LOCUS       NM_001163637            3511 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus janus kinase and microtubule interacting protein 2
            (Jakmip2), mRNA.
ACCESSION   NM_001163637 XM_129010 XM_922928
VERSION     NM_001163637.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Whiley,P.A.F., O'Donnell,L., Moody,S.C., Handelsman,D.J.,
            Young,J.C., Richards,E.A., Almstrup,K., Western,P.S. and
            Loveland,K.L.
  TITLE     Activin A Determines Steroid Levels and Composition in the Fetal
            Testis
  JOURNAL   Endocrinology 161 (7) (2020)
   PUBMED   32274496
REFERENCE   3  (bases 1 to 3511)
  AUTHORS   Bernardo,A.S., Jouneau,A., Marks,H., Kensche,P., Kobolak,J.,
            Freude,K., Hall,V., Feher,A., Polgar,Z., Sartori,C., Bock,I.,
            Louet,C., Faial,T., Kerstens,H.H.D., Bouissou,C., Parsonage,G.,
            Mashayekhi,K., Smith,J.C., Lazzari,G., Hyttel,P., Stunnenberg,H.G.,
            Huynen,M., Pedersen,R.A. and Dinnyes,A.
  TITLE     Mammalian embryo comparison identifies novel pluripotency genes
            associated with the naive or primed state
  JOURNAL   Biol Open 7 (8) (2018)
   PUBMED   30026265
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ149565.1, AK133750.1, BC094439.1 and BY635087.1.
            
            On or before Jul 29, 2009 this sequence version replaced
            XM_922928.3, XM_129010.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK133750.1, SRR1660813.247481.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849375,
                                           SAMN00849377 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-36                CJ149565.1         2-37
            37-1690             AK133750.1         2-1655
            1691-2086           BC094439.1         1253-1648
            2087-3411           AK133750.1         2053-3377
            3412-3511           BY635087.1         313-412
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 23.36 cM"
     gene            1..3511
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /note="janus kinase and microtubule interacting protein 2"
                     /db_xref="GeneID:76217"
                     /db_xref="MGI:MGI:1923467"
     exon            1..321
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            322..600
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             472..2934
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /codon_start=1
                     /product="janus kinase and microtubule-interacting protein
                     2"
                     /protein_id="NP_001157109.1"
                     /db_xref="CCDS:CCDS50271.1"
                     /db_xref="GeneID:76217"
                     /db_xref="MGI:MGI:1923467"
                     /translation="MSKKGRNKGEKPEALIVALQAANEDLRTKLTDIQIELHQEKSKV
                     SKLEREKTQEAKRIRELEQRKHTVLVTELKAKLHEEKMKELQAVRENLIKQHEQEMSR
                     TVKVRDGEIQRLKSALCALRDGSSDKVRTALTIEAREEARKQFDAERLKLLQEITDLK
                     TAKKQVDEALSNMIQADKIKAGDLRSEHQSHQEAISKIKWESERDIRRLMDEIKAKDR
                     IIFSLEKELETQTGYVQKLQLQKEALDEQLFLVKEAECNMSSPKREIPGRAGDGSEHC
                     SSPDLRRNQKRIAELNATIRKLEDRNTLLGDERNELLKRVRETEKQCKPLLERNKCLA
