LOCUS       NM_001081665            3707 bp    mRNA    linear   ROD 08-AUG-2024
DEFINITION  Mus musculus ITPR interacting domain containing 1 (Itprid1),
            transcript variant 1, mRNA.
ACCESSION   NM_001081665 XM_144699 XM_907539 XM_986510
VERSION     NM_001081665.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3707)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC084163.4 and AC079365.5.
            
            On Mar 15, 2023 this sequence version replaced NM_001081665.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC116335.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-201               AC084163.4         149574-149774
            202-391             AC084163.4         185148-185337
            392-440             AC084163.4         186990-187038
            441-484             AC084163.4         187382-187425
            485-536             AC084163.4         197386-197437
            537-623             AC084163.4         199689-199775
            624-826             AC084163.4         201709-201911
            827-1413            AC084163.4         210355-210941
            1414-1471           AC084163.4         214129-214186
            1472-1554           AC079365.5         72158-72240
            1555-2742           AC079365.5         72720-73907
            2743-2870           AC079365.5         80686-80813
            2871-2982           AC079365.5         81441-81552
            2983-3707           AC079365.5         83261-83985
FEATURES             Location/Qualifiers
     source          1..3707
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 27.65 cM"
     gene            1..3707
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /note="ITPR interacting domain containing 1"
                     /db_xref="GeneID:232016"
                     /db_xref="MGI:MGI:2685304"
     exon            1..201
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            202..391
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            392..440
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            441..484
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            485..536
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            537..623
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            624..826
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            827..1413
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            1414..1471
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            1472..1554
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..2742
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            2743..2870
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            2871..2982
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     exon            2983..3707
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3529..3534
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /note="hexamer: AATAAA"
     polyA_site      3566
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /note="major polyA site"
     regulatory      3684..3689
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /note="hexamer: AATAAA"
     polyA_site      3707
                     /gene="Itprid1"
                     /gene_synonym="Ccdc129; D530004J12Rik; Gm458"
                     /note="major polyA site"
ORIGIN      
        1 gtctttcaga cagtctagga gtggagcttg cggcaggtgg atagggatgt gggggagaca
       61 gggggttctg gtgagcatct agggaggtgg ctcaggtgaa cagctgtgag gggttgatga
      121 acagctttag agggcccagg tgagcagtgg ctttggagaa tgaacattgc ttgtccccag
      181 aactctactc cgcctgggaa gtttcagtaa gcttgtggaa ccaccctcat gataatggag
      241 gaattacaag gatctgacac tcccagagca ggtctggaga tgagcaagag agatatccta
      301 agacatacga agagggcatg ggcacctctg gatgggcatc tgcttcctga ctctgaggaa
      361 gaaaacccaa tggtcactat gtatgtgcaa gaaaattcca aacaggaaag tatccagcag
      421 tggctagact ctggattctt tgtctctgta aatgaaaact tccagcaaac catcaaccat
      481 actgcttctt tgcacgaaca aggaatcatt caaatgaccg tgaaagacta catgagatct
