LOCUS       NM_153134               6159 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus immunity-related GTPase family, Q (Irgq), mRNA.
ACCESSION   NM_153134 XM_989003
VERSION     NM_153134.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6159)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6159)
  AUTHORS   Miyairi,I., Tatireddigari,V.R., Mahdi,O.S., Rose,L.A.,
            Belland,R.J., Lu,L., Williams,R.W. and Byrne,G.I.
  TITLE     The p47 GTPases Iigp2 and Irgb10 regulate innate immunity and
            inflammation to murine Chlamydia psittaci infection
  JOURNAL   J Immunol 179 (3), 1814-1824 (2007)
   PUBMED   17641048
REFERENCE   3  (bases 1 to 6159)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ128671.1 and BC080294.1.
            
            On Oct 3, 2008 this sequence version replaced NM_153134.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC056347.1, AK051117.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-62                CJ128671.1         2-63
            63-6159             BC080294.1         1-6097
FEATURES             Location/Qualifiers
     source          1..6159
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 11.32 cM"
     gene            1..6159
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /note="immunity-related GTPase family, Q"
                     /db_xref="GeneID:210146"
                     /db_xref="MGI:MGI:2667176"
     exon            1..257
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /inference="alignment:Splign:2.1.0"
     exon            258..789
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /inference="alignment:Splign:2.1.0"
     CDS             260..2011
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /note="immunity-related GTPase family, Q1"
                     /codon_start=1
                     /product="immunity-related GTPase family Q protein"
                     /protein_id="NP_694774.3"
                     /db_xref="CCDS:CCDS20953.1"
                     /db_xref="GeneID:210146"
                     /db_xref="MGI:MGI:2667176"
                     /translation="MPLPQGDVTALFLGPPGSGKSALIAALCGKNVDTVEIPDGRQDS
                     GVPSLRAAAPGLFLGELSCPPAAPGPWAAEANLLVLVLPGSEGSEEPLTPALGEAARA
                     ALARGTPLLAVRNLRPGDSQNAAKARDETAALLNSAGLGAAPLFVPPADCSSSDRCEE
                     LERLQVVLRTQAEALQRLLPPAQDGFEVLGAAELEAVREAFETGGLEAALSWVRAGLE
                     RLGSARLDLAVAGTTNVGLVLDMLLGLDPGDPGAAPASAPTGPTPYPAPERPNVVLWT
                     VPLGPTATSPAVTPHPTHYDALILVTPGAPTEENWAQVRSLVSPDAPLVGVRTDGQGE
                     DPPEVLEEEKAQNASDGNSGDARSEGKKAGIGDSGCTAARSPEDELWEVLEEAPPPVF
                     PMRPGGLPGLGTWLQHALPTAQAGALLLALPPASPRAARRKAAALRAGAWRPALLASL
                     AAAAAPVPGLGWACDVALLRGQLAEWRRALGLEPAAVARRERALGLAPGVLATRTRFP
                     GPVTRAEVEARLGSWAGEGTAGGAALSALSFLWPTGGAAATGGLGYRAAHGVLLQALD
                     EMLADAEAVLGPPEPNQ"
     exon            790..6124
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6104..6109
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /note="hexamer: AATAAA"
     polyA_site      6110
                     /gene="Irgq"
                     /gene_synonym="FKSG27; Irgq1"
                     /note="major polyA site"
ORIGIN      
        1 tttctgcgca cgcgcatggg ttttattgtg cctttgccca aacagcctta gctagaaaga
       61 aggagctgcc aaaaattctt cctctccgca gtggcactcc aagacacacc ggtcttggaa
      121 ggaatgacgt cagtatagag ccacctgaag gagtccggat gtttctaaat ccggacactc
      181 ctgccccttc agcctccgtc agctcgtctt aaggggctgg gcctctgtgc tctccaggcg
      241 tgtcacctct ctgatcgcaa tgcctctgcc tcagggtgac gtgactgcct tattcctggg
      301 gcctcccggc tcgggaaagt ccgccctgat cgccgcgtta tgcggtaaga atgtggacac
