LOCUS       NM_001374605            1526 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus IQ motif containing K (Iqck), transcript variant 1,
            mRNA.
ACCESSION   NM_001374605 XM_006507981
VERSION     NM_001374605.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1526)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC138717.2 and AC151534.2.
            
            On Oct 7, 2019 this sequence version replaced XM_006507981.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189673.35669.1,
                                           SRR5189685.209304.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-210               AC138717.2         105657-105866
            211-284             AC138717.2         122726-122799
            285-414             AC138717.2         126147-126276
            415-512             AC138717.2         127505-127602
            513-565             AC151534.2         77122-77174
            566-643             AC151534.2         77301-77378
            644-728             AC151534.2         93003-93087
            729-840             AC151534.2         119077-119188
            841-1526            AC151534.2         148927-149612
FEATURES             Location/Qualifiers
     source          1..1526
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 63.67 cM"
     gene            1..1526
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /note="IQ motif containing K"
                     /db_xref="GeneID:434232"
                     /db_xref="MGI:MGI:3612188"
     exon            1..210
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             24..896
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="IQ domain-containing protein K isoform 1"
                     /protein_id="NP_001361534.1"
                     /db_xref="CCDS:CCDS90320.1"
                     /db_xref="GeneID:434232"
                     /db_xref="MGI:MGI:3612188"
                     /translation="MAAPRLVSSRSVLREEASGSADSPITTRTPVPAVSPGSPEVLVS
                     PPQVVEPPGKSLWDQICEEYEAEQPTFPEGYKVKQEAAVTVSSVTPLEELVPHGFNME
                     HYLPIHQFPAMPPVPCPPKKAETVEPKTCSPRDYLEMFIFPVLLPGMASLLHQAKREK
                     CFERKRTKFIACDFLTEWLYNQNPKRAGESFTEFFSIPFVEDWLKDHPRPPIPLSLLL
                     TEEEAAVRIQAFWRAYLVRCDPEIQELRQWQKKLREDKHIRQRVKIFWAKQEQKMKCK
                     MEDEEAPAASAPYP"
     exon            211..284
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            285..414
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            415..512
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            513..565
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            566..643
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            644..728
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            729..840
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            841..1526
                     /gene="Iqck"
                     /gene_synonym="A230094G09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggttgctgt agaaaccgcg tccatggcgg cgccgagact tgtatccagc cgcagcgtgc
       61 tgcgtgagga ggcgagcggc tccgcggatt cgccgatcac tacgcgcacg ccggtgcccg
      121 cagtgtcgcc cgggtctccc gaagtgctcg tgtcaccccc gcaggtcgtc gagccgccgg
      181 ggaagagcct atgggatcag atctgcgagg agtatgaagc tgagcagccg acctttccag
      241 aaggctataa agtgaagcag gaagctgcgg ttacagtgag ctcagtcacg cccttggagg
      301 aattggttcc tcatggcttc aacatggagc actacctccc aatacaccag ttcccagcga
      361 tgcctcctgt gccctgtcct cccaagaagg cagaaacagt cgagcccaag acctgttcac
      421 ccagagatta tctggaaatg ttcatctttc cagttctgct ccctggaatg gccagcctgc
      481 ttcaccaagc aaagagagaa aaatgttttg agaggaagag aaccaaattc attgcctgcg
      541 atttcctgac tgagtggctg tacaaccaga atccgaagag ggcaggggag tcattcacag
      601 aattcttctc cattccattt gtggaagact ggctcaagga ccacccgcgg ccaccaattc
      661 cactctccct gctactgaca gaagaagaag cagcagtcag gatccaggcc ttctggagag
      721 cctatctggt tcgctgtgac cctgagattc aggagctgcg gcagtggcag aagaagctgc
      781 gcgaggacaa gcacatccgc cagcgggtga agatcttctg ggccaagcag gagcagaaaa
      841 tgaaatgtaa aatggaggac gaggaagcac cggctgcctc agcaccatat ccttagccga
      901 cgtcagttgc tccgtatgga aggatgatgt atccagtctg tactttccct agtacggtgt
      961 ctttaacaag ccttagtgtg gtggatacag aaccctttga acgtgaggag ggatttgttg
     1021 ccgagaagcc aaagcacttt agcttcctgc ctgaccccaa atcctctcca cggtgtcagc
     1081 aacatcctct gagctgtcac tattggcatg cctcgtgacc gtgtcctctg acaccagtgt
     1141 tcccactttt gccaagatcc ctattttaac ttacctccga tctctgtgtt gttttgcctt
     1201 ggttttgggg tgttggggta accagtgggg ccaaggctct agcactgagt tgtttccagc
     1261 ccaataagag gcagttgtca gaaaggattt ccattgttaa agccccaaag tattacagca
     1321 gtgccctatt aacttaatgg tcccattggt tctgtggctg ctgctcgcca ggattctccc
     1381 atttaaaatg cccagacgtg gctgaaagcc tcctcagtag tatctgactg acaagctacc
     1441 acgcatctta ggtaaatagt aaagccttta ttttcttgtt aagaacagca ttttgaaaat
     1501 aaaacctatc tgcccatgct taacaa
//