                     KRNDELMVSLQRMEEKLKAVTKENSEMREKITSHPPLKKLKSLNDLDQANEEQETEFL
                     KLQVIEQQNIIDELTRDREKLIRRRKHRRSSKPIKRPVLDPFIGYDEDSMDSETSSMT
                     SFRTDRTPATPDDDLDESLAAEESELRFRQLTKEYQALQRAYALLQEQTGGIIDAERE
                     AKAQEQLQAEVLRYRAKIEDLEATLAQKGQDSHWVEDKQLFIKRNQELLEKIEKQEAE
                     NHRLQQELQDARDQNELLEFRNLELEERERRSPPFNLQIHPFSDGVSALQIYCMKEGV
                     KDVNIPDLIKQLDILGDNGNLRNEEQVAIIQASTVLSLAEKWIQQIEGAEAALHQKMM
                     ELESDMEQFCKIKGYLEEELDYRKQALDQAYMRIQELEATLYNALQQETVIKFGELLS
                     DKQQEELRTAVEKLRRQMLRKSREYDCQILQERMELLQQAHQRIRDLEDKTDIQKRQI
                     KDLEEKFLFLFLFFSLAFILWP"
     exon            601..1098
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1099..1308
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1309..1407
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1554
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..1695
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1696..1752
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1753..1872
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1873..2001
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..2085
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2086..2148
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2149..2247
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2248..2346
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2347..2400
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2401..2466
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2467..2535
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2536..2613
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2614..2817
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2818..2883
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2884..2954
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2955..3511
                     /gene="Jakmip2"
                     /gene_synonym="6430702L21Rik; D930046L20Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggggtgggg agggaaggag gagcctgagg aggtgtctgc tgcaagttcc tggctgattc
       61 tgagctcaca ccatcctcca agagggagga ggctcaagtg atgctgctgc tgttgccgcc
      121 tctactgctg gtactctagt ggagctggaa agggtggttc ctatcgcacc atcgccaacc
      181 agagagggag gggaaaaatc ccggcagccg gcagccgcag ctgatgttgg gttcagaggc
      241 tgcatccgac ccggtcacaa gaaaaatgga ttcagtgtgc ggcgctccct cgtttcagca
      301 tcttctcctg gtctcagcat gggcttccga ggaaacgttt gagaagacct tagcaaggaa
      361 caccaccacg cagtagtggc tgaagcatct cactccagga aatgaaacag taacatggca
      421 gtacctgttt gagaggatta aaacccaaaa gactccaatt agaaagggac aatgtccaag
      481 aaagggcgga ataagggcga gaagcccgag gcactcattg ttgcccttca agctgccaac
      541 gaagacctca ggaccaaact cacagacatc cagatagaac tgcatcaaga gaaatccaag
      601 gtatcaaagc ttgaaagaga gaagactcaa gaagcaaaga ggattcgtga gttggagcag
      661 cgcaaacaca cggtcctggt gaccgagctt aaagccaagc tccacgagga gaagatgaag
      721 gagctgcagg ccgtgaggga gaatctcatc aaacagcatg agcaggaaat gtcaaggaca
      781 gtgaaggtgc gggatgggga gattcagaga ctcaagtccg cgctgtgtgc tctccgggat
      841 ggcagcagcg acaaagtaag gacagcactc accattgagg cccgggagga ggcccggaaa
      901 cagttcgatg cagagcgcct gaagctcctg caggaaatta cagacttgaa aactgccaag
