LOCUS       XM_030243865            5289 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus potassium intermediate/small conductance
            calcium-activated channel, subfamily N, member 1 (Kcnn1),
            transcript variant X3, mRNA.
ACCESSION   XM_030243865
VERSION     XM_030243865.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000074.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5289
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="8"
     gene            1..5289
                     /gene="Kcnn1"
                     /gene_synonym="KCa2.1; SK1; SKCa1"
                     /note="potassium intermediate/small conductance
                     calcium-activated channel, subfamily N, member 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 7 ESTs, 73 long SRA reads, 8 Proteins, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:84036"
                     /db_xref="MGI:MGI:1933993"
     CDS             2515..4131
                     /gene="Kcnn1"
                     /gene_synonym="KCa2.1; SK1; SKCa1"
                     /codon_start=1
                     /product="small conductance calcium-activated potassium
                     channel protein 1 isoform X3"
                     /protein_id="XP_030099725.1"
                     /db_xref="GeneID:84036"
                     /db_xref="MGI:MGI:1933993"
                     /translation="MSSHSHNGSVGQPLGSGPGFLGWEPVDPEAGRPLQPTQGPGLQM
                     VAKGQPVRLSPGGSRGHPQEQEEEEEEEEEEEDKTGSGKPPTVSHRLGHRRALFEKRK
                     RLSDYALIFGMFGIVVMVTETELSWGVYTKESLCSFALKCLISLSTVILLGLVILYHA
                     REIQLFLVDNGADDWRIAMTWERVSLISLELVVCAIHPVPGHYRFTWTARLAFSLVPS
                     AAEADLDVLLSIPMFLRLYLLARVMLLHSRIFTDASSRSIGALNRVTFNTRFVTKTLM
                     TICPGTVLLVFSVSSWIVAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDM
                     VPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNA
                     AANVLRETWLIYKHTRLVKKPDQGRVRKHQRKFLQAIHQAQKLRSVKIEQGKVNDQAN
                     TLAELAKAQSIAYEVVSELQAQQEELEARLAALESRLDVLGASLQALPGLIAQAICPL
                     PPPWPGPGHLATATQSPQSHWLPTMGSDCG"
ORIGIN      
        1 agtccggggt aatcggctcg aacaagggag gagctcctgg cgagggcggt gggggagggc
       61 tgctggcggg gtcttcccca ggtttcggcc ctcgcggtcg ccatggcaac cgtgcgggag
      121 ctgcagagtg agggctacag ggaagccggg cagatgtgcg catgcgccat cagggctggg
      181 gggttcccct ttagcaccgc gggggtgacg aggacaaagg gaccggcgcg ctgctgtaga
      241 gaagagccgg gtcagccctg cacggtttgc cacacctgtt ataccaacac ctagtggagg
      301 caggagaatt aggagttcaa ggccaacgtg ggctccgtga gcccttgtga aaaaaataaa
      361 aaatagatca cgcggcataa agcctgcagc cataatttgg ctccccctac tcctcatttc
      421 cccctccccc tgcaactctc catcctcaac catctcccca gtctctcccc tttcccactt
      481 ctcttccccg ggtctcgagc ctctcccaaa tcctggtgcc ataattccag cccagagtgt
      541 atgggcaaag acgtggcgcc ctcgcgtagc tctgcgctgt tcaacccggt gtctggcccc