      361 ggtagagatt cccgatggac ggcaggactc tggagtcccc agcctgagag ctgcggctcc
      421 gggcctcttc ctgggtgagc tgagttgccc acccgcagct cccgggccct gggcggcgga
      481 ggccaacttg ctggtattgg tgctaccagg atctgagggg agcgaggagc ccttgacccc
      541 agctctggga gaggcagcgc gagccgccct ggctagagga accccgctgc tggctgtccg
      601 gaatctgcgc cctggagatt cccagaatgc agctaaagcc cgggatgaga ctgcagcctt
      661 gttgaacagt gctgggttag gagctgcgcc tctctttgtg ccgccggcgg attgcagcag
      721 cagtgaccgc tgcgaggagc tagagcgcct gcaggtggtg ctgcggaccc aggcggaggc
      781 gctgcagagg ctcctgcctc ctgcccagga tggcttcgag gtgttgggcg cagccgagct
      841 ggaagctgtt cgtgaggcct tcgagaccgg tggcctggag gcggcgctgt cgtgggtgcg
      901 cgctggtctg gagcgcctgg gcagcgcacg actggacttg gcggtggccg gcaccaccaa
      961 tgtaggcctt gtgctagata tgctgctggg gttggatcct ggagacccag gtgctgcgcc
     1021 tgcctcagca cccactgggc ccacccctta tcctgctcca gagcgcccca acgtagtgct
     1081 ctggaccgtt cccctgggcc ccacggccac atctcctgcc gtcacccctc acccaaccca
     1141 ctacgatgcc ctgatccttg tcacccccgg ggctcccaca gaggagaact gggcccaggt
     1201 ccgctcattg gtgtccccag atgctccact cgtcggtgtg cgcacggacg gccagggcga
     1261 agatccaccc gaggttctgg aagaagaaaa ggcccagaat gcaagtgatg ggaactcagg
     1321 ggatgcacgc agcgaaggaa agaaagctgg catcggggac tcggggtgca ctgccgctcg
     1381 gagcccggag gatgagctat gggaggtgct ggaggaggcg cctccgcccg tgttcccgat
     1441 gcggcccggc ggtctcccag gcctcggaac ctggctccag cacgcactgc ccacagctca
     1501 ggccggagct ctgctgctgg cgctgccacc tgcaagtccc cgggcggcgc ggaggaaggc
     1561 ggctgcgcta cgggcagggg cgtggaggcc agccctgttg gctagcctgg cggcggccgc
     1621 cgccccagta ccagggctgg gctgggcttg cgatgtggcg cttctccggg gacagctggc
     1681 cgagtggagg cgcgcgctag gcctcgaacc cgcggccgta gcacgacgtg agcgcgcctt
     1741 gggcctggct cccggagtac tggcaacgcg cacgcgcttc ccgggcccgg tgacgcgagc
     1801 cgaggtagag gccaggctgg ggtcctgggc aggtgagggc acggcgggag gtgcagcgtt
     1861 gagcgcgctc tccttcctat ggcccacggg tggtgctgcg gcaacaggtg ggctgggtta
     1921 ccgtgctgcg cacggtgtac ttctacaagc cttagatgag atgctggctg atgcggaggc
     1981 ggtgctggga cccccagagc ccaaccaatg aggtgtgcgg tggggcttgg ggtgtctggt
     2041 gactggtttt ggccccacag cctctgagat taagaagtga cgttttgtta ttcaaacccg
     2101 gagacttgaa ggagactgac atctcgttga aacgtgagat ttacagtcac ccgatttcct
     2161 aggtactgaa tgggagtagg gtctatgcgc cagaagtgtg tcatccagat accaatgcag
     2221 taaagggagt tgagggcctg ggactcagta gaaatgggag cttcttggcg tcccgctgac
     2281 acctggtcat ggatctctag aagccttgat ccctgcctgc ctgtgagcga aactgcgggg
     2341 agatagaagc cttggagtgc tggctcccaa aaggaaagaa gtataagtta cctgatgaaa
     2401 gaacagattt ttgtgggagc tgtgagagcc ttaggaaaag tctggttcct aagaaggctg
     2461 tggttgccat ttcttaggtg gcaggaagcc ctgtggagac caggggcctg ctggagaccc
     2521 tttagtctct tggagtgcag aagattgtca gtcatttgct ctccaaagct ttggtgtgga
     2581 cgataatgat ccacaacatt gaagggaagg gacaagggag tgtgtgggta aggttgtctt
     2641 ctgacagcta gagcctagga atggggtctt tagggtatgg aagattagaa acccacactt
     2701 ggaaatactt cccgtgggat cctggcagct gcctctccga gctttactgg gaaggtgtga
     2761 ctacccccat tttataggtg ctgggtgatt cagggtctct ggcatgcacg ctcctgtttc
     2821 tctttattac tggtttcttc tgtcatatgg accttaactg cagggcctca aagtgatggg
     2881 ctcctgctgt agcagtctat gtggtttttc tgcatgacct cttctgattt ctcccaagac
     2941 acctgctgct ggtccacata ggatgctgct gctgtgtgtg tgtgtgtgtg tgtgtgtgtg
     3001 tgtgtgtgtg tgtgtgtagg gggtccccct caggatagct aggtaggcct ttgatgccgt
     3061 gggaaagtgc ctggagggag gcataggcag aaaccacatc gctgtcagtt ttgtagcttt
     3121 gtgcaggtag gaccacgggg ttcagagatg caggccaaag gctcatcaac acagcgggac
     3181 agtgtgtggc ctggccctgc ctcttctcca ttttcagccc atctccagca agcctgatgc
