LOCUS       XM_036156347            1764 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus interferon regulatory factor 1 (Irf1),
            transcript variant X1, mRNA.
ACCESSION   XM_036156347
VERSION     XM_036156347.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..1764
                     /gene="Irf1"
                     /gene_synonym="Irf-1"
                     /note="interferon regulatory factor 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 4 ESTs, 214 long SRA reads, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 39 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:16362"
                     /db_xref="MGI:MGI:96590"
     CDS             154..891
                     /gene="Irf1"
                     /gene_synonym="Irf-1"
                     /codon_start=1
                     /product="interferon regulatory factor 1 isoform X1"
                     /protein_id="XP_036012240.1"
                     /db_xref="GeneID:16362"
                     /db_xref="MGI:MGI:96590"
                     /translation="MNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTRNQRKERKSKSS
                     RDTKSKTKRKLCGDVSPDTFSDGLSSSTLPDDHSSYTTQGYLGQDLDMERDITPALSP
                     CVVSSSLSEWHMQMDIIPDSTTDLYNLQVSPMPSTSEAATDEDEEGKIAEDLMKLFEQ
                     SEWQPTHIDGKGYLLNEPGTQLSSVYGDFSCKEEPEIDSPRGDIGIGIQHVFTEMKNM
                     DSIMWMDSLLGNSVRLPPSIQAIPCAP"
ORIGIN      
        1 catgccaatc actcgaatgc ggatgagacc ctggctagag atgcagatta attccaacca
       61 aatcccaggg ctgatctgga tcaataaagc cgatacaaag caggagaaaa agagccagat
      121 cccaagacat ggaaggcaaa cttccgttgt gccatgaact ccctgccaga catcgaggaa
      181 gtgaaggatc agagtaggaa caagggcagc tctgctgtgc gggtgtaccg gatgctgcca
      241 cccctcacca ggaaccagag gaaagagaga aagtccaagt ccagccgaga cactaagagc
      301 aaaaccaaga ggaagctgtg tggagatgtt agcccggaca ctttctctga tggactcagc
      361 agctctaccc tacctgatga ccacagcagt tacaccactc agggctacct gggtcaggac
      421 ttggatatgg aaagggacat aactccagca ctgtcaccgt gtgtcgtcag cagcagtctc
      481 tctgagtggc atatgcagat ggacattata ccagatagca ccactgatct gtataaccta
      541 caggtgtcac ccatgccttc cacctccgaa gccgcaacag acgaggatga ggaagggaag
      601 atagccgaag accttatgaa gctctttgaa cagtctgagt ggcagccgac acacatcgat
      661 ggcaagggat acttgctcaa tgagccaggg acccagctct cttctgtcta tggagacttc
      721 agctgcaaag aggaaccaga gattgacagc cctcgagggg acattgggat aggcatacaa
      781 catgtcttca cggagatgaa gaatatggac tccatcatgt ggatggacag cctgctgggc
      841 aactctgtga ggctgccgcc ctctattcag gccattcctt gtgcaccata gtttgggtct
      901 ctgacccgtt cttgccctcc tgagtgagtt aggccttggc atcatggtgg ctgtgataca
      961 aaaaaagcta gactcctgtg ggccccttga cacatggcaa agcatagtcc cactgcaaac
     1021 aggggaccat cctccttggg tcagtgggct ctcagggctt aggaggcaga gtctgagttt
     1081 tcttgtgagg tgaagctggc cctgactcct aggaagatgg attggggggt ctgaggtgta
     1141 aggcagaggc catggacagg agtcatcttc tagcttttta aaagccttgt tgcatagaga
     1201 gggtcttatc gctgggctgg ccctgagggg aatagaccag cgcccacaga agagcatagc
     1261 actggcccta gagctggctc tgtactagga gacaattgca ctaaatgagt cctattccca
     1321 aagaactgct gcccttccca accgagccct gggatggttc ccaagccagt gaaatgtgaa
     1381 gggaaaaaaa atggggtcct gtgaaggttg gctcccttag cctcagaggg aatctgcctc
     1441 actacctgct ccagctgtgg ggctcaggaa aaaaaaatgg cactttctct gtggactttg
     1501 ccacatttct gatcagaggt gtacactaac atttctcccc agtctaggcc tttgcattta
     1561 tttatatagt gccttgcctg gtgcctgctg tctcctcagg ccttggcagt cctcagcagg
     1621 cccagggaaa aggggggttg tgagcgcctt ggcgtgactc ttgactatct attagaaacg
     1681 ccacctaact gctaaatggt gtttggtcat gtggtggacc tgtgtaaata tgtatatttg
     1741 tctttttata aaaatttaag ttgt
//
