcagcaatt
     3661 tctgaagggg tgctggggtg catgggagaa gtaatgacct ggaactggag agttccatag
     3721 gggactgggg agtcctcctg catggaagcc agctgtgttc tctagccatt caacatgctg
     3781 ttctgatcag tttctgcatg gttctgggag tacaccaggg cctatggggt gcctctcccc
     3841 agaaccaggc aaggggccaa ccagtaaagg tgccatgccc tttaagagga gaaaaacaga
     3901 ggggcttaga aacctggtcg ggagagcccc aacctgagtc tgagctctgc agcccctgca
     3961 tgggggaggg ggaccacagt ggctcctcca gaagtcctga gctgtggatg gaagtcaaaa
     4021 tgttctttct agctctcaca cttgagcttt cctagccatg gcctttgggg acatcgaact
     4081 ggcagatgat gtgtctccac agaccatttc acactcaaac tcttgtctct aaactcctga
     4141 tctgagaagc acaattagct ctgggccctg gtcatgcctc aggtctccag ggattgcttc
     4201 aggcagctga cttcattctt gtttatggtt tgtatgatca gaactggaac cttctattaa
     4261 aatggataca tcctgcaggc atgcatggaa caaggcagcc caccatagct ctggaatggt
     4321 ggtggtggtg gtggggagac agctgaggct cacctgtttt agggttagaa ttgcctcatg
     4381 tatccctcac cccagacttc acagactagc tcccaacctc tgggatggcc agcagggcct
     4441 tcccaaaata gtaatgaaat cctctgtggc tgcaggtggc tgggcctaga cagctgctcc
     4501 aaggtgtatg gggacgtgat ccccagagga cctcttggca agctttccat tggtttcccc
     4561 ctatggtcca gtccagcatg tcccaaagat aggcacaact cacttaaggt ctcaacgcct
     4621 ggagatccac ccttacccca cacttgggag gaaggtgtcc ctgatgtgac tatgtgaact
     4681 tcccccttaa gtgtcctgaa aggttggggt gaagggatgg gaccaaaggg cctacacttc
     4741 ctcagccaga gcagatggaa cctcaggaga gcaggagata agggtcaagg cagttgctgt
     4801 agcttgcttg agagcacttg cacctacgtc tccccttccc ataacctgcc tgcatatcca
     4861 gccttcctat tgccactctg tgcctgttgg aaccttcttg ctcacaaagt atgcatgagt
     4921 cctggtgagg tgtaatggga cagagctggc tctaaggact cagggaagaa gtttgggggc
     4981 ttgggtagag aagcaggtgg ctcacacagg gcttggctgg ccaggactta tctaggctag
     5041 gatctgtcag tggccatcac tctggagcag gaggggtctg agtctatact cacattctct
     5101 ctccctgctc agccacctgc caggctgctg agcccagaga aacaggaaag ctggtcttca
     5161 tctagatggg actaaatagc cttcaagtcc atgggaagag ctgccacttc tgaggcacct
     5221 tggggaaagc cacctgctcc aggccctgtc aggatgttta ctctcgtgtt catctgcagc
     5281 atggaaacac atttcagact ttaacagtgt gaggagggca ctcctcccac agctatagac
     5341 agatacttcc agcccagcct ttgctagctt ttaaagatgc ccagccctgg ggctggcatt
     5401 tgggccagga ggatttgtgt gctcagatac cagtcaccag atcaataaaa gccacctgca
     5461 cacctggaa
//
