LOCUS       NM_198937               2606 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus Jupiter microtubule associated homolog 2 (Jpt2), mRNA.
ACCESSION   NM_198937 XM_110265 XM_128602
VERSION     NM_198937.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Zeng,T.T., Deng,T.H., Liu,Z., Zhan,J.R., Ma,Y.Z., Yan,Y.Y., Sun,X.,
            Zhu,Y.H., Li,Y., Guan,X.Y. and Li,L.
  TITLE     HN1L/AP-2gamma/PLK1 signaling drives tumor progression and
            chemotherapy resistance in esophageal squamous cell carcinoma
  JOURNAL   Cell Death Dis 13 (12), 1026 (2022)
   PUBMED   36476988
  REMARK    GeneRIF: HN1L/AP-2gamma/PLK1 signaling drives tumor progression and
            chemotherapy resistance in esophageal squamous cell carcinoma.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Kumada,T., Yamanaka,Y., Kitano,A., Shibata,M., Awaya,T., Kato,T.,
            Okawa,K., Abe,T., Oshima,N., Nakahata,T. and Heike,T.
  TITLE     Ttyh1, a Ca(2+)-binding protein localized to the endoplasmic
            reticulum, is required for early embryonic development
  JOURNAL   Dev Dyn 239 (8), 2233-2245 (2010)
   PUBMED   20568244
REFERENCE   3  (bases 1 to 2606)
  AUTHORS   Silvestri,C., Narimatsu,M., von Both,I., Liu,Y., Tan,N.B., Izzi,L.,
            McCaffery,P., Wrana,J.L. and Attisano,L.
  TITLE     Genome-wide identification of Smad/Foxh1 targets reveals a role for
            Foxh1 in retinoic acid regulation and forebrain development
  JOURNAL   Dev Cell 14 (3), 411-423 (2008)
   PUBMED   18331719
  REMARK    Erratum:[Dev Cell. 2008 Apr;14(4):633]
REFERENCE   4  (bases 1 to 2606)
  AUTHORS   Tu,S., Shin,Y., Zago,W.M., States,B.A., Eroshkin,A., Lipton,S.A.,
            Tong,G.G. and Nakanishi,N.
  TITLE     Takusan: a large gene family that regulates synaptic activity
  JOURNAL   Neuron 55 (1), 69-85 (2007)
   PUBMED   17610818
REFERENCE   5  (bases 1 to 2606)
  AUTHORS   Cobellis,G., Nicolaus,G., Iovino,M., Romito,A., Marra,E.,
            Barbarisi,M., Sardiello,M., Di Giorgio,F.P., Iovino,N., Zollo,M.,
            Ballabio,A. and Cortese,R.
  TITLE     Tagging genes with cassette-exchange sites
  JOURNAL   Nucleic Acids Res 33 (4), e44 (2005)
   PUBMED   15741177
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 2606)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   7  (bases 1 to 2606)
  AUTHORS   Zhou,G., Wang,J., Zhang,Y., Zhong,C., Ni,J., Wang,L., Guo,J.,
            Zhang,K., Yu,L. and Zhao,S.
  TITLE     Cloning, expression and subcellular localization of HN1 and HN1L
            genes, as well as characterization of their orthologs, defining an
            evolutionarily conserved gene family
  JOURNAL   Gene 331, 115-123 (2004)
   PUBMED   15094197
REFERENCE   8  (bases 1 to 2606)
  AUTHORS   Kargul,G.J., Nagaraja,R., Shimada,T., Grahovac,M.J., Lim,M.K.,
            Nakashima,H., Waeltz,P., Ma,P., Chen,E., Schlessinger,D. and
            Ko,M.S.
  TITLE     Eleven densely clustered genes, six of them novel, in 176 kb of
            mouse t-complex DNA
  JOURNAL   Genome Res 10 (7), 916-923 (2000)
   PUBMED   10899141
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC154229.1.
