LOCUS       NM_001039105            1799 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus potassium channel regulator (Kcnrg), transcript
            variant 1, mRNA.
ACCESSION   NM_001039105
VERSION     NM_001039105.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1799)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC154660.2.
            
            On Sep 13, 2022 this sequence version replaced NM_001039105.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY491736.1, BC147091.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-617               AC154660.2         53221-53837
            618-1799            AC154660.2         57417-58598
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 33.16 cM"
     gene            1..1799
                     /gene="Kcnrg"
                     /gene_synonym="Clld4; E030012H22Rik; Gm745"
                     /note="potassium channel regulator"
                     /db_xref="GeneID:328424"
                     /db_xref="MGI:MGI:2685591"
     exon            1..617
                     /gene="Kcnrg"
                     /gene_synonym="Clld4; E030012H22Rik; Gm745"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..852
                     /gene="Kcnrg"
                     /gene_synonym="Clld4; E030012H22Rik; Gm745"
                     /note="isoform 1 is encoded by transcript variant 1;
                     potassium channel regulatory protein"
                     /codon_start=1
                     /product="potassium channel regulatory protein isoform 1"
                     /protein_id="NP_001034194.1"
                     /db_xref="CCDS:CCDS27187.1"
                     /db_xref="GeneID:328424"
                     /db_xref="MGI:MGI:2685591"
                     /translation="MSGQDLVTLNVGGRIFTTRPSTLKQFPASRLAGMLDGRDQEFKT
                     VDGQIFVDRDGALFSFILDFLRNHELLLPSDFADHHRLQREALFYELDSLVDLLSQFL
                     LQSRSAVMEVHFLNQNTQAFFRVFGSCSKTIEMLSGRITMFVERPTALTGNRNSPLAL
                     PPQRPSHHDLLFHCGSDGAAENQAGVRYISIKPDNRKLANGTNVLGLLVDTLLKEGFH
                     LVSTRTPASGEKSECYVFERITTPQVLGMSKTPKSETTTMPAPSQK"
     exon            618..1799
                     /gene="Kcnrg"
                     /gene_synonym="Clld4; E030012H22Rik; Gm745"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1253
                     /gene="Kcnrg"
                     /gene_synonym="Clld4; E030012H22Rik; Gm745"
                     /note="major polyA site"
ORIGIN      
        1 agagagtttt taggagtctg ttattggtct gtagccacta gtgtgaagct aggcaggatg
       61 agtggtcagg acctcgtcac tttgaatgtg ggagggagga tattcacaac aaggccctct
      121 accctcaagc agttccctgc ctctcgcttg gcaggcatgt tagatggcag agaccaagag
      181 ttcaagacag ttgatggcca gatttttgtg gacagagatg gtgctttatt tagtttcatt
      241 ttagattttt tgagaaatca tgagcttctg ttaccctcgg actttgcaga ccatcatagg
      301 cttcagagag aggctctttt ctatgaactt gattctcttg ttgatctctt aagccaattc
      361 ctgctccaat caagatctgc tgtcatggag gtccatttcc taaaccaaaa tactcaagcc
      421 ttcttcagag tgtttggctc ttgcagcaaa acaatcgaga tgctaagtgg gaggattaca
      481 atgtttgtag agcgacccac agcactgacc gggaacagga actcccctct ggctttacct
      541 ccacaaagac cttctcacca cgatctgctt ttccactgtg gctccgatgg cgctgctgag
      601 aaccaagctg gagtcaggta catttccata aagcctgata atcgaaaatt ggccaacgga
      661 acaaatgtct tgggcctact ggtggacact ttattaaagg aaggctttca tctggtcagc
      721 actagaacac cagcctctgg agaaaaaagt gaatgctatg tctttgaaag gataacaacc
      781 cctcaagtcc ttgggatgag taaaacaccc aaatcagaaa ctaccaccat gccagcgccg
      841 tctcagaagt gacactgttc tttggacatt ccatatcggg gactgtctgt cagatctgta
      901 ctgtgtaact ttgggttcct cgagcagtgc ttaaagccac actgcctctt ctctcaaatc
      961 agcattggac tttgtgctct ggcccttgct tctttcgcca tgaactctca tagtttttag
     1021 aaatgggccc tggacttgga ctgtgtctaa tcctagttta gtcatttatt agctatgtga
     1081 cttaattgag acatttaaca tttctgtgtt ttaattttta tctattaact agggacaaaa
     1141 aaaaagtaac tcctcaaagg agacaaagtt ctcattatgt tgcccggcat gtggtaggca
     1201 ttcagtaact gttattaatg ataatgatca tgggtcactt gctttcaaac ccatctcttc
     1261 tccagggcct tgttttctcc cttgcctttt gcttctctgc agtgtcagtg ccttagcgtt
     1321 ctattgttat aagaagacac cttgaccatg gcgatgtcat gttcttatca ggaaaacatt
     1381 taattgtggc tggcttacag ttccagaggt ttagttcatt atcatcacag tggtaagcat
     1441 ggcagtatcc agatagacaa ggtgctggaa gagccaagag ttctacatct tgatccttag
     1501 acaacagaag gaaactgtgt caccctgagc atagcttgaa cataggagac ctcaaagccc
     1561 gcctccatag ggacatgctt cctcaaacaa ggccacacct cctagtagtc cctactccct
     1621 atgggccaag cgttcagaca catgagtcca ttgggagcca cacctattga aaccacgagt
     1681 cagtgactga accctcaggc atacaaagcc ctctatgact atgattgtac ccctcagcag
     1741 atgatccttc tgtatagaca catattatca taaaaccagg tttccctcaa aaaaccaat
//