     3241 caaggtccca cctcaggact tatgcatttt ctggttttct gtgggacact ctgcctccct
     3301 gtcttttttt gagatagggt cctcatctgt caggtctccc cgaaatggct ctatggtcac
     3361 ccaaagtagc ttgcattgat cctgccacat ggtagtccct gtagtgaaca ttactaccaa
     3421 tggctgtatt ctcattctct cacttgcctg ttcgttggct cttgctcctt gcttgtcttt
     3481 ctcttgggtg taccctagca cccagagcag tgcctgacac acagtaggtg cctagtattt
     3541 attttcttag tttactggtc actggcacat ggcctggaat tcaggttgtc ataatcttgt
     3601 tacaaagagg gagagaagca agcacctggt gggagagcga acggtagcag cagcttggcc
     3661 gctgtcacta catgaacgag ggccatgtat tttcacctgg tcgatgaaag gactgggcta
     3721 gacccataag agcttctgag ggctaatcag aagcctgcac agctgggctt tgctcccatc
     3781 taaccctgaa ctctcacctc tgacaccatc cgccctacga ggaggcacct tattcgggcg
     3841 ttcatgcctg taatccccgc acctccggtt gacacaggag aatttgaaat ttaaggcagt
     3901 cttcggtgag agaggattgc aggcctgtaa gctatgcgcc tgttcccact agagtctaga
     3961 cgggccttga actccacacg gtctggagcc agcctgatac taagtccttg atgcttgggt
     4021 tggccagctt tggccctgcc tcagcctccc cagtgccggg attatgactc taaaccatcc
     4081 tagatcagcc tgacactctt ttcactaaat catcagaacc aatgtgttcc tacacccaag
     4141 cacacctcat cacacaatac acctaattgg aaatacttga actgatcaat ggagggccca
     4201 attcacatac ccgtgtttca attatatcga taagttcccc ccaatcatgg ggttttgatc
     4261 agtgcctcac atattaaagg caaacactct gctggaacca tgtacctagc cctgtgctgg
     4321 gctgcaggta gggttctggg caggggctct accactgagc cacgccccca gcccctcact
     4381 gggggattct aggcaggggc tctaccactg agccacgccc ccagcccctc actgggggat
     4441 tctaggcagg ggctccacca ctgagctaca tcatatttca agacaaggtc tcactaagtt
     4501 gcttgggctg tccttgaact cactttattc cagacaggcc ttggaatttg ggatcctaac
     4561 ccctcagcct cccaagtaac tgggatcaca ggcctgcctc acctcctggc ttagtagttt
     4621 tccctgaacc tgtgatgttc cagtgggtca agtacaaata gaatctgaga tggatttccc
     4681 ccccccctcg gtggctttat ccacatactt ggatcatagt tcaacaatac agtctattgt
     4741 gaaaaatcat aacagcatga aagtgagaca ttgcaaccac atttgggaag ctgagaaatc
     4801 tttgtttcac cccaggacca cagcgctatg gaatagtgtt tcaaacagta ggtttcctcg
     4861 cctcatttaa catagtctag gcactcctcc acagccatgt ccagggtgaa cgtaaattct
     4921 gtcagttaat attaaccatc acagcaggca tctaagaact tgctctgtta catgtgcaca
     4981 tgtgtggcta agcatgcaca cactggcatg tgaatgtgct cacacacata cccagctccc
     5041 aggtactgca gccccctctg agaagcttga cactcaaatg ctactcctct actgcctggg
     5101 ccccacttcc cttggtctgg ctacagtaac agccaaactc ggtctcctat taagtgtcct
     5161 gagctctcta aaccctccat gtcttttctg gtattttgac atagcttagg cttgccttca
     5221 cctcggcatg tagctggtga tggccttgaa atcctgatcc tcctgcctgc atctctccag
     5281 tgccagggtc aggcacgtgg catgatgccc tgctctcact gtggcttgct ttggtgccac
     5341 ctggcatccc cgtcctgtgc tttgctgctc tcccttcttg aggcaggagg cccatgctag
     5401 atgcatcgaa ggagcatatt gtagccattg tgtgtgtcct ggtcagctcc ataaacttgt
     5461 acagggcact tttgtgtttt gtgattcctt gcccattttt gttctgttac ttgagataga
     5521 ggatccaggc tgtctcaaac acttggcgcc aggtgcttct ccggtcctag cctctccttg
     5581 tcctgggtta caggtagagg tggctgcctt ttaaactatg atctcccacc cccacccctg
     5641 agatagggcc ttactctaca gctctgggcg tctaaagagc tgggattaca ggtgtaaatg
     5701 actacatatg ttgcccatac aatcttttgt taggattttc aggcttttcc agaatgtaag
     5761 caaagcagat agccaggccc ctggaagcct ccaaatagga aaggttcagt ctccctcgtc
     5821 acaggccacc tgctgccagc agggtgctcc catgaggcac ctcgggtctg aaagagcctg
     5881 ggcgcaggaa ctctgggaaa tgtcagtcct ccatgctgga attgcagcta cacaatcttg
     5941 gcattgccct tgaaagacga gcaggtttca aacgttggtg aatggatgag gtgccctcct
     6001 caacatggag agagtctcac acttctggct catgaaggag ctgtctgttg gaatgtgggg
     6061 gacaaatctg tctggtaatc ctgtggtgtg ttttggaaaa aagaataaaa gggtaggaat
     6121 gctaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