            
            On Nov 17, 2006 this sequence version replaced NM_198937.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC057024.1, AK152573.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164140, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-56                AC154229.1         67148-67203         c
            57-205              AC154229.1         62598-62746         c
            206-348             AC154229.1         55218-55360         c
            349-397             AC154229.1         52160-52208         c
            398-2606            AC154229.1         49050-51258         c
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 12.53 cM"
     gene            1..2606
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /note="Jupiter microtubule associated homolog 2"
                     /db_xref="GeneID:52009"
                     /db_xref="MGI:MGI:1196260"
     exon            1..56
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..585
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /note="hematological and neurological expressed 1-like
                     protein; HN1-like protein; hematopoietic- and
                     neurologic-expressed sequence 1-like"
                     /codon_start=1
                     /product="jupiter microtubule associated homolog 2"
                     /protein_id="NP_945175.1"
                     /db_xref="CCDS:CCDS28504.1"
                     /db_xref="GeneID:52009"
                     /db_xref="MGI:MGI:1196260"
                     /translation="MFQGADSQAGKSGSRSMKPPGGESSDLFGSPEEGISSSKPNRMA
                     SNIFGPTEEPKNIPKRTNPPGGKGSGIFDESTPVQTRQRLNPPGGKTSDIFGSPVTAT
                     APLAHPNKPKDHVLLCEGEDSKSDLKAATDSTPRGEQSDKGSSKEVEHAKIPEPTPTV
                     DSHEPRLGPRPRSHNKVLNPPGGKSSLSFY"
     exon            57..205
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /inference="alignment:Splign:2.1.0"
     exon            206..348
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /inference="alignment:Splign:2.1.0"
     exon            349..397
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /inference="alignment:Splign:2.1.0"
     exon            398..2606
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2585..2590
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /note="hexamer: ATTAAA"
     polyA_site      2606
                     /gene="Jpt2"
                     /gene_synonym="2810430B18Rik; C16orf34; D17Ertd441e; Hn1l"
                     /note="major polyA site"
ORIGIN      
        1 gcggcggccg acatgttcca gggcgcggac agccaagctg gcaagtcggg ttccaggtcc
       61 atgaagcccc cgggaggaga atcgagcgat cttttcggaa gtccagaaga aggtatttct
      121 tcaagcaagc ctaataggat ggcatctaat attttcggac caactgaaga acctaaaaac
      181 atacccaaga ggacaaatcc tccaggaggc aaaggaagtg ggatctttga tgaatcgact
      241 cctgtgcaaa ctcgacaacg tttgaatcca ccagggggga agaccagtga catatttggg
      301 tccccagtca ctgccactgc gcctctggca cacccaaaca agcccaagga tcatgttttg
      361 ctgtgtgaag gtgaagactc taagtctgac ctgaaagctg caacagactc cacacccaga
      421 ggagagcaga gtgacaaagg aagctcaaaa gaagtagagc atgcaaagat accggagccc
      481 acacctacag ttgacagtca tgaacccaga ctggggccac gacctcgctc ccacaacaaa
      541 gtcctgaacc caccaggagg caaatccagc ctctccttct attgagaagc tcctgctctg
      601 cctgtaacta gaccagacag agatagagta ttgaatgtta gtgtttcctt taactcaaat
      661 gagctggggt gggagagggt ttgtcatgcg tgtggggttg actgctcata agccttgttg
      721 tcatgggcag agctgcacag aggactgcca agacatacat tgtggggtaa actgggatgc
      781 tctggtccct cctctctaac tgctctctat gaaacacatc tgtaaagttc tggggaaggc
      841 agaagagctg ggccattaac agaagggttc cagggtcttt cttgtccttg tgttagcagg
      901 ctgctggctg ttgggcatct aagtatggtt tggttgaaaa aaaccccaca ctactctcac
      961 tgtgggctgg aggagacaca cacaaacaga aactcttaaa gacaaagtgg agtctgcact
     1021 aactaagcct ttcaggaaat gcctatcact aaatgcttcc ccctctgaga tacctcagaa
     1081 ccctaatgtc tcctctcctt ctcccattat gtcactctgt agtattgaaa catgactgct
     1141 ctttttggta gcagtcaaca gaaagtcagg ccgttattct cagtcctgtc ctgggtggaa
     1201 gggtttttta tacaccaatc ttctgagttg tcccatactg cacctaaaat catggccagg
     1261 tctgtggtag cagcctgtct tcctctacag ctggcttagt tcctgatgtg ccagatttgc
     1321 atgtgggttg ttccttttgt ttgtctcatc agccttaagc ataggcctta gttctgcacc
     1381 tgtgaggggt tctccctgtt catggttctt cctgtacaga aggtctctgg cctctgcagg
     1441 gccatatatg tccaggtatt gggtggattc ctgttctcct gtcttgcttt gctcctataa
     1501 ttgggaggaa agcctgctga aggatgttgg gttcgttggc tgctttacca atgtatggaa
     1561 aggtgttttt agtgtcagct tcttataaat acctgtgcat tgcttcaacg cttagaaaag
     1621 tgctactctc tacaccaaag cacaagagct gcctttagaa agctttagac ttcttgaccc
     1681 tgctcataaa cagtgctcct tgagccagga tactaagtgt tttggcagga aggtcagaac
     1741 agtcatttga cagcagaggt agagtcacgt cacttcctgc caggcagatg tccctgttca
     1801 gcccttgcgg ggttccttct ttcccctctg gggtgcatct gtggaaaggg attctgagtg
     1861 ctgctgcttc tgcttctccc gcccacagag cgcttcacag taggtgccaa aaatgtcctc
     1921 agtaaatctt ggaaaagtgg caatcctgca ttcacacacc gacacactga cctacaagtg
     1981 cctgcaggag ccacctgccg ggctctgcat cctacccggt ctgttgaggg ctctgaccat
     2041 ggctttatca accaaagagt tttcctcttc agatgccctg tatcctgaag ccaagtaaca
     2101 ggtcttacat gtatgtaatt ctctaacaac tcaaatggtt tgtggttcag tcatcatgag
     2161 ctctattttg gaatttagag catttttttc catttaagaa aatgtcataa atgatgttga
     2221 ctttatttag cccagacact aactttttta gcttataagg aaataataca atgatagaga
     2281 taaacctttt ataactgctc tcttaagtag aaaatgattt gtgagttcca aattggattg
     2341 tctcgaggaa tctaacatca ctatgctgat tctgctctta gccctgtgag agaaaagctt
     2401 caagcgccac ctgctggcct ggatggctgg gaggatatgg ggacctgcaa cagtggtcca
     2461 cagcagtggc tgccttattc atctcccatc cttctatctt ctgctacagc tggactcaga
     2521 gtgtgaatct gtaaattagt gcccagctaa atccagtaat atacaattgt cacctacatt
     2581 aagcattaaa acttttttta agtgta
//