      541 ctacatcagt tctcagagac tcctaccctg tccagaggga ctagtttcaa ctcgtgttat
      601 tccaccacag gtgtacctca aagcattcct gaatggctgg aattttggga aaaagatcca
      661 gtggagattc tcttggactt ggggtttggt gctgatgaac cagatatctg cacacaaatc
      721 ccagcccggt tccttggcta tagctcagca gccagaggaa ttaacatcca tgtttttctt
      781 gaagcacaga agcagcggat ggactttgag aaccctgact tatatggtcg gttccaacag
      841 ttggaaatcc tggatcatgt gaccaatgcc ttctcttctt tgctggatgg tgttaaaacc
      901 caacagaacc aacatgaaga aaaagctgaa agacaggcta tgcaaaatcc ttcatcaagt
      961 ggagctaaag aacataagag aaaaatgagc caacttttaa aaagagcttc aagacagacg
     1021 agcaggatgg atggtaaccc agcactgtca aaatcatgca agacagaaca tgagattcca
     1081 actctgccaa ccaagccatg ggatcctaga gtggagctac aggtggcttc cattagccat
     1141 gatgcaagtc aaatgcttcc attaatagag tgtggttctg cccaagtcca caatgacttg
     1201 tcaccttgtc ctcctctttg tcctcctccg catgctcttc tggacaagcc atggccttgc
     1261 tcatgcacac tggccaagca atctcctcat acctgtttgt ctgaggggtc agttagaagg
     1321 agaaactgga aggagaaatg gaatcacatg gacagactca agaacttgtc acacattgtg
     1381 agtaaaggac cagattcctt tgaaatggaa gaggtccaga gctttgaaga agacactggc
     1441 aaccctctta tcctgacatc aggaattgta ggcactcgag tggacagaac aaacagctgt
     1501 cagtctgata gcagtggatt tttagaagag ctaccagagc tccagcccct ccaggtgtct
     1561 tccatgacag gcagccagag tcctactgtc tgtagaggtt gcaaaccaag ggatcagagt
     1621 catagtccag catcacagca agactctctg caggagtcat atggctctaa atccaagagc
     1681 atgacaagct catctttgtt gagccaagat tggagtacat tggaagaaaa tgcttcagct
     1741 tctgtggtgg aggaggagct tcaactcaag gccatggaag agccaccaga aatagtcaac
     1801 ccagatatga ccctcatcaa gactatcatg gtgggagaac acccagagag tgttgctgga
     1861 cctgtggtca cttctacttc tacatgtaat aacacaatgg gggtcttggt gactcatgtc
     1921 acagaaaagg aagataggtc tgtaggccac aagggtactc gaaaaatgct gatacaaagg
     1981 caccactttg agtcaccaag gtcattcagg attgatcagc cttcagacaa tttctatcat
     2041 gtggactctg agatcaccaa aacagaggac aactgcaaag tctgccctga taccaagcaa
     2101 agctcactgg tgcaggagag gccagcacag cactctcacc agcacagagg agccatgccc
     2161 tataaaggcg accttgttca aacctctgaa aagtcaattc cccaccttga taagccacct
     2221 ggacatgttc ccactgactc aaatgctgcc agctcttggt ctgtgacaac ccagatgtcc
     2281 tccaatctgg tgtcagctgc tcagagggtt gcagacctag ggacctataa taaaggaaca
     2341 gcttttgaat gcactccatg tgaccctctt aataccacag acctaaaact gcagacagaa
     2401 acaaggcagg tcaaggatgt tgctgttcag acttatgcac atgaatgcaa gctcaggcca
     2461 tcacataatg acttcattca tgggcctcgg cccctcgcca aatccatctc tttggataca
     2521 ggttttccta gtatctccgc aacaggcttc tgccacacca tacctgccca ctgttgtgtc
     2581 tgctgtcatc actgccccaa ctgccaatgg aggaggcaaa gccctggccc agaaccctct
     2641 atttgcaggc attccctgta ttcacaagca gaggatccta aagtgcagtt catgaagaca
     2701 ttgaaaatac tccaagacac tactgtgagg gacctgtgtt cttgcacagt ctacgagatg
     2761 gaaaccatga agatggtgtg ccagagtttc cgggagcact tagaggaaat cgagcagcac
     2821 ttcatgggac agcaggcact ctatcccagg gacatgtcag aagaggaaag ggaagaggct
     2881 gagtacctga ggactttgcg agaagccctg aggcagcaag tggcagagct ggcctttcag
     2941 ttaggagaca gagccaggca aatcaaagaa gggatcctac tgcagctaga ccttctgtgt
     3001 gaggagctac ctgaacactg cgacaatctg ccacaatgca actggacaga aggaaagcat
     3061 ggccagagat catgtgttca aacccatgct gtggcccctg atcccaccct tcctgccagt
     3121 agtggccagt ggactccctg ctctgggatg actcagccag ttgctcttag tccctctcac
     3181 cttgagacca gaggagggat atctctacag tcaccagcta gggcagaatc aggtccgggt
     3241 ccttcactca gtcatgttgg agagaagtct ctgttagacc aaagtgggtt tgatgatctt
     3301 tgtacaaaat gcaatgtcca agagcagctt taacaaggga atccaaatcc tatgtagcct
     3361 aaaagctctg aatattttaa tattcattga ttgcatgcgc ccactatgta actgactgag
     3421 gtatattata gtcactgagt agcatatgat tgctatcctg atagagcatg tgtcctagtg
     3481 gaggatgaga aatgtttaaa catgcatatg tatctacaat gaaaaatcaa taaaaagaca
     3541 atgtggcctt attttatgaa aaataattat ctgagtctga tcaggtatct ggaaggcatg
     3601 tttggagatg ttggaggcat ctgtgagcaa gacagaatgt ctttccatca caagttagat
     3661 aacatgaggg aaacaagaca atgaataaat gctatttcca taaggca
//