      961 aagcaggtgg atgaggctct aagcaatatg atccaagcgg ataaaatcaa agctggggac
     1021 cttaggagtg agcatcagtc ccaccaggaa gccatctcga agatcaagtg ggaatccgaa
     1081 cgggatatac ggaggctgat ggatgaaatc aaagccaagg acaggatcat cttttccctg
     1141 gaaaaagaac tggagactca gacgggctat gtgcagaaac tccagcttca gaaggaggct
     1201 ctggatgagc agctcttcct tgtcaaggag gcagagtgta acatgagcag tccgaagaga
     1261 gagattccag gaagggcagg agacggctct gagcactgca gcagccccga cctgcgaaga
     1321 aatcaaaaga gaatagctga gttgaacgcc actatacgaa agttagaaga caggaacacc
     1381 ttgcttggag atgagcggaa tgagttgtta aaacgcgtgc gggaaaccga aaaacaatgc
     1441 aaacctctcc tggaaaggaa caagtgccta gccaagagaa acgatgaact gatggtgtct
     1501 ttgcagcgca tggaagagaa actaaaagcc gtaaccaagg aaaattcaga aatgagagaa
     1561 aaaataacat ctcacccacc tttgaagaaa ctgaagtctc tgaacgacct tgaccaagct
     1621 aatgaagaac aagagacaga gtttctaaaa ctgcaggtca ttgagcagca aaacatcatt
     1681 gatgagctca caagggatcg agaaaaactc atccgtagaa gaaagcacag gagaagctcg
     1741 aaaccaatca agaggcctgt tttagatccg ttcattggct atgacgagga ctccatggat
     1801 tcagaaacat catccatgac ctcctttaga acagaccgga cacctgctac ccccgatgat
     1861 gacctggatg aaagtctagc tgctgaagaa tctgagctac gatttagaca actaacaaaa
     1921 gaataccaag ccctccaaag agcatatgcc ctcttgcagg aacagactgg cggcatcatc
     1981 gatgctgaaa gagaagccaa ggcacaagag cagctccagg cagaggtgct gaggtacagg
     2041 gccaaaatcg aagatctaga ggcaacgctg gctcagaaag ggcaggattc acactgggta
     2101 gaagataaac aacttttcat taagagaaac caggagcttt tagaaaagat agagaagcag
     2161 gaagcagaga atcaccggct acagcaggaa cttcaggatg ccagggacca gaatgagctg
     2221 ctggagtttc gcaacctaga actggaagag agagagaggc gatcccctcc atttaatcta
     2281 caaattcacc ccttctcaga tggtgtgagt gcgctgcaga tctactgcat gaaagaaggt
     2341 gtcaaggatg tcaacatccc tgacctcata aagcagcttg atatcctagg tgacaacggg
     2401 aacctaagga atgaagaaca ggtggccatt attcaggcca gcactgtgct gtccctggca
     2461 gaaaagtgga tccaacaaat tgaaggagcg gaggctgccc tgcaccagaa aatgatggaa
     2521 ctggaaagtg acatggaaca gttctgcaaa atcaaaggct acctggagga agaactagac
     2581 tacagaaaac aggctcttga ccaggcatat atgagaatcc aggaactaga agctactttg
     2641 tacaatgctc tgcagcaaga aactgtgatc aaattcggcg aactgttaag tgacaagcag
     2701 caggaggagc tgaggacggc tgtggaaaag ttacggcggc aaatgctgag gaagagccgg
     2761 gagtacgact gtcagatcct ccaggagagg atggagctcc tgcagcaagc gcaccagaga
     2821 atccgtgacc tagaagataa aacagacatc caaaagcgac agataaagga cctagaagaa
     2881 aagtttctgt ttctattctt gttcttctct cttgccttca ttctatggcc ttgatgtcaa
     2941 ggtgcctctt aaagaaaaat caagaactcg gatcataccc tcagaaggca aatgctttta
     3001 aaccttcaaa gatggcaaaa ttgtttacac cgatgtaagg gaaatcaaaa gctaagagtt
     3061 accctgtagc caagactatg tgctttaaag ccattattca aggtttctta cttgacagtt
     3121 tataatgacc ctgttgaaaa ttctacatta tatgctgcat ttaatgaaac atgtgtatgt
     3181 caaaccagaa gaagagaact ataaacatat attgtgtgaa gaagaatttc agccgtggaa
     3241 ccagtttcag cagatcaaga gaagatgtgt cttgggcatg gaaccaaagt tacaatgaaa
     3301 cattcaactc ctgctgtgca ggggggtgtc attttaatgt aacaccacac cccatggaaa
     3361 cactattcct gaaaataaac gtcattttaa aaaaacaaaa caaacaaaag tgaaaaaaaa
     3421 aaaaaaaaaa aaacaaccca agggtgggcg ggtaatgaag cacgaggaat aatacctatg
     3481 aggaactatt tacaataaaa tgtttccttt g
//