      601 ggggctgcgc ctttggtgtc ctccaggacc cagggcccac ccagtgcctc tctgtccgca
      661 tcactcagag gtgcgtggca gtgtccagag ggacagtctc ctgtcgtaac cgcagtgcca
      721 ctctctttag ggtgcagacg ccttccttgc gcctttgtcc ttagtacaaa gctttcgtcc
      781 atcctttgta gagagagcgt gtgacacacg aggctatggg aacaatgagt cgcaagaaag
      841 gtcaggtctc agcggtcacc ctgaacacac actgtattcg gtccccagcg gcggggcagc
      901 cccactgaag ttactgaagt tttggggatg ccctgcagaa gtcattaagg acttctgtgc
      961 tgggtccaaa ggtccttctg aagtatctgt gcacagcccc ccttctctgg cacctttatt
     1021 tgaggtggac tcgccctaat tgcagctttc ttccggctcc ctaagagtct ttaggctcct
     1081 ctttctcctt gggaaggaga tgaatgtatc aagaatggag ggagtcggtg acctgaaacc
     1141 cgggcgaggt ggccagtagg gacgcctgtc ggggatcacc ttcaggttgt gaatgagagg
     1201 tgagagtagt tggcacacgg cagagctggt caaagagtcc agatgctccc gaagctggcc
     1261 cggttctgag ggacgctggg tttggtcagg ggtcacccag agggtctgtg aaagactatg
     1321 gggctgggaa aagtccagtt ggtctcctcg cttgcaagga gagacaggag agacgtgcgg
     1381 gacaggaatg tgacctgtca ccaggctgtc aaggtgtttc atgaggcagg gattgtagtg
     1441 agtctaagaa tcgcgggtcg aggactccac tcagggcgat ataaggttca gggttcccca
     1501 caacgaaggg aatcctttgt cgtccctccc tcgagctctg ttctgcagac ccagaagtcc
     1561 tcctttctgt cttgtttctc accgcccgcc cgcggctccg cggtgggagg ggcgctcgca
     1621 acccgcgccg gtcgcgggtg catcccagcc ccgcccgtcc gaggaatccc cggccaccgc
     1681 gggagcgcgg cgctgctcac gaagtgctgc ggggctgggg gactggcgag gggggacggc
     1741 tatttttaga acatatggaa gaaaaaatac aaaaacaaaa ataacaacaa caaaaatgat
     1801 ggaaactctt aaaggcctcc agactcccag gaggaaatcc ccctgtctca gaccgtggca
     1861 gaaggacctt ccagcctggg ccgcgtcatc agctgctgga gtctcccggc gtctctccct
     1921 ctcgaccctt ccctgcccca ggctcagctt ctcgctggag tgcatttccc tgtgggaggc
     1981 gacagctgct gcacctgact gggttgaagg acaaggatcc ctggtctttg tcgcagcctc
     2041 agtttccccg tctgaaaact gcgcgcgtaa agccagcgga caccaaggat cgccccagcc
     2101 cttggcgtgt cctcggtcac tgtcctcggc ctcggcgggg agcgcgctgg gtgccgccgc
     2161 ggaggggaca cctgaccgtc cccagcgggc cgcgcgggtg gggggtccgc gctgcagcgg
     2221 cgcgcgcacc tctgttccca cgcccttgcc cgtctgctta ctcacttggt tttgctctcg
     2281 ggccgggacg cagggactcc agcagctgcg gctggagact actggtgtgg agaagagcca
     2341 agggcagggc catcccacgt ctgagggcaa cttcaagaca cggaagagca gcggcctcag
     2401 gttggtggtt tccagagccc cttggacccc agggtccatt cagaagctct gctgcggaac
     2461 catgctgggc cccaaagggc ctgctgcacg cccagcccac ggaggcaggt ggccatgagt
     2521 agccacagcc acaatggcag cgtggggcag cctctgggca gcgggcctgg attcctgggc
     2581 tgggagcctg tggaccctga ggcaggccgc cccctgcagc ccacccaagg cccaggcctg
     2641 cagatggtgg ccaagggtca gcctgtcagg ctgtcacccg gtggttccag gggccacccc
     2701 caggagcagg aggaggaaga ggaagaggag gaggaggagg aggacaagac aggctcaggg
     2761 aagcccccaa cagtcagcca ccgcctggga caccgcaggg ccctctttga aaagcgtaaa
     2821 cggctcagtg actatgcgct catctttggc atgtttggga ttgtcgtcat ggtgacagaa
     2881 acagagctgt cctggggtgt atacaccaag gagtcactct gctcttttgc tctgaaatgc
     2941 ctcatcagcc tgtccactgt catcttgctt ggccttgtca tcctgtacca cgcccgagag
     3001 atccagctgt tcttggtgga caatggtgcc gacgactggc gtatcgccat gacgtgggag
     3061 cgcgtgtccc tgatctcgct ggagttggtc gtgtgtgcca tccacccggt gcccggccac
     3121 tatcgcttca cgtggacggc acgactggcc ttctctctgg tgccgtcggc agccgaggca
     3181 gacctggatg tgctgctgtc catccccatg ttcctgcgcc tctacctgct ggctcgggtc
     3241 atgctcctgc acagccgcat cttcaccgat gcatccagcc gcagcatcgg ggcccttaac
     3301 cgcgtcacct tcaacacacg cttcgtcacc aagacgctca tgaccatctg ccccggcact
     3361 gtgttgttgg tcttcagcgt ctcctcctgg atcgttgctg cgtggacagt gcgcgtgtgt
     3421 gagaggtacc acgataagca ggaagtgacc agcaacttcc tgggagccat gtggctcatc
     3481 tccatcacct tcttgtccat tggctatgga gacatggtgc cgcataccta ctgtgggaag
     3541 ggtgtgtgtc tgctcactgg catcatggga gcaggctgca ctgcactcgt ggtggccgtc
     3601 gtggctcgga agttggaact caccaaggct gagaaacacg tgcacaactt catgatggac
     3661 acacagctca ccaagcgggt caaaaatgct gctgcaaacg ttctcaggga gacatggctc
     3721 atctacaaac acaccaggct ggtgaagaag ccagaccaag gccgggttcg gaaacaccag
     3781 cgtaagttcc ttcaggccat ccatcaggct cagaagctcc gaagtgtgaa gattgaacaa
     3841 gggaaggtga acgatcaggc caacacgctg gctgagctgg ccaaggcaca gagcatcgca
     3901 tatgaggtgg tgtcagagct gcaggcccag caggaggagt tggaggcacg cctagccgcc
     3961 ttggagagcc gactggatgt cctgggtgcc tccctgcagg ctctaccagg ccttatagcc
     4021 caagccatat gccctctacc accaccctgg cctgggcctg gtcacctggc cacagccacc
     4081 cagagcccac aaagccactg gctgcccacc atgggatcag actgtgggtg atggctgctg
     4141 accgctagac tgctccatct cagccatcgt gtggccacag ctagctcctt gccgttttgg
     4201 acctccggac tactgcattt agaagcttgg gtgaactgag ccgactggac tggcactcat
     4261 ccttctgagg ctgggccaca ggatccaggt ccccttagct gtcccaggcc ccaggagggc
     4321 aaggagtagt agcaggggcc tcaacatttc taagtaaatc aggagcttcc agcccgcttt
     4381 ctgttgacat gcagggggct gcaaacatct ccccagagga ggtagatgac cccacctggg
     4441 gattccttaa tggacgggga cagacgtgga aagtcactgc acatgcattg agtatctact
     4501 gtatacaggg actgaaacaa tggcttttct tcaggatcta tctaactgga gtaagataca
     4561 aacaaatgag aattcagaga ggtgaggcca cttgcctgta gccacacagc aatggtctga
     4621 ggcaaacaca cttgttaaac agcataagcg gatagattct acttggggat cctgatgtca
     4681 aagtaaggac acacgggagg gtgagaggcc agggttacag acgagcagag tcaccacggt
     4741 cacttcagac cttaggcttc agactttggg tacttgggga acactgagac acctcacagg
     4801 catgggcggc ttatcaagag cagcctaagt cacagtgtcc tctgatcaga ctttcagcca
     4861 cctgtcttgg gagatagtgg acctgtgtgg gaacccagag gcccagtttg gattctataa
     4921 gtttgtgggg tggagctctg gggtggacct gggcaggctt tattcccctg ctgctgtggg
     4981 aaacaggcct aacccaaccc ccacacgggt cagacagtag gtgctcaata aataccccct
     5041 ccttcctaag actgcccatg agggcttggg aaacatggac ccatcctgcc ccttctgagc
     5101 ccagtattag ctcctgtcca tcaggaaggg gactgagatc aaaacaggtc cagaagaaat
     5161 aaacaaggca ggtcaatgtg acacatgcct ttattcctaa cacctaggag gcaaaggcag
     5221 gtgggttgca gtgtatacag tgtaagacgt ggggtggcac agaaataaac aaggctgtag
     5281 gtgacttgg
//
